Experiment: NFM_No_Mo with acetate trihydrate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_024000 and TX73_024005 are separated by 15 nucleotides TX73_024005 and TX73_024010 are separated by 2 nucleotides TX73_024010 and TX73_024015 are separated by 37 nucleotides TX73_024015 and TX73_024020 overlap by 1 nucleotides TX73_024020 and TX73_024025 overlap by 4 nucleotides
TX73_024000: TX73_024000 - SIR2 family protein, at 5,206,324 to 5,207,226
_024000
TX73_024005: TX73_024005 - hypothetical protein, at 5,207,242 to 5,207,520
_024005
TX73_024010: TX73_024010 - putative nitrogen fixation protein NifT, at 5,207,523 to 5,207,723
_024010
TX73_024015: TX73_024015 - nitrogen fixation protein NifZ, at 5,207,761 to 5,207,994
_024015
TX73_024020: TX73_024020 - nitrogen fixation protein NifZ, at 5,207,994 to 5,208,293
_024020
TX73_024025: TX73_024025 - 4Fe4S-binding leucine-rich repeat protein, at 5,208,290 to 5,209,075
_024025
Position (kb) 5207
5208 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5206.268 kb on + strand at 5206.278 kb on + strand at 5206.281 kb on - strand at 5206.294 kb on + strand at 5206.423 kb on + strand, within TX73_024000 at 5206.436 kb on - strand, within TX73_024000 at 5206.534 kb on + strand, within TX73_024000 at 5206.639 kb on - strand, within TX73_024000 at 5206.693 kb on + strand, within TX73_024000 at 5206.721 kb on + strand, within TX73_024000 at 5206.796 kb on + strand, within TX73_024000 at 5206.855 kb on + strand, within TX73_024000 at 5206.863 kb on - strand, within TX73_024000 at 5206.971 kb on - strand, within TX73_024000 at 5207.003 kb on + strand, within TX73_024000 at 5207.003 kb on + strand, within TX73_024000 at 5207.048 kb on + strand, within TX73_024000 at 5207.052 kb on - strand, within TX73_024000 at 5207.070 kb on + strand, within TX73_024000 at 5207.088 kb on - strand, within TX73_024000 at 5207.132 kb on + strand, within TX73_024000 at 5207.172 kb on + strand at 5207.185 kb on + strand at 5207.185 kb on + strand at 5207.185 kb on + strand at 5207.185 kb on + strand at 5207.185 kb on + strand at 5207.214 kb on - strand at 5207.228 kb on + strand at 5207.236 kb on + strand at 5207.263 kb on + strand at 5207.275 kb on + strand, within TX73_024005 at 5207.275 kb on + strand, within TX73_024005 at 5207.282 kb on - strand, within TX73_024005 at 5207.283 kb on - strand, within TX73_024005 at 5207.295 kb on - strand, within TX73_024005 at 5207.298 kb on + strand, within TX73_024005 at 5207.317 kb on + strand, within TX73_024005 at 5207.322 kb on + strand, within TX73_024005 at 5207.322 kb on + strand, within TX73_024005 at 5207.371 kb on + strand, within TX73_024005 at 5207.387 kb on - strand, within TX73_024005 at 5207.389 kb on - strand, within TX73_024005 at 5207.396 kb on - strand, within TX73_024005 at 5207.408 kb on + strand, within TX73_024005 at 5207.419 kb on + strand, within TX73_024005 at 5207.441 kb on - strand, within TX73_024005 at 5207.449 kb on - strand, within TX73_024005 at 5207.451 kb on - strand, within TX73_024005 at 5207.471 kb on + strand, within TX73_024005 at 5207.471 kb on + strand, within TX73_024005 at 5207.479 kb on - strand, within TX73_024005 at 5207.521 kb on + strand at 5207.529 kb on - strand at 5207.537 kb on + strand at 5207.545 kb on - strand, within TX73_024010 at 5207.604 kb on - strand, within TX73_024010 at 5207.640 kb on - strand, within TX73_024010 at 5207.657 kb on + strand, within TX73_024010 at 5207.665 kb on - strand, within TX73_024010 at 5207.665 kb on - strand, within TX73_024010 at 5207.676 kb on + strand, within TX73_024010 at 5207.684 kb on - strand, within TX73_024010 at 5207.721 kb on + strand at 5207.732 kb on + strand at 5207.740 kb on - strand at 5207.759 kb on + strand at 5207.759 kb on + strand at 5207.817 kb on + strand, within TX73_024015 at 5207.848 kb on - strand, within TX73_024015 at 5207.858 kb on + strand, within TX73_024015 at 5207.903 kb on + strand, within TX73_024015 at 5207.929 kb on - strand, within TX73_024015 at 5207.967 kb on - strand, within TX73_024015 at 5208.010 kb on + strand at 5208.018 kb on - strand at 5208.026 kb on - strand, within TX73_024020 at 5208.069 kb on + strand, within TX73_024020 at 5208.072 kb on - strand, within TX73_024020 at 5208.159 kb on - strand, within TX73_024020 at 5208.165 kb on - strand, within TX73_024020 at 5208.230 kb on - strand, within TX73_024020 at 5208.232 kb on - strand, within TX73_024020 at 5208.233 kb on - strand, within TX73_024020 at 5208.291 kb on - strand at 5208.296 kb on - strand at 5208.320 kb on - strand at 5208.330 kb on - strand at 5208.335 kb on - strand at 5208.336 kb on - strand at 5208.357 kb on + strand at 5208.427 kb on - strand, within TX73_024025 at 5208.506 kb on - strand, within TX73_024025 at 5208.516 kb on - strand, within TX73_024025 at 5208.519 kb on + strand, within TX73_024025
Per-strain Table
Position Strand Gene LocusTag Fraction NFM_No_Mo with acetate trihydrate remove 5,206,268 + -0.5 5,206,278 + -0.2 5,206,281 - -0.5 5,206,294 + +0.3 5,206,423 + TX73_024000 0.11 -1.6 5,206,436 - TX73_024000 0.12 -0.7 5,206,534 + TX73_024000 0.23 +1.2 5,206,639 - TX73_024000 0.35 -0.2 5,206,693 + TX73_024000 0.41 -0.8 5,206,721 + TX73_024000 0.44 -0.3 5,206,796 + TX73_024000 0.52 -0.8 5,206,855 + TX73_024000 0.59 -0.4 5,206,863 - TX73_024000 0.60 -0.1 5,206,971 - TX73_024000 0.72 -1.6 5,207,003 + TX73_024000 0.75 -0.6 5,207,003 + TX73_024000 0.75 +0.1 5,207,048 + TX73_024000 0.80 -1.7 5,207,052 - TX73_024000 0.81 -1.0 5,207,070 + TX73_024000 0.83 -0.1 5,207,088 - TX73_024000 0.85 +0.5 5,207,132 + TX73_024000 0.89 +0.2 5,207,172 + -0.1 5,207,185 + -1.0 5,207,185 + +0.4 5,207,185 + -0.0 5,207,185 + -0.4 5,207,185 + -0.6 5,207,214 - +0.6 5,207,228 + +0.4 5,207,236 + -1.6 5,207,263 + -1.0 5,207,275 + TX73_024005 0.12 +1.4 5,207,275 + TX73_024005 0.12 +0.4 5,207,282 - TX73_024005 0.14 -0.1 5,207,283 - TX73_024005 0.15 +0.3 5,207,295 - TX73_024005 0.19 +0.8 5,207,298 + TX73_024005 0.20 +0.8 5,207,317 + TX73_024005 0.27 +0.8 5,207,322 + TX73_024005 0.29 +0.0 5,207,322 + TX73_024005 0.29 -1.6 5,207,371 + TX73_024005 0.46 +0.1 5,207,387 - TX73_024005 0.52 -0.5 5,207,389 - TX73_024005 0.53 +1.2 5,207,396 - TX73_024005 0.55 -2.2 5,207,408 + TX73_024005 0.59 +0.2 5,207,419 + TX73_024005 0.63 +0.7 5,207,441 - TX73_024005 0.71 +0.7 5,207,449 - TX73_024005 0.74 +0.8 5,207,451 - TX73_024005 0.75 -0.0 5,207,471 + TX73_024005 0.82 -0.4 5,207,471 + TX73_024005 0.82 -0.3 5,207,479 - TX73_024005 0.85 -0.4 5,207,521 + -0.1 5,207,529 - -1.2 5,207,537 + -0.4 5,207,545 - TX73_024010 0.11 -1.2 5,207,604 - TX73_024010 0.40 +1.5 5,207,640 - TX73_024010 0.58 -0.4 5,207,657 + TX73_024010 0.67 -0.3 5,207,665 - TX73_024010 0.71 -0.7 5,207,665 - TX73_024010 0.71 +0.1 5,207,676 + TX73_024010 0.76 +0.1 5,207,684 - TX73_024010 0.80 -0.1 5,207,721 + +0.7 5,207,732 + +0.2 5,207,740 - -2.3 5,207,759 + -0.4 5,207,759 + +1.7 5,207,817 + TX73_024015 0.24 -1.3 5,207,848 - TX73_024015 0.37 -0.1 5,207,858 + TX73_024015 0.41 -0.4 5,207,903 + TX73_024015 0.61 +0.7 5,207,929 - TX73_024015 0.72 -1.5 5,207,967 - TX73_024015 0.88 -0.9 5,208,010 + -0.5 5,208,018 - -0.2 5,208,026 - TX73_024020 0.11 +0.5 5,208,069 + TX73_024020 0.25 -0.8 5,208,072 - TX73_024020 0.26 +1.9 5,208,159 - TX73_024020 0.55 +0.5 5,208,165 - TX73_024020 0.57 +0.3 5,208,230 - TX73_024020 0.79 +0.6 5,208,232 - TX73_024020 0.79 -0.6 5,208,233 - TX73_024020 0.80 -0.8 5,208,291 - +1.1 5,208,296 - +0.5 5,208,320 - +0.6 5,208,330 - +0.5 5,208,335 - +0.9 5,208,336 - -0.1 5,208,357 + -0.0 5,208,427 - TX73_024025 0.17 +0.8 5,208,506 - TX73_024025 0.27 +0.3 5,208,516 - TX73_024025 0.29 -0.9 5,208,519 + TX73_024025 0.29 -1.5
Or see this region's nucleotide sequence