Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_020550

Experiment: NFM with succinate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM with succinate
4,484,408	-		TX73_020545	0.34	+0.2
4,484,415	+		TX73_020545	0.34	+0.2
4,484,440	-		TX73_020545	0.36	+0.1
4,484,482	-		TX73_020545	0.39	-0.2
4,484,485	-		TX73_020545	0.39	-0.5
4,484,486	+		TX73_020545	0.39	-1.0
4,484,494	-		TX73_020545	0.40	+0.5
4,484,541	-		TX73_020545	0.43	+1.0
4,484,548	-		TX73_020545	0.43	-0.3
4,484,550	+		TX73_020545	0.44	+0.2
4,484,561	+		TX73_020545	0.44	-0.2
4,484,574	-		TX73_020545	0.45	+0.1
4,484,611	-		TX73_020545	0.48	+0.4
4,484,655	-		TX73_020545	0.51	-0.7
4,484,661	+		TX73_020545	0.51	-0.4
4,484,661	+		TX73_020545	0.51	+0.4
4,484,668	-		TX73_020545	0.52	-0.1
4,484,687	+		TX73_020545	0.53	+0.3
4,484,687	+		TX73_020545	0.53	-0.8
4,484,687	+		TX73_020545	0.53	-0.1
4,484,687	+		TX73_020545	0.53	-0.3
4,484,695	-		TX73_020545	0.54	+0.5
4,484,695	-		TX73_020545	0.54	-0.2
4,484,695	-		TX73_020545	0.54	-0.9
4,484,695	-		TX73_020545	0.54	+0.5
4,484,792	-		TX73_020545	0.60	+0.3
4,484,799	+		TX73_020545	0.61	-0.4
4,484,799	+		TX73_020545	0.61	-0.3
4,484,807	+		TX73_020545	0.61	+0.9
4,484,807	+		TX73_020545	0.61	-0.5
4,484,807	+		TX73_020545	0.61	+0.0
4,484,807	+		TX73_020545	0.61	+0.0
4,484,823	-		TX73_020545	0.62	+0.4
4,484,823	-		TX73_020545	0.62	-0.2
4,484,823	-		TX73_020545	0.62	-0.9
4,484,830	+		TX73_020545	0.63	+0.8
4,484,864	-		TX73_020545	0.65	-0.0
4,484,874	+		TX73_020545	0.66	-0.1
4,484,898	+		TX73_020545	0.67	-0.7
4,484,930	+		TX73_020545	0.70	+0.2
4,484,932	-		TX73_020545	0.70	-0.4
4,484,942	+		TX73_020545	0.71	+0.6
4,484,944	+		TX73_020545	0.71	-0.5
4,484,997	+		TX73_020545	0.74	+0.5
4,484,997	+		TX73_020545	0.74	+0.5
4,485,022	+		TX73_020545	0.76	-0.0
4,485,073	-		TX73_020545	0.79	-0.2
4,485,083	+		TX73_020545	0.80	-0.1
4,485,088	+		TX73_020545	0.81	-1.1
4,485,103	-		TX73_020545	0.82	-0.5
4,485,185	-		TX73_020545	0.87	-0.3
4,485,219	+		TX73_020545	0.90	-0.7
4,485,259	+				-0.8
4,485,267	-				+0.5
4,485,334	+				+0.4
4,485,416	+				-0.9
4,485,424	+				-0.0
4,485,424	+				+0.2
4,485,424	-				-0.2
4,485,432	-				-0.5
4,485,454	-				-0.6
4,485,473	-				-0.2
4,485,478	+				-0.4
4,485,524	-		TX73_020550	0.12	-0.9
4,485,532	+		TX73_020550	0.13	-0.3
4,485,534	-		TX73_020550	0.13	+0.1
4,485,538	+		TX73_020550	0.14	-0.4
4,485,546	-		TX73_020550	0.15	-0.4
4,485,570	+		TX73_020550	0.17	-0.4
4,485,600	+		TX73_020550	0.20	+0.3
4,485,621	-		TX73_020550	0.22	-0.4
4,485,646	+		TX73_020550	0.25	+0.3
4,485,679	-		TX73_020550	0.28	+0.1
4,485,699	-		TX73_020550	0.30	+0.1
4,485,741	-		TX73_020550	0.34	+0.5
4,485,767	+		TX73_020550	0.37	+0.4
4,485,809	-		TX73_020550	0.41	-0.2
4,485,829	-		TX73_020550	0.43	-1.6
4,485,863	-		TX73_020550	0.46	-0.8
4,485,863	-		TX73_020550	0.46	-0.2
4,485,865	+		TX73_020550	0.47	+0.4
4,485,865	-		TX73_020550	0.47	+1.2
4,485,872	+		TX73_020550	0.47	-0.5
4,485,902	-		TX73_020550	0.50	-0.4
4,485,902	-		TX73_020550	0.50	-0.3
4,485,902	-		TX73_020550	0.50	-0.2
4,485,904	+		TX73_020550	0.51	+0.1
4,485,916	+		TX73_020550	0.52	+0.0
4,485,938	+		TX73_020550	0.54	-0.2
4,485,999	-		TX73_020550	0.60	-0.2
4,486,010	-		TX73_020550	0.61	-0.6
4,486,020	-		TX73_020550	0.62	+0.2
4,486,038	-		TX73_020550	0.64	-0.3
4,486,048	-		TX73_020550	0.65	+0.0
4,486,057	-		TX73_020550	0.66	-0.2
4,486,087	+		TX73_020550	0.69	-0.6
4,486,097	+		TX73_020550	0.70	+0.4
4,486,103	-		TX73_020550	0.70	-0.3
4,486,124	-		TX73_020550	0.73	-0.0
4,486,156	+		TX73_020550	0.76	-0.4
4,486,174	-		TX73_020550	0.78	+0.1
4,486,174	-		TX73_020550	0.78	-0.3
4,486,268	+		TX73_020550	0.87	+0.7
4,486,312	-				+0.0
4,486,328	+				+0.6
4,486,372	-				-0.6
4,486,382	+				+0.2
4,486,444	+				-1.0
4,486,445	-				-0.4
4,486,466	+				+0.4
4,486,474	-				-0.1
4,486,474	-				-0.7
4,486,495	+				-0.7
4,486,527	+				+0.2
4,486,532	-				-0.3
4,486,547	+				+0.2
4,486,557	-		TX73_020555	0.11	+0.1
4,486,557	-		TX73_020555	0.11	+0.1
4,486,557	-		TX73_020555	0.11	-0.2
4,486,610	-		TX73_020555	0.16	-0.4
4,486,611	-		TX73_020555	0.16	+0.5
4,486,628	-		TX73_020555	0.17	+0.3
4,486,633	-		TX73_020555	0.18	-0.5
4,486,725	-		TX73_020555	0.26	+0.5
4,486,727	+		TX73_020555	0.27	+0.1
4,486,727	+		TX73_020555	0.27	-0.2
4,486,727	+		TX73_020555	0.27	-1.1
4,486,733	+		TX73_020555	0.27	+0.0
4,486,735	+		TX73_020555	0.27	-0.8
4,486,735	-		TX73_020555	0.27	-1.1
4,486,741	-		TX73_020555	0.28	-0.7
4,486,742	+		TX73_020555	0.28	+0.0
4,486,769	-		TX73_020555	0.31	+0.3
4,486,780	+		TX73_020555	0.32	-0.2
4,486,788	-		TX73_020555	0.32	-0.9
4,486,788	-		TX73_020555	0.32	+0.2
4,486,794	-		TX73_020555	0.33	-0.2
4,486,816	-		TX73_020555	0.35	+0.6
4,486,821	-		TX73_020555	0.36	-0.5
4,486,845	+		TX73_020555	0.38	+0.4
4,486,853	-		TX73_020555	0.39	-0.5
4,486,876	+		TX73_020555	0.41	-0.1
4,486,906	-		TX73_020555	0.44	+0.3
4,486,908	+		TX73_020555	0.44	-0.6
4,486,926	+		TX73_020555	0.45	+0.1
4,486,931	-		TX73_020555	0.46	-0.0
4,486,951	+		TX73_020555	0.48	-0.3
4,487,020	-		TX73_020555	0.54	+0.4
4,487,031	+		TX73_020555	0.55	-0.3
4,487,031	+		TX73_020555	0.55	-0.3
4,487,039	-		TX73_020555	0.56	-0.2
4,487,039	-		TX73_020555	0.56	-0.1
4,487,163	+		TX73_020555	0.68	-0.6
4,487,175	-		TX73_020555	0.69	+0.1
4,487,213	+		TX73_020555	0.73	-0.0
4,487,222	+		TX73_020555	0.73	+0.5
4,487,250	+		TX73_020555	0.76	-0.2
4,487,258	-		TX73_020555	0.77	-0.2
4,487,293	+		TX73_020555	0.80	+0.8
4,487,311	+		TX73_020555	0.82	+1.0
4,487,323	-		TX73_020555	0.83	-0.8
4,487,345	-		TX73_020555	0.85	-0.3
4,487,363	+		TX73_020555	0.87	-0.2
4,487,384	-		TX73_020555	0.89	-0.2