Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_015805

Experiment: NFM with pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM with pyruvate
3,456,734	+				-0.7
3,456,768	+				+0.7
3,456,768	+				-1.0
3,456,768	+				-2.5
3,456,768	+				-0.0
3,456,768	+				+3.6
3,456,776	-				-0.1
3,456,776	-				+0.6
3,456,776	-				+1.1
3,456,776	-				+0.2
3,456,836	-				+0.4
3,456,851	+				-1.8
3,456,851	+				+0.7
3,456,859	-				+0.2
3,456,861	+				-0.8
3,456,892	+				+0.9
3,456,895	+				-0.8
3,456,895	+				-0.0
3,456,903	-				-0.6
3,456,916	-				+1.4
3,456,988	+		TX73_015800	0.15	+1.4
3,456,989	+		TX73_015800	0.15	+2.8
3,456,993	+		TX73_015800	0.16	-0.3
3,456,993	+		TX73_015800	0.16	-1.4
3,456,993	+		TX73_015800	0.16	-0.2
3,456,993	+		TX73_015800	0.16	-0.2
3,456,993	+		TX73_015800	0.16	-0.6
3,457,001	-		TX73_015800	0.17	-1.2
3,457,001	-		TX73_015800	0.17	-0.6
3,457,001	-		TX73_015800	0.17	+0.6
3,457,001	-		TX73_015800	0.17	-1.2
3,457,001	-		TX73_015800	0.17	-0.1
3,457,001	-		TX73_015800	0.17	+0.1
3,457,024	-		TX73_015800	0.20	-0.1
3,457,024	-		TX73_015800	0.20	+0.7
3,457,026	-		TX73_015800	0.20	+1.0
3,457,048	-		TX73_015800	0.23	+1.6
3,457,058	-		TX73_015800	0.24	+0.0
3,457,058	-		TX73_015800	0.24	+0.1
3,457,089	-		TX73_015800	0.28	-0.4
3,457,090	-		TX73_015800	0.28	+0.7
3,457,092	+		TX73_015800	0.29	+1.2
3,457,123	-		TX73_015800	0.33	+1.0
3,457,141	+		TX73_015800	0.35	+2.0
3,457,159	+		TX73_015800	0.37	-0.5
3,457,159	+		TX73_015800	0.37	+1.7
3,457,175	+		TX73_015800	0.39	-1.5
3,457,175	+		TX73_015800	0.39	+0.8
3,457,175	+		TX73_015800	0.39	-0.6
3,457,180	+		TX73_015800	0.40	+0.0
3,457,192	+		TX73_015800	0.42	-1.4
3,457,192	+		TX73_015800	0.42	-2.4
3,457,200	-		TX73_015800	0.43	+1.4
3,457,225	-		TX73_015800	0.46	-0.5
3,457,241	-		TX73_015800	0.48	+0.2
3,457,277	-		TX73_015800	0.53	-0.7
3,457,298	+		TX73_015800	0.55	+0.1
3,457,329	+		TX73_015800	0.59	+0.1
3,457,379	+		TX73_015800	0.66	-0.8
3,457,385	-		TX73_015800	0.67	+2.0
3,457,385	-		TX73_015800	0.67	+0.4
3,457,387	-		TX73_015800	0.67	+2.2
3,457,416	+		TX73_015800	0.71	+0.1
3,457,454	+		TX73_015800	0.75	+1.0
3,457,454	+		TX73_015800	0.75	+0.6
3,457,454	+		TX73_015800	0.75	-0.5
3,457,456	-		TX73_015800	0.76	+1.2
3,457,470	+		TX73_015800	0.78	+1.6
3,457,499	+		TX73_015800	0.81	+0.2
3,457,549	-		TX73_015800	0.88	+1.7
3,457,560	+		TX73_015800	0.89	+0.4
3,457,560	+		TX73_015800	0.89	-0.3
3,457,568	-				+0.3
3,457,571	+				+2.2
3,457,579	+				-0.1
3,457,581	+				-0.4
3,457,589	-				-0.0
3,457,598	+				+0.4
3,457,606	-				-0.8
3,457,608	+				+1.4
3,457,608	+				-2.4
3,457,608	+				+1.2
3,457,608	+				-0.9
3,457,616	-				+1.5
3,457,616	-				-0.1
3,457,616	-				+0.3
3,457,638	+				-0.9
3,457,638	+				+0.2
3,457,644	-				+1.7
3,457,646	-				+0.6
3,457,647	-				-0.2
3,457,649	+				-1.7
3,457,649	+				-0.4
3,457,657	-				+1.2
3,457,657	-				-0.5
3,457,807	+				+0.5
3,457,809	+		TX73_015805	0.10	+0.9
3,457,844	+		TX73_015805	0.14	-0.4
3,457,848	-		TX73_015805	0.15	+0.9
3,457,849	-		TX73_015805	0.15	+1.5
3,457,923	+		TX73_015805	0.24	+0.3
3,457,929	+		TX73_015805	0.25	-0.0
3,457,984	+		TX73_015805	0.31	-1.4
3,457,987	-		TX73_015805	0.32	-1.0
3,457,992	-		TX73_015805	0.32	+0.3
3,457,992	-		TX73_015805	0.32	-0.5
3,458,010	+		TX73_015805	0.35	+0.6
3,458,069	-		TX73_015805	0.42	+0.3
3,458,071	-		TX73_015805	0.42	+0.4
3,458,108	+		TX73_015805	0.46	-2.2
3,458,118	+		TX73_015805	0.48	-1.2
3,458,160	-		TX73_015805	0.53	+1.0
3,458,202	-		TX73_015805	0.58	-0.1
3,458,215	-		TX73_015805	0.59	+0.8
3,458,231	-		TX73_015805	0.61	-1.9
3,458,244	-		TX73_015805	0.63	-1.9
3,458,252	+		TX73_015805	0.64	-2.1
3,458,262	+		TX73_015805	0.65	+1.0
3,458,262	+		TX73_015805	0.65	-1.0
3,458,262	+		TX73_015805	0.65	-0.6
3,458,272	+		TX73_015805	0.66	+0.1
3,458,280	-		TX73_015805	0.67	-1.0
3,458,280	-		TX73_015805	0.67	+0.2
3,458,284	-		TX73_015805	0.68	+1.3
3,458,312	+		TX73_015805	0.71	-0.2
3,458,322	+		TX73_015805	0.73	-0.0
3,458,322	+		TX73_015805	0.73	+0.1
3,458,330	-		TX73_015805	0.73	-0.0
3,458,330	-		TX73_015805	0.73	-0.2
3,458,330	-		TX73_015805	0.73	-2.0
3,458,330	-		TX73_015805	0.73	-1.3
3,458,330	-		TX73_015805	0.73	-0.8
3,458,330	-		TX73_015805	0.73	-0.8
3,458,365	-		TX73_015805	0.78	-0.1
3,458,378	-		TX73_015805	0.79	+1.1
3,458,378	-		TX73_015805	0.79	-1.1
3,458,378	-		TX73_015805	0.79	-0.6
3,458,429	-		TX73_015805	0.86	+0.5
3,458,491	-				+1.1
3,458,542	+				-0.4
3,458,545	-				+1.6
3,458,625	-				-0.7
3,459,064	+				-0.6
3,459,087	+				-0.6
3,459,113	-				+0.2
3,459,115	+				+0.1
3,459,129	+				-0.7
3,459,134	+				+0.5
3,459,134	+				+0.1
3,459,134	+				-1.3
3,459,134	+				+2.4
3,459,142	-				+0.3
3,459,142	-				+1.2
3,459,147	-				+4.0
3,459,147	-				+0.6
3,459,152	-				-1.1
3,459,198	-				-0.7
3,459,215	-				-0.8
3,459,252	+				+0.5
3,459,262	+				-0.6
3,459,349	+				-0.8
3,459,399	-		TX73_015815	0.11	+0.5
3,459,405	+		TX73_015815	0.12	+0.6
3,459,405	+		TX73_015815	0.12	+0.8
3,459,413	-		TX73_015815	0.12	-1.3
3,459,423	-		TX73_015815	0.12	-0.2
3,459,433	+		TX73_015815	0.13	-0.2
3,459,433	+		TX73_015815	0.13	-0.1
3,459,436	-		TX73_015815	0.13	+0.7
3,459,436	-		TX73_015815	0.13	+0.5
3,459,468	+		TX73_015815	0.15	+0.1
3,459,468	+		TX73_015815	0.15	+0.6
3,459,508	-		TX73_015815	0.17	+1.0
3,459,524	-		TX73_015815	0.18	-1.8