Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011740

Experiment: NFM with pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM with pyruvate
2,569,912	+		TX73_011730	0.53	-0.8
2,569,921	-		TX73_011730	0.55	+0.6
2,569,931	-		TX73_011730	0.57	-1.8
2,569,981	+		TX73_011730	0.68	-0.4
2,569,989	-		TX73_011730	0.70	-0.3
2,569,995	+		TX73_011730	0.72	-0.4
2,570,013	-		TX73_011730	0.76	+1.3
2,570,040	-		TX73_011730	0.82	-1.5
2,570,064	-		TX73_011730	0.87	+0.4
2,570,072	-		TX73_011730	0.89	+0.2
2,570,127	-				-0.1
2,570,219	-				-1.1
2,570,268	+		TX73_011735	0.13	-0.3
2,570,273	+		TX73_011735	0.14	-1.1
2,570,383	+		TX73_011735	0.33	-0.6
2,570,383	+		TX73_011735	0.33	-0.8
2,570,393	+		TX73_011735	0.35	-0.6
2,570,401	+		TX73_011735	0.37	-0.8
2,570,411	-		TX73_011735	0.38	+0.9
2,570,500	+		TX73_011735	0.54	-0.3
2,570,509	-		TX73_011735	0.56	+0.8
2,570,652	-		TX73_011735	0.81	-1.5
2,570,675	+		TX73_011735	0.85	-1.2
2,570,702	-				-1.6
2,570,745	+				+0.8
2,570,802	+				-0.2
2,570,802	+				+1.9
2,570,807	+				+0.2
2,570,810	-				+0.2
2,570,849	-				+0.1
2,570,865	+				-0.0
2,570,865	+				-0.6
2,570,945	-				-0.6
2,570,994	-		TX73_011740	0.11	-0.2
2,571,026	-		TX73_011740	0.12	-0.6
2,571,027	+		TX73_011740	0.12	-1.9
2,571,057	-		TX73_011740	0.14	-0.5
2,571,086	+		TX73_011740	0.16	-1.5
2,571,094	-		TX73_011740	0.16	-1.7
2,571,124	+		TX73_011740	0.18	+1.0
2,571,222	-		TX73_011740	0.23	+0.9
2,571,222	-		TX73_011740	0.23	+0.5
2,571,296	+		TX73_011740	0.27	-0.3
2,571,435	+		TX73_011740	0.35	+1.2
2,571,457	+		TX73_011740	0.36	+0.9
2,571,462	+		TX73_011740	0.36	-0.7
2,571,462	+		TX73_011740	0.36	-0.8
2,571,462	+		TX73_011740	0.36	-0.4
2,571,462	+		TX73_011740	0.36	-1.0
2,571,462	+		TX73_011740	0.36	+0.3
2,571,465	-		TX73_011740	0.37	+1.1
2,571,470	-		TX73_011740	0.37	-0.8
2,571,470	-		TX73_011740	0.37	-0.9
2,571,470	-		TX73_011740	0.37	-1.3
2,571,470	-		TX73_011740	0.37	-0.6
2,571,470	-		TX73_011740	0.37	+1.1
2,571,487	+		TX73_011740	0.38	+1.0
2,571,495	-		TX73_011740	0.38	-1.0
2,571,516	+		TX73_011740	0.39	+3.0
2,571,529	+		TX73_011740	0.40	+0.7
2,571,537	-		TX73_011740	0.41	+0.1
2,571,549	-		TX73_011740	0.41	-0.1
2,571,666	+		TX73_011740	0.48	-0.7
2,571,666	+		TX73_011740	0.48	+0.4
2,571,674	-		TX73_011740	0.48	+0.7
2,571,676	+		TX73_011740	0.48	+1.3
2,571,733	-		TX73_011740	0.52	-2.3
2,571,734	-		TX73_011740	0.52	+0.5
2,571,739	+		TX73_011740	0.52	+0.7
2,571,757	+		TX73_011740	0.53	-0.5
2,571,794	-		TX73_011740	0.55	-0.7
2,571,806	+		TX73_011740	0.56	+0.2
2,571,806	+		TX73_011740	0.56	+1.7
2,571,806	+		TX73_011740	0.56	-2.1
2,571,814	-		TX73_011740	0.56	+0.5
2,571,867	-		TX73_011740	0.59	+1.3
2,571,946	+		TX73_011740	0.63	-0.1
2,571,984	-		TX73_011740	0.65	+0.8
2,572,002	+		TX73_011740	0.66	-1.0
2,572,005	-		TX73_011740	0.67	-0.1
2,572,060	-		TX73_011740	0.70	-0.2
2,572,082	-		TX73_011740	0.71	+1.7
2,572,161	-		TX73_011740	0.75	-2.2
2,572,172	+		TX73_011740	0.76	+0.0
2,572,177	+		TX73_011740	0.76	+0.1
2,572,185	-		TX73_011740	0.77	-0.4
2,572,225	+		TX73_011740	0.79	+0.9
2,572,233	-		TX73_011740	0.79	-0.0
2,572,259	-		TX73_011740	0.81	-0.5
2,572,259	-		TX73_011740	0.81	+0.9
2,572,259	-		TX73_011740	0.81	+1.6
2,572,271	-		TX73_011740	0.81	+1.3
2,572,271	-		TX73_011740	0.81	-0.5
2,572,317	+		TX73_011740	0.84	+1.2
2,572,325	-		TX73_011740	0.84	-0.4
2,572,396	+		TX73_011740	0.88	-0.3
2,572,411	+		TX73_011740	0.89	+0.3
2,572,414	-		TX73_011740	0.89	+0.3
2,572,419	-		TX73_011740	0.90	+0.3
2,572,419	-		TX73_011740	0.90	-2.3
2,572,424	-		TX73_011740	0.90	-0.1
2,572,424	-		TX73_011740	0.90	-0.6
2,572,433	+				-1.2
2,572,433	+				-0.2
2,572,441	-				-2.5
2,572,463	-				+1.1
2,572,463	-				-1.5
2,572,463	-				-0.4
2,572,503	+				+1.5
2,572,503	+				+0.6
2,572,503	+				-1.1
2,572,503	+				-0.9
2,572,568	-				-2.0
2,572,579	-				-2.1
2,572,591	+				-2.1
2,572,604	-				-1.1
2,572,616	+				-0.6
2,572,624	-				-1.4
2,572,624	-				-2.0
2,572,660	-				-0.6
2,572,677	+				+0.4
2,572,695	-				+0.9
2,572,702	-				-2.0
2,572,707	-				-2.7
2,572,889	+				-0.5
2,572,934	-		TX73_011745	0.14	-0.4
2,572,942	-		TX73_011745	0.15	+0.3
2,572,942	-		TX73_011745	0.15	+1.3
2,572,972	+		TX73_011745	0.18	-2.2
2,572,992	-		TX73_011745	0.20	-0.6
2,573,010	-		TX73_011745	0.22	+0.2
2,573,025	-		TX73_011745	0.24	+0.7
2,573,025	-		TX73_011745	0.24	-0.9
2,573,050	+		TX73_011745	0.26	-1.0
2,573,058	-		TX73_011745	0.27	-1.5
2,573,063	-		TX73_011745	0.28	-1.0
2,573,068	-		TX73_011745	0.28	-0.8
2,573,077	+		TX73_011745	0.29	-0.1
2,573,079	+		TX73_011745	0.29	+0.3
2,573,079	+		TX73_011745	0.29	-0.5
2,573,079	+		TX73_011745	0.29	+0.7
2,573,087	-		TX73_011745	0.30	+1.3
2,573,087	-		TX73_011745	0.30	-0.8
2,573,089	+		TX73_011745	0.30	+0.5
2,573,089	+		TX73_011745	0.30	+1.1
2,573,097	-		TX73_011745	0.31	+1.2
2,573,097	-		TX73_011745	0.31	+0.3
2,573,129	+		TX73_011745	0.34	-1.1
2,573,137	-		TX73_011745	0.35	-1.1
2,573,185	+		TX73_011745	0.40	-2.0
2,573,206	+		TX73_011745	0.42	+0.7
2,573,217	+		TX73_011745	0.44	-0.1
2,573,217	+		TX73_011745	0.44	-2.3
2,573,225	-		TX73_011745	0.44	+0.2
2,573,251	+		TX73_011745	0.47	-0.9
2,573,296	+		TX73_011745	0.52	+1.1
2,573,296	+		TX73_011745	0.52	+0.5
2,573,296	+		TX73_011745	0.52	-0.8
2,573,304	-		TX73_011745	0.52	-1.3
2,573,304	-		TX73_011745	0.52	+1.6
2,573,304	-		TX73_011745	0.52	+0.3
2,573,329	+		TX73_011745	0.55	+0.6
2,573,360	-		TX73_011745	0.58	-1.7
2,573,381	-		TX73_011745	0.60	+0.2
2,573,391	+		TX73_011745	0.61	+0.3
2,573,391	+		TX73_011745	0.61	-0.1
2,573,447	+		TX73_011745	0.67	-0.4
2,573,455	+		TX73_011745	0.68	+0.4
2,573,460	+		TX73_011745	0.69	-0.1
2,573,561	+		TX73_011745	0.79	+1.6
2,573,562	-		TX73_011745	0.79	+1.2
2,573,579	-		TX73_011745	0.81	-0.2