Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017460

Experiment: NFM_No_Mo with acetate trihydrate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM_No_Mo with acetate trihydrate
3,815,250	-				+0.1
3,815,252	+				-0.0
3,815,273	+				-0.1
3,815,294	+				-0.6
3,815,304	+				+0.0
3,815,304	+				+0.7
3,815,312	-				+0.4
3,815,312	-				+0.2
3,815,653	+				-0.1
3,815,653	+				+0.4
3,815,656	+				+0.0
3,815,661	-				+0.4
3,815,661	-				+1.0
3,815,661	-				-1.3
3,815,674	+				-0.3
3,815,682	-				-1.6
3,815,682	-				-0.0
3,815,682	-				+0.4
3,815,709	-				+0.1
3,815,720	-				+0.4
3,815,731	+				-0.7
3,815,739	-				+0.2
3,815,756	-				-0.2
3,815,780	+				+0.1
3,815,793	-				+0.2
3,815,798	-				-0.1
3,815,801	-				+0.2
3,815,807	+				+0.2
3,815,812	+				-0.1
3,815,817	-				-0.5
3,815,826	+				+0.4
3,815,858	+				+0.1
3,815,866	-				+0.7
3,815,866	-				+0.2
3,815,868	+				+0.9
3,815,868	+				-1.0
3,815,876	-				-0.2
3,815,892	-				+0.8
3,815,913	+				+0.0
3,815,958	+				+0.6
3,815,963	+				+0.2
3,815,982	+				-0.9
3,815,989	-				+0.5
3,816,026	+				-0.4
3,816,157	-		TX73_017460	0.13	+0.3
3,816,169	-		TX73_017460	0.13	+0.1
3,816,196	-		TX73_017460	0.14	-0.5
3,816,225	+		TX73_017460	0.15	+2.1
3,816,232	+		TX73_017460	0.15	-0.8
3,816,233	-		TX73_017460	0.15	+0.6
3,816,235	-		TX73_017460	0.15	+0.7
3,816,235	-		TX73_017460	0.15	+0.3
3,816,239	+		TX73_017460	0.15	-0.6
3,816,242	-		TX73_017460	0.15	+0.2
3,816,257	-		TX73_017460	0.16	-0.3
3,816,280	-		TX73_017460	0.16	-0.8
3,816,296	+		TX73_017460	0.17	-0.6
3,816,302	+		TX73_017460	0.17	-1.8
3,816,304	-		TX73_017460	0.17	+0.2
3,816,304	-		TX73_017460	0.17	+0.0
3,816,340	+		TX73_017460	0.18	+0.1
3,816,342	+		TX73_017460	0.18	-0.2
3,816,347	+		TX73_017460	0.18	+0.8
3,816,355	-		TX73_017460	0.19	+0.1
3,816,360	-		TX73_017460	0.19	+0.7
3,816,377	+		TX73_017460	0.19	+0.1
3,816,377	+		TX73_017460	0.19	+0.4
3,816,377	-		TX73_017460	0.19	-0.0
3,816,385	-		TX73_017460	0.19	+0.8
3,816,385	-		TX73_017460	0.19	-1.6
3,816,385	-		TX73_017460	0.19	+0.3
3,816,385	-		TX73_017460	0.19	-0.3
3,816,385	-		TX73_017460	0.19	-0.3
3,816,385	-		TX73_017460	0.19	-0.7
3,816,393	-		TX73_017460	0.20	-0.2
3,816,398	+		TX73_017460	0.20	+0.6
3,816,400	-		TX73_017460	0.20	+0.1
3,816,410	+		TX73_017460	0.20	-0.4
3,816,425	+		TX73_017460	0.21	-1.5
3,816,433	-		TX73_017460	0.21	-0.1
3,816,437	+		TX73_017460	0.21	+0.2
3,816,441	-		TX73_017460	0.21	-0.2
3,816,442	-		TX73_017460	0.21	-0.1
3,816,480	-		TX73_017460	0.22	-0.3
3,816,480	-		TX73_017460	0.22	-0.8
3,816,480	-		TX73_017460	0.22	+0.5
3,816,493	+		TX73_017460	0.23	-0.2
3,816,493	+		TX73_017460	0.23	-0.5
3,816,501	-		TX73_017460	0.23	+0.9
3,816,503	-		TX73_017460	0.23	+0.0
3,816,512	+		TX73_017460	0.23	+0.7
3,816,517	-		TX73_017460	0.23	-0.3
3,816,519	+		TX73_017460	0.23	+0.7
3,816,519	+		TX73_017460	0.23	-1.6
3,816,557	+		TX73_017460	0.25	+0.3
3,816,567	-		TX73_017460	0.25	+0.2
3,816,632	+		TX73_017460	0.27	+0.7
3,816,635	-		TX73_017460	0.27	-1.8
3,816,646	-		TX73_017460	0.27	-0.3
3,816,656	-		TX73_017460	0.28	-0.3
3,816,658	+		TX73_017460	0.28	-0.1
3,816,658	+		TX73_017460	0.28	-0.9
3,816,665	-		TX73_017460	0.28	+0.9
3,816,666	-		TX73_017460	0.28	-0.3
3,816,666	-		TX73_017460	0.28	+0.2
3,816,670	-		TX73_017460	0.28	-1.3
3,816,704	-		TX73_017460	0.29	+0.4
3,816,706	-		TX73_017460	0.29	-0.2
3,816,706	-		TX73_017460	0.29	-0.4
3,816,716	-		TX73_017460	0.29	+0.3
3,816,718	+		TX73_017460	0.30	-0.5
3,816,723	+		TX73_017460	0.30	+0.0
3,816,726	-		TX73_017460	0.30	-0.0
3,816,736	-		TX73_017460	0.30	-0.1
3,816,741	-		TX73_017460	0.30	-0.0
3,816,758	+		TX73_017460	0.31	-0.5
3,816,765	+		TX73_017460	0.31	-0.3
3,816,765	+		TX73_017460	0.31	-0.6
3,816,766	-		TX73_017460	0.31	+0.1
3,816,766	-		TX73_017460	0.31	+0.1
3,816,799	-		TX73_017460	0.32	+0.6
3,816,815	-		TX73_017460	0.32	+0.5
3,816,818	+		TX73_017460	0.33	+0.5
3,816,860	-		TX73_017460	0.34	+0.9
3,816,878	+		TX73_017460	0.34	+0.6
3,816,891	-		TX73_017460	0.35	-0.4
3,816,907	+		TX73_017460	0.35	+0.1
3,816,909	-		TX73_017460	0.35	-0.3
3,816,924	+		TX73_017460	0.36	-2.5
3,816,924	+		TX73_017460	0.36	+1.4
3,816,924	+		TX73_017460	0.36	+0.0
3,816,932	-		TX73_017460	0.36	-0.1
3,816,956	+		TX73_017460	0.37	-0.2
3,816,966	+		TX73_017460	0.37	-0.2
3,816,979	+		TX73_017460	0.37	-0.2
3,816,994	+		TX73_017460	0.38	+0.9
3,816,999	-		TX73_017460	0.38	-0.7
3,817,002	-		TX73_017460	0.38	-0.3
3,817,002	-		TX73_017460	0.38	-0.5
3,817,002	-		TX73_017460	0.38	-0.0
3,817,002	-		TX73_017460	0.38	-0.5
3,817,002	-		TX73_017460	0.38	-0.5
3,817,027	+		TX73_017460	0.39	+1.4
3,817,028	+		TX73_017460	0.39	+0.2
3,817,033	+		TX73_017460	0.39	+2.7
3,817,033	+		TX73_017460	0.39	-1.5
3,817,033	+		TX73_017460	0.39	+0.1
3,817,057	+		TX73_017460	0.40	-0.1
3,817,057	+		TX73_017460	0.40	+0.5
3,817,064	-		TX73_017460	0.40	-0.1
3,817,065	-		TX73_017460	0.40	-1.0
3,817,072	-		TX73_017460	0.40	-0.1
3,817,087	+		TX73_017460	0.41	+0.2
3,817,087	+		TX73_017460	0.41	-0.1
3,817,125	-		TX73_017460	0.42	-1.2
3,817,136	+		TX73_017460	0.42	+0.0
3,817,136	+		TX73_017460	0.42	+0.6
3,817,150	-		TX73_017460	0.43	-1.4
3,817,154	+		TX73_017460	0.43	+0.1
3,817,160	-		TX73_017460	0.43	-0.6
3,817,163	+		TX73_017460	0.43	-0.1
3,817,165	+		TX73_017460	0.43	+0.3
3,817,166	-		TX73_017460	0.43	+1.1
3,817,166	-		TX73_017460	0.43	+0.4
3,817,174	+		TX73_017460	0.43	-0.1
3,817,182	-		TX73_017460	0.44	-0.7
3,817,184	-		TX73_017460	0.44	+0.2
3,817,214	-		TX73_017460	0.45	-0.2
3,817,220	-		TX73_017460	0.45	+0.4
3,817,234	+		TX73_017460	0.45	+0.2
3,817,234	+		TX73_017460	0.45	+0.9
3,817,234	+		TX73_017460	0.45	-1.1
3,817,241	+		TX73_017460	0.45	+0.5
3,817,242	-		TX73_017460	0.45	+0.7
3,817,248	+		TX73_017460	0.46	+0.1
3,817,249	-		TX73_017460	0.46	+0.3
3,817,249	-		TX73_017460	0.46	-1.2
3,817,258	+		TX73_017460	0.46	-1.6
3,817,258	+		TX73_017460	0.46	+0.2
3,817,258	+		TX73_017460	0.46	-0.6
3,817,300	+		TX73_017460	0.47	+0.9
3,817,308	-		TX73_017460	0.47	-0.2
3,817,327	-		TX73_017460	0.48	-0.8
3,817,330	+		TX73_017460	0.48	+0.2
3,817,334	+		TX73_017460	0.48	-0.2
3,817,336	-		TX73_017460	0.48	+0.4
3,817,342	-		TX73_017460	0.48	-0.0
3,817,342	-		TX73_017460	0.48	+0.9
3,817,342	-		TX73_017460	0.48	+0.7
3,817,342	-		TX73_017460	0.48	-0.2
3,817,347	-		TX73_017460	0.49	-0.1
3,817,347	-		TX73_017460	0.49	+0.1
3,817,347	-		TX73_017460	0.49	+0.2
3,817,347	-		TX73_017460	0.49	-0.1
3,817,347	-		TX73_017460	0.49	-0.1
3,817,348	-		TX73_017460	0.49	+0.2
3,817,362	+		TX73_017460	0.49	+0.5
3,817,362	+		TX73_017460	0.49	+0.7
3,817,362	-		TX73_017460	0.49	+0.7
3,817,384	+		TX73_017460	0.50	-0.0
3,817,384	+		TX73_017460	0.50	+0.6
3,817,388	+		TX73_017460	0.50	+0.4
3,817,392	+		TX73_017460	0.50	+0.8
3,817,392	-		TX73_017460	0.50	-1.7
3,817,392	-		TX73_017460	0.50	-0.0
3,817,400	-		TX73_017460	0.50	-0.3
3,817,400	-		TX73_017460	0.50	-0.0
3,817,440	+		TX73_017460	0.51	+0.7
3,817,440	-		TX73_017460	0.51	-0.4
3,817,462	+		TX73_017460	0.52	+0.9
3,817,474	-		TX73_017460	0.52	-0.1
3,817,476	+		TX73_017460	0.52	-0.1
3,817,476	+		TX73_017460	0.52	+0.7
3,817,476	+		TX73_017460	0.52	+0.8
3,817,476	+		TX73_017460	0.52	-0.8
3,817,476	+		TX73_017460	0.52	+0.9
3,817,484	-		TX73_017460	0.53	+0.8
3,817,485	+		TX73_017460	0.53	-0.7
3,817,488	+		TX73_017460	0.53	+0.5
3,817,489	+		TX73_017460	0.53	+0.8
3,817,494	-		TX73_017460	0.53	-0.5
3,817,494	-		TX73_017460	0.53	-0.2
3,817,503	+		TX73_017460	0.53	-0.5
3,817,506	-		TX73_017460	0.53	+0.3
3,817,520	+		TX73_017460	0.54	+0.3
3,817,525	+		TX73_017460	0.54	-0.2
3,817,592	-		TX73_017460	0.56	-0.4
3,817,606	+		TX73_017460	0.56	-2.6
3,817,607	+		TX73_017460	0.56	+0.3
3,817,607	+		TX73_017460	0.56	-0.4
3,817,607	+		TX73_017460	0.56	+0.5
3,817,615	-		TX73_017460	0.57	+0.4
3,817,615	-		TX73_017460	0.57	-0.2
3,817,694	+		TX73_017460	0.59	+0.6
3,817,694	+		TX73_017460	0.59	-0.4
3,817,710	+		TX73_017460	0.60	+1.4
3,817,730	+		TX73_017460	0.60	-0.7
3,817,730	+		TX73_017460	0.60	-0.7
3,817,738	-		TX73_017460	0.60	+0.7
3,817,756	-		TX73_017460	0.61	-0.7
3,817,768	+		TX73_017460	0.61	-0.4
3,817,772	+		TX73_017460	0.61	-0.1
3,817,780	-		TX73_017460	0.62	+0.2
3,817,780	-		TX73_017460	0.62	+0.3
3,817,785	-		TX73_017460	0.62	+0.3
3,817,817	-		TX73_017460	0.63	-0.4
3,817,845	-		TX73_017460	0.64	+0.4
3,817,861	+		TX73_017460	0.64	-0.4
3,817,867	-		TX73_017460	0.64	-0.2
3,817,876	+		TX73_017460	0.65	-1.5
3,817,876	+		TX73_017460	0.65	+0.4
3,817,876	+		TX73_017460	0.65	+0.4
3,817,878	-		TX73_017460	0.65	+0.6
3,817,880	-		TX73_017460	0.65	+0.4
3,817,884	-		TX73_017460	0.65	+0.2
3,817,884	-		TX73_017460	0.65	-0.7
3,817,912	-		TX73_017460	0.66	-0.2
3,817,920	-		TX73_017460	0.66	+0.6
3,817,964	-		TX73_017460	0.67	+0.3
3,817,982	+		TX73_017460	0.68	-0.8
3,817,982	+		TX73_017460	0.68	-0.6
3,817,983	-		TX73_017460	0.68	+0.3
3,817,990	-		TX73_017460	0.68	-1.7
3,817,990	-		TX73_017460	0.68	-0.1
3,818,000	-		TX73_017460	0.68	-0.0
3,818,018	+		TX73_017460	0.69	+0.4
3,818,039	+		TX73_017460	0.70	-0.1
3,818,046	+		TX73_017460	0.70	+0.4
3,818,056	+		TX73_017460	0.70	-0.2
3,818,066	+		TX73_017460	0.70	+0.2
3,818,086	+		TX73_017460	0.71	-2.0
3,818,088	+		TX73_017460	0.71	+0.6
3,818,094	-		TX73_017460	0.71	+0.3
3,818,094	-		TX73_017460	0.71	+0.9
3,818,140	-		TX73_017460	0.73	-0.2
3,818,143	+		TX73_017460	0.73	-0.5
3,818,165	+		TX73_017460	0.73	-0.4
3,818,174	-		TX73_017460	0.74	-0.3
3,818,178	+		TX73_017460	0.74	-1.9
3,818,179	+		TX73_017460	0.74	-0.6
3,818,181	+		TX73_017460	0.74	-0.5
3,818,182	-		TX73_017460	0.74	+0.7
3,818,187	-		TX73_017460	0.74	-0.1
3,818,194	-		TX73_017460	0.74	-0.2
3,818,198	+		TX73_017460	0.74	-0.0
3,818,200	+		TX73_017460	0.74	+0.3
3,818,208	-		TX73_017460	0.75	+0.2
3,818,300	+		TX73_017460	0.77	+0.2
3,818,300	+		TX73_017460	0.77	+0.2
3,818,301	-		TX73_017460	0.77	-0.5
3,818,326	-		TX73_017460	0.78	-0.4
3,818,340	+		TX73_017460	0.79	+0.5
3,818,348	-		TX73_017460	0.79	+0.6
3,818,348	-		TX73_017460	0.79	-0.2
3,818,411	+		TX73_017460	0.81	-0.6
3,818,419	-		TX73_017460	0.81	+0.6
3,818,425	-		TX73_017460	0.81	-0.6
3,818,436	+		TX73_017460	0.82	-1.0
3,818,458	-		TX73_017460	0.82	+0.6
3,818,458	-		TX73_017460	0.82	-0.1
3,818,503	+		TX73_017460	0.84	+0.7
3,818,504	+		TX73_017460	0.84	-1.6
3,818,506	-		TX73_017460	0.84	+0.6
3,818,545	+		TX73_017460	0.85	-0.2
3,818,545	+		TX73_017460	0.85	+0.6
3,818,553	-		TX73_017460	0.85	+0.6
3,818,579	-		TX73_017460	0.86	+1.4
3,818,596	-		TX73_017460	0.86	+0.5
3,818,609	+		TX73_017460	0.87	+1.4
3,818,609	+		TX73_017460	0.87	+0.2
3,818,617	-		TX73_017460	0.87	-2.0
3,818,617	-		TX73_017460	0.87	-0.6
3,818,630	-		TX73_017460	0.87	-1.1
3,818,667	+		TX73_017460	0.89	-0.4
3,818,674	+		TX73_017460	0.89	-2.3
3,818,687	+		TX73_017460	0.89	-0.5
3,818,687	+		TX73_017460	0.89	+0.1
3,818,695	-		TX73_017460	0.89	-0.1
3,818,695	-		TX73_017460	0.89	+0.1
3,818,695	-		TX73_017460	0.89	+0.1
3,818,695	-		TX73_017460	0.89	+0.5
3,818,695	-		TX73_017460	0.89	-0.1
3,818,695	-		TX73_017460	0.89	-1.4
3,818,695	-		TX73_017460	0.89	-0.2
3,818,695	-		TX73_017460	0.89	-0.7
3,818,695	-		TX73_017460	0.89	-0.3
3,818,722	+				-0.1
3,818,727	-				+0.3
3,818,742	-				+0.3
3,818,768	+				+0.7
3,818,768	-				-0.5
3,818,780	+				-0.4
3,818,790	+				+1.1
3,818,798	-				-0.4
3,818,807	+				-1.0
3,818,815	-				+0.2
3,818,819	-				-0.2
3,818,847	-				+0.2
3,818,929	+				-0.9
3,818,929	+				+0.2
3,818,937	-				+0.0
3,818,960	+				+0.2
3,818,965	+				-2.2
3,818,966	-				+0.3
3,819,053	+				+0.2
3,819,061	-				-0.8
3,819,061	-				-0.5
3,819,061	-				+0.0
3,819,065	+				+0.6
3,819,112	+				+0.8
3,819,120	-				-1.5
3,819,129	+				+0.5
3,819,136	-				-0.2
3,819,136	-				+0.4
3,819,148	-				-0.8
3,819,153	+				+0.3
3,819,161	+				-0.9
3,819,163	-				+1.0
3,819,180	+				+0.4
3,819,182	-				+0.4
3,819,186	+				+0.3
3,819,197	+				-0.5
3,819,207	+				+0.2
3,819,268	-				-2.6
3,819,268	-				+0.5
3,819,279	+				-0.7
3,819,280	+				-0.0
3,819,286	+				-0.6
3,819,286	+				+0.4
3,819,294	+				+0.9
3,819,294	+				+0.5
3,819,294	+				+0.1
3,819,302	-				+0.1
3,819,312	-				-0.4
3,819,417	+				+0.2
3,819,425	-				-0.6
3,819,454	+				-1.0
3,819,455	+				-1.7
3,819,484	+				+0.5
3,819,484	+				-3.5
3,819,484	+				-0.6
3,819,484	+				+0.1
3,819,492	-				+0.4
3,819,492	-				+0.4
3,819,492	-				-0.6
3,819,492	-				+0.6
3,819,523	+				-0.1
3,819,531	-				-0.4
3,819,533	+				+0.3
3,819,539	-				-0.9
3,819,562	-		TX73_017465	0.11	-0.6
3,819,582	+		TX73_017465	0.13	+0.2
3,819,601	+		TX73_017465	0.16	+0.7
3,819,617	+		TX73_017465	0.18	-0.0
3,819,625	-		TX73_017465	0.20	+0.7
3,819,630	+		TX73_017465	0.20	+0.7
3,819,637	+		TX73_017465	0.21	-0.2
3,819,648	+		TX73_017465	0.23	+0.4
3,819,671	-		TX73_017465	0.26	-0.3
3,819,676	+		TX73_017465	0.27	-1.4
3,819,697	+		TX73_017465	0.30	+0.5
3,819,697	+		TX73_017465	0.30	+0.6
3,819,720	-		TX73_017465	0.33	-1.0
3,819,735	-		TX73_017465	0.35	-0.2
3,819,739	-		TX73_017465	0.36	+0.8
3,819,757	-		TX73_017465	0.38	+1.5
3,819,789	-		TX73_017465	0.43	+0.9
3,819,795	+		TX73_017465	0.44	-1.3
3,819,854	+		TX73_017465	0.52	+1.9
3,819,892	+		TX73_017465	0.57	-0.2
3,819,957	-		TX73_017465	0.67	+0.7
3,819,988	-		TX73_017465	0.71	+1.1
3,820,023	+		TX73_017465	0.76	-0.4
3,820,031	-		TX73_017465	0.77	-0.4