Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_012860

Experiment: 4-Hydroxybenzoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoate (C)
2,828,289	-				-1.0
2,828,293	+				+0.0
2,828,293	+				+1.1
2,828,297	+				-0.5
2,828,301	-				+0.6
2,828,301	-				-3.5
2,828,306	-				+0.6
2,828,330	+				-2.2
2,828,340	-				-0.1
2,828,340	-				-1.3
2,828,346	-				-1.9
2,828,353	+				+0.7
2,828,359	-				-0.2
2,828,363	-				-1.5
2,828,365	+				+0.8
2,828,371	-				-0.9
2,828,373	-				-1.0
2,828,375	-				-0.2
2,828,375	-				-0.5
2,828,377	+				+0.7
2,828,380	-				+0.3
2,828,395	-				+2.0
2,828,397	+				+0.6
2,828,402	-				+0.5
2,828,415	+				+0.0
2,828,415	+				-0.4
2,828,415	+				-0.0
2,828,415	+				+0.1
2,828,417	+				-3.4
2,828,423	-				-1.9
2,828,423	-				-0.7
2,828,423	-				-0.5
2,828,425	-				-0.3
2,828,428	-				-0.1
2,828,478	+				+0.0
2,828,478	+				+0.4
2,828,508	+				+1.1
2,828,508	+				+0.2
2,828,526	-				+0.0
2,828,547	+				+2.1
2,828,573	+				-0.4
2,828,577	+				+0.8
2,828,583	+				-1.3
2,828,583	+				+0.5
2,828,583	+				+0.1
2,828,591	-				-0.6
2,828,591	-				-1.8
2,828,591	-				+0.4
2,828,591	-				+0.2
2,828,615	-				+0.6
2,828,615	-				+0.1
2,828,618	-				-0.7
2,828,618	-				-0.2
2,828,660	+				+0.4
2,828,665	+				+0.1
2,828,672	+				-0.6
2,828,673	-				-0.9
2,828,695	+				+0.4
2,828,700	+				+0.2
2,828,708	-		TX73_012855	0.10	-1.3
2,828,719	+		TX73_012855	0.12	+0.2
2,828,767	+		TX73_012855	0.21	-1.4
2,828,774	-		TX73_012855	0.23	-0.4
2,828,775	-		TX73_012855	0.23	-0.4
2,828,795	-		TX73_012855	0.27	-0.2
2,828,805	+		TX73_012855	0.29	-1.7
2,828,813	-		TX73_012855	0.30	-0.3
2,828,834	-		TX73_012855	0.34	-2.3
2,828,908	-		TX73_012855	0.48	-0.7
2,828,908	-		TX73_012855	0.48	+0.1
2,828,917	+		TX73_012855	0.50	-1.0
2,828,917	+		TX73_012855	0.50	-1.5
2,828,922	+		TX73_012855	0.51	-1.2
2,828,922	+		TX73_012855	0.51	+0.6
2,828,922	+		TX73_012855	0.51	-0.2
2,828,925	-		TX73_012855	0.51	-1.0
2,828,950	-		TX73_012855	0.56	+0.1
2,828,994	-		TX73_012855	0.64	-2.0
2,829,040	-		TX73_012855	0.73	+0.9
2,829,040	-		TX73_012855	0.73	-1.7
2,829,040	-		TX73_012855	0.73	+0.1
2,829,077	-		TX73_012855	0.80	+0.4
2,829,103	+		TX73_012855	0.85	-1.5
2,829,103	+		TX73_012855	0.85	-0.6
2,829,105	-		TX73_012855	0.85	+2.4
2,829,111	-		TX73_012855	0.86	-0.7
2,829,111	-		TX73_012855	0.86	-0.2
2,829,132	+				-1.0
2,829,140	-				-2.4
2,829,140	-				-1.2
2,829,153	-				+0.4
2,829,178	+				-0.7
2,829,185	-				+1.3
2,829,244	-				-0.5
2,829,272	+				-0.8
2,829,280	-				-0.5
2,829,293	+				+1.1
2,829,295	+				+1.4
2,829,295	+				-0.4
2,829,295	+				+0.9
2,829,303	-				-0.3
2,829,334	-				+2.7
2,829,410	+		TX73_012860	0.14	-0.5
2,829,415	+		TX73_012860	0.15	-1.3
2,829,415	+		TX73_012860	0.15	-0.3
2,829,415	+		TX73_012860	0.15	-1.6
2,829,418	-		TX73_012860	0.15	-0.6
2,829,423	-		TX73_012860	0.16	-1.5
2,829,425	-		TX73_012860	0.16	-1.0
2,829,452	-		TX73_012860	0.18	+1.0
2,829,476	+		TX73_012860	0.21	-0.6
2,829,569	+		TX73_012860	0.30	-0.5
2,829,584	-		TX73_012860	0.32	-0.9
2,829,584	-		TX73_012860	0.32	-1.0
2,829,584	-		TX73_012860	0.32	+0.4
2,829,610	-		TX73_012860	0.34	-0.4
2,829,628	+		TX73_012860	0.36	-1.0
2,829,724	+		TX73_012860	0.46	+1.2
2,829,724	+		TX73_012860	0.46	-0.8
2,829,724	+		TX73_012860	0.46	+0.6
2,829,727	-		TX73_012860	0.46	+0.7
2,829,732	-		TX73_012860	0.47	+0.4
2,829,732	-		TX73_012860	0.47	+0.3
2,829,732	-		TX73_012860	0.47	+0.1
2,829,836	+		TX73_012860	0.57	+0.1
2,829,846	-		TX73_012860	0.58	-0.1
2,829,847	+		TX73_012860	0.58	-0.2
2,829,859	+		TX73_012860	0.60	+1.3
2,829,859	+		TX73_012860	0.60	+0.6
2,829,859	+		TX73_012860	0.60	-1.2
2,829,859	+		TX73_012860	0.60	+1.9
2,829,867	-		TX73_012860	0.60	-1.0
2,829,867	-		TX73_012860	0.60	+0.8
2,829,868	-		TX73_012860	0.61	+1.1
2,829,870	+		TX73_012860	0.61	-1.9
2,829,885	+		TX73_012860	0.62	+0.9
2,829,886	-		TX73_012860	0.62	+0.2
2,829,895	+		TX73_012860	0.63	+1.4
2,829,904	+		TX73_012860	0.64	+0.1
2,829,904	+		TX73_012860	0.64	-1.5
2,829,922	+		TX73_012860	0.66	-0.1
2,829,982	+		TX73_012860	0.72	-0.7
2,829,990	-		TX73_012860	0.73	-0.4
2,829,990	-		TX73_012860	0.73	+0.9
2,829,992	-		TX73_012860	0.73	-2.7
2,830,010	+		TX73_012860	0.75	+0.0
2,830,017	+		TX73_012860	0.76	-0.2
2,830,025	-		TX73_012860	0.76	+0.6
2,830,054	+		TX73_012860	0.79	+1.0
2,830,062	-		TX73_012860	0.80	-0.1
2,830,063	-		TX73_012860	0.80	-0.2
2,830,076	+		TX73_012860	0.82	-1.1
2,830,093	+		TX73_012860	0.83	+0.5
2,830,120	+		TX73_012860	0.86	-1.5
2,830,135	-		TX73_012860	0.87	+0.1
2,830,146	-		TX73_012860	0.89	-0.7
2,830,156	-		TX73_012860	0.90	+0.2
2,830,159	+		TX73_012860	0.90	-0.0
2,830,262	-				+1.5
2,830,272	+				+1.0
2,830,272	-				-0.8
2,830,272	-				+0.4
2,830,272	-				+0.2
2,830,282	+				-0.1
2,830,315	-				+1.2
2,830,360	-				-0.3
2,830,370	+				-1.4
2,830,395	-				+0.3
2,830,400	-				+1.2
2,830,432	-				+0.4
2,830,450	-				+1.2
2,830,505	-		TX73_012865	0.18	+1.0
2,830,507	+		TX73_012865	0.19	+0.8
2,830,520	-		TX73_012865	0.21	-1.4
2,830,525	+		TX73_012865	0.22	+1.1
2,830,534	+		TX73_012865	0.24	+0.1
2,830,534	+		TX73_012865	0.24	+1.0
2,830,542	-		TX73_012865	0.25	+0.7
2,830,565	+		TX73_012865	0.29	-0.4
2,830,566	-		TX73_012865	0.29	+0.8
2,830,573	-		TX73_012865	0.31	+0.3
2,830,573	-		TX73_012865	0.31	-0.0
2,830,598	-		TX73_012865	0.35	-0.9
2,830,611	+		TX73_012865	0.38	+0.9
2,830,635	+		TX73_012865	0.42	+0.4
2,830,635	+		TX73_012865	0.42	-0.1
2,830,635	+		TX73_012865	0.42	-3.8
2,830,638	-		TX73_012865	0.43	+0.7
2,830,643	-		TX73_012865	0.44	-0.4
2,830,643	-		TX73_012865	0.44	-0.1
2,830,643	-		TX73_012865	0.44	-0.7
2,830,643	-		TX73_012865	0.44	-0.8
2,830,643	-		TX73_012865	0.44	-0.2
2,830,658	-		TX73_012865	0.46	+1.8
2,830,665	+		TX73_012865	0.48	+0.6
2,830,731	-		TX73_012865	0.60	+0.1
2,830,751	-		TX73_012865	0.63	-0.0
2,830,751	-		TX73_012865	0.63	+0.7
2,830,778	+		TX73_012865	0.68	+1.5
2,830,786	-		TX73_012865	0.70	-2.3
2,830,860	+		TX73_012865	0.83	-3.1
2,830,880	+		TX73_012865	0.87	+0.6
2,830,938	-				-0.3
2,830,948	-				-0.9
2,831,015	+				+0.0
2,831,015	+				-1.6
2,831,015	+				+1.2
2,831,047	+				+0.3
2,831,047	+				+1.3
2,831,055	-				-0.3
2,831,088	+				+0.0
2,831,096	-				+0.1
2,831,096	-				-1.3
2,831,121	-				+1.1
2,831,211	+				-2.9
2,831,225	+				-1.1
2,831,240	-				-0.1