Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017380

Experiment: NFM with pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM with pyruvate
3,805,513	-				-1.3
3,805,513	-				-2.1
3,805,514	+				-1.5
3,805,519	+				+0.2
3,805,519	+				+0.5
3,805,519	+				-2.3
3,805,519	+				+0.5
3,805,527	-				+0.5
3,805,527	-				-1.0
3,805,529	+				-1.3
3,805,532	-				+0.9
3,805,537	-				-0.1
3,805,537	-				+0.8
3,805,555	+				+0.2
3,805,555	-				+0.2
3,805,587	+				+2.0
3,805,595	-				+0.9
3,805,609	+				+0.4
3,805,745	-		TX73_017375	0.17	-1.4
3,805,747	-		TX73_017375	0.18	-3.3
3,805,769	-		TX73_017375	0.26	-0.6
3,805,782	+		TX73_017375	0.30	-2.1
3,805,790	-		TX73_017375	0.33	-1.0
3,805,817	-		TX73_017375	0.43	-1.1
3,805,828	-		TX73_017375	0.47	-0.7
3,805,831	-		TX73_017375	0.48	-1.2
3,805,848	-		TX73_017375	0.54	-2.6
3,805,861	+		TX73_017375	0.59	-2.3
3,805,890	+		TX73_017375	0.69	-0.2
3,805,898	-		TX73_017375	0.72	+1.2
3,805,900	+		TX73_017375	0.72	-0.4
3,805,929	-		TX73_017375	0.83	-2.0
3,805,957	-				+0.4
3,806,025	+				+1.2
3,806,033	-				-0.7
3,806,038	-				+1.5
3,806,039	-				-1.4
3,806,039	-				-0.3
3,806,039	-				-0.2
3,806,039	-				-1.0
3,806,070	+				+1.2
3,806,070	-				+0.7
3,806,072	+				-0.6
3,806,079	-				-2.1
3,806,092	-				+0.4
3,806,119	-				+0.7
3,806,119	-				+0.0
3,806,119	-				-0.7
3,806,138	-				-1.1
3,806,142	-				-0.4
3,806,189	+				+0.9
3,806,197	-				-0.2
3,806,202	-				+1.1
3,806,205	-				-1.4
3,806,208	+				+0.4
3,806,255	+				-0.2
3,806,263	-				-1.5
3,806,265	-				-0.6
3,806,272	+				-1.4
3,806,341	+				+0.3
3,806,352	+				+0.1
3,806,392	+				-0.2
3,806,409	-				-0.8
3,806,409	-				-1.2
3,806,411	+				+1.0
3,806,416	+				+0.2
3,806,421	+				-1.9
3,806,431	+				-0.6
3,806,431	+				-1.1
3,806,431	+				-0.5
3,806,431	+				-0.3
3,806,431	+				+0.6
3,806,433	+				+1.1
3,806,439	-				+1.7
3,806,439	-				-0.2
3,806,439	-				+2.3
3,806,439	-				+2.0
3,806,452	+				+0.2
3,806,484	-				+0.1
3,806,484	-				+0.6
3,806,553	-		TX73_017380	0.13	+1.0
3,806,553	-		TX73_017380	0.13	+1.4
3,806,553	-		TX73_017380	0.13	+0.4
3,806,598	+		TX73_017380	0.23	+0.4
3,806,603	+		TX73_017380	0.24	+0.5
3,806,616	+		TX73_017380	0.27	-1.4
3,806,632	+		TX73_017380	0.30	+1.6
3,806,642	+		TX73_017380	0.32	+0.1
3,806,689	+		TX73_017380	0.43	+0.1
3,806,722	+		TX73_017380	0.50	-1.8
3,806,722	+		TX73_017380	0.50	+0.9
3,806,722	+		TX73_017380	0.50	+1.2
3,806,722	+		TX73_017380	0.50	+0.1
3,806,730	-		TX73_017380	0.51	-0.8
3,806,730	-		TX73_017380	0.51	-0.7
3,806,741	+		TX73_017380	0.54	+0.3
3,806,749	-		TX73_017380	0.55	+1.0
3,806,773	+		TX73_017380	0.60	+1.2
3,806,778	-		TX73_017380	0.62	+0.2
3,806,791	-		TX73_017380	0.64	+1.0
3,806,791	-		TX73_017380	0.64	+1.5
3,806,854	+		TX73_017380	0.78	-1.6
3,806,864	+		TX73_017380	0.80	+0.4
3,806,883	+		TX73_017380	0.84	-0.5
3,806,893	+		TX73_017380	0.86	-0.5
3,806,907	+		TX73_017380	0.89	+0.5
3,806,927	+				+0.1
3,806,936	-				-1.3
3,806,955	+				+0.3
3,806,965	+				+0.7
3,806,981	-				+0.5
3,806,983	-				+1.8
3,806,988	-				+1.1
3,806,990	-				-0.7
3,806,992	+				+0.2
3,806,998	-				-0.4
3,807,003	+				-0.6
3,807,028	+				+0.6
3,807,035	-				+0.1
3,807,043	+				+0.5
3,807,106	+				+1.5
3,807,281	-				-0.1
3,807,315	+				-1.3
3,807,340	+				-0.3
3,807,347	-				-1.7
3,807,376	-				+0.9
3,807,378	+				+0.7
3,807,378	+				-0.6
3,807,378	+				+0.8
3,807,378	+				+0.7
3,807,378	+				+0.6
3,807,378	+				-2.2
3,807,378	+				-1.3
3,807,378	+				+0.5
3,807,378	+				-0.2
3,807,378	+				-0.5
3,807,378	+				-0.8
3,807,386	-				-1.6
3,807,386	-				-1.6
3,807,386	-				+0.3
3,807,386	-				-2.8
3,807,386	-				+0.2
3,807,386	-				-0.3
3,807,386	-				+1.3
3,807,386	-				+0.6
3,807,388	+				-0.4
3,807,399	+				-1.3
3,807,401	+				-0.8
3,807,411	+				+1.0
3,807,411	+				+0.6
3,807,417	-				-0.3
3,807,417	-				-1.9
3,807,476	+				-0.5
3,807,492	+		TX73_017390	0.10	-1.1
3,807,492	+		TX73_017390	0.10	-2.1
3,807,494	-		TX73_017390	0.11	-1.9
3,807,537	-		TX73_017390	0.16	+0.3
3,807,541	-		TX73_017390	0.16	+1.6
3,807,543	+		TX73_017390	0.16	+0.6
3,807,604	-		TX73_017390	0.24	-1.3
3,807,665	-		TX73_017390	0.31	+0.2
3,807,690	+		TX73_017390	0.34	+0.8
3,807,709	-		TX73_017390	0.36	-0.3
3,807,712	-		TX73_017390	0.37	+1.9
3,807,717	-		TX73_017390	0.37	+0.4
3,807,717	-		TX73_017390	0.37	+0.2
3,807,721	-		TX73_017390	0.38	-2.1
3,807,724	+		TX73_017390	0.38	-2.1
3,807,726	-		TX73_017390	0.39	+0.2
3,807,726	-		TX73_017390	0.39	-1.6
3,807,742	-		TX73_017390	0.40	+0.5
3,807,756	+		TX73_017390	0.42	-0.7
3,807,758	-		TX73_017390	0.42	+0.2
3,807,774	-		TX73_017390	0.44	-1.4
3,807,774	-		TX73_017390	0.44	+0.9
3,807,796	-		TX73_017390	0.47	-0.2
3,807,812	+		TX73_017390	0.49	-0.6
3,807,813	-		TX73_017390	0.49	-0.8
3,807,821	+		TX73_017390	0.50	-1.7
3,807,821	+		TX73_017390	0.50	+0.0
3,807,821	+		TX73_017390	0.50	+0.7
3,807,829	-		TX73_017390	0.51	+2.4
3,807,829	-		TX73_017390	0.51	-0.4
3,807,831	+		TX73_017390	0.51	+0.0
3,807,867	-		TX73_017390	0.56	+0.3
3,807,869	+		TX73_017390	0.56	+0.7
3,807,874	+		TX73_017390	0.56	-0.1
3,807,877	-		TX73_017390	0.57	-0.1
3,807,879	+		TX73_017390	0.57	+1.0
3,807,879	+		TX73_017390	0.57	+1.9
3,807,879	+		TX73_017390	0.57	+0.1
3,807,879	+		TX73_017390	0.57	-0.4
3,807,879	+		TX73_017390	0.57	+1.8
3,807,879	+		TX73_017390	0.57	+0.6
3,807,887	-		TX73_017390	0.58	+0.6
3,807,887	-		TX73_017390	0.58	-0.5
3,807,887	-		TX73_017390	0.58	+0.4
3,807,887	-		TX73_017390	0.58	+1.2
3,807,887	-		TX73_017390	0.58	-1.9
3,807,887	-		TX73_017390	0.58	-1.5
3,807,921	+		TX73_017390	0.62	+0.2
3,807,929	-		TX73_017390	0.63	-1.9
3,807,929	-		TX73_017390	0.63	+2.6
3,807,943	-		TX73_017390	0.65	+1.1