Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_009880

Experiment: NFM_No_Mo with acetate trihydrate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM_No_Mo with acetate trihydrate
2,149,233	+		TX73_009875	0.40	-0.3
2,149,241	+		TX73_009875	0.40	+0.1
2,149,241	+		TX73_009875	0.40	+0.6
2,149,241	+		TX73_009875	0.40	-0.4
2,149,249	-		TX73_009875	0.41	-0.2
2,149,259	-		TX73_009875	0.41	+0.9
2,149,298	+		TX73_009875	0.44	+0.1
2,149,305	+		TX73_009875	0.45	+0.0
2,149,306	-		TX73_009875	0.45	-0.3
2,149,317	+		TX73_009875	0.46	+0.2
2,149,325	-		TX73_009875	0.46	-0.2
2,149,336	-		TX73_009875	0.47	+0.3
2,149,339	-		TX73_009875	0.47	+2.1
2,149,341	+		TX73_009875	0.47	-0.3
2,149,349	-		TX73_009875	0.48	-0.7
2,149,356	-		TX73_009875	0.48	-0.1
2,149,381	+		TX73_009875	0.50	-0.1
2,149,394	-		TX73_009875	0.51	-0.6
2,149,398	+		TX73_009875	0.51	+1.0
2,149,398	+		TX73_009875	0.51	+0.0
2,149,406	-		TX73_009875	0.52	-0.0
2,149,448	-		TX73_009875	0.55	-0.6
2,149,485	+		TX73_009875	0.58	-1.5
2,149,485	+		TX73_009875	0.58	+0.4
2,149,494	+		TX73_009875	0.58	+1.0
2,149,504	+		TX73_009875	0.59	+0.3
2,149,514	-		TX73_009875	0.60	-0.5
2,149,523	+		TX73_009875	0.60	+0.5
2,149,530	+		TX73_009875	0.61	-0.8
2,149,541	+		TX73_009875	0.62	+0.2
2,149,542	+		TX73_009875	0.62	-0.8
2,149,550	-		TX73_009875	0.62	-0.2
2,149,550	-		TX73_009875	0.62	-0.7
2,149,550	-		TX73_009875	0.62	+0.9
2,149,550	-		TX73_009875	0.62	+1.7
2,149,571	-		TX73_009875	0.64	-0.6
2,149,571	-		TX73_009875	0.64	+0.2
2,149,572	-		TX73_009875	0.64	-0.5
2,149,581	-		TX73_009875	0.65	+0.9
2,149,615	-		TX73_009875	0.67	-0.6
2,149,619	-		TX73_009875	0.67	+0.2
2,149,636	-		TX73_009875	0.69	-0.5
2,149,653	+		TX73_009875	0.70	-0.4
2,149,658	+		TX73_009875	0.70	-1.4
2,149,661	+		TX73_009875	0.70	+0.1
2,149,661	-		TX73_009875	0.70	-1.9
2,149,661	-		TX73_009875	0.70	+1.9
2,149,676	+		TX73_009875	0.71	-0.4
2,149,679	-		TX73_009875	0.72	-1.2
2,149,690	+		TX73_009875	0.72	+0.3
2,149,693	-		TX73_009875	0.73	+0.3
2,149,695	+		TX73_009875	0.73	+0.0
2,149,696	-		TX73_009875	0.73	+0.2
2,149,698	-		TX73_009875	0.73	-0.8
2,149,698	-		TX73_009875	0.73	+0.4
2,149,698	-		TX73_009875	0.73	+0.1
2,149,698	-		TX73_009875	0.73	-0.2
2,149,736	+		TX73_009875	0.76	-0.5
2,149,738	+		TX73_009875	0.76	-0.3
2,149,738	+		TX73_009875	0.76	-1.0
2,149,738	+		TX73_009875	0.76	+1.0
2,149,746	+		TX73_009875	0.76	+1.0
2,149,746	-		TX73_009875	0.76	-0.2
2,149,753	-		TX73_009875	0.77	-0.4
2,149,754	-		TX73_009875	0.77	+1.1
2,149,761	+		TX73_009875	0.78	-0.7
2,149,769	-		TX73_009875	0.78	+0.1
2,149,820	+		TX73_009875	0.82	-0.9
2,149,822	+		TX73_009875	0.82	+0.1
2,149,827	+		TX73_009875	0.82	-0.7
2,149,830	-		TX73_009875	0.82	-0.2
2,149,846	-		TX73_009875	0.84	+0.9
2,149,883	+		TX73_009875	0.86	-0.5
2,149,883	+		TX73_009875	0.86	+0.3
2,149,903	-		TX73_009875	0.88	-0.2
2,150,003	-				-0.3
2,150,008	+				-0.3
2,150,031	+				-0.9
2,150,050	+				-0.8
2,150,052	+				+0.5
2,150,055	+				+0.1
2,150,058	-				-0.2
2,150,135	+				-0.3
2,150,137	-				-0.2
2,150,143	-				-0.5
2,150,158	-				+0.1
2,150,166	+				+0.7
2,150,166	+				+0.5
2,150,169	-				+0.7
2,150,173	+				+0.4
2,150,180	+				-0.6
2,150,181	+				+0.1
2,150,229	+		TX73_009880	0.13	-0.8
2,150,229	+		TX73_009880	0.13	-0.3
2,150,231	-		TX73_009880	0.13	-0.7
2,150,237	-		TX73_009880	0.14	+0.3
2,150,237	-		TX73_009880	0.14	-0.3
2,150,246	+		TX73_009880	0.16	-1.4
2,150,254	-		TX73_009880	0.18	-0.7
2,150,267	-		TX73_009880	0.21	-0.7
2,150,272	-		TX73_009880	0.22	-0.9
2,150,313	+		TX73_009880	0.31	-0.1
2,150,365	-		TX73_009880	0.42	-0.3
2,150,379	-		TX73_009880	0.45	-0.6
2,150,381	+		TX73_009880	0.45	+0.3
2,150,381	+		TX73_009880	0.45	+0.2
2,150,389	-		TX73_009880	0.47	+0.3
2,150,414	+		TX73_009880	0.52	+0.2
2,150,447	+		TX73_009880	0.60	+0.6
2,150,447	-		TX73_009880	0.60	+0.6
2,150,484	+		TX73_009880	0.68	+0.4
2,150,492	-		TX73_009880	0.69	-0.8
2,150,498	-		TX73_009880	0.71	-0.2
2,150,508	-		TX73_009880	0.73	-0.2
2,150,510	+		TX73_009880	0.73	-1.0
2,150,510	+		TX73_009880	0.73	-0.4
2,150,513	-		TX73_009880	0.74	-0.3
2,150,518	-		TX73_009880	0.75	-0.5
2,150,518	-		TX73_009880	0.75	+0.7
2,150,518	-		TX73_009880	0.75	-0.6
2,150,518	-		TX73_009880	0.75	-0.2
2,150,528	-		TX73_009880	0.77	+0.6
2,150,576	-		TX73_009880	0.87	+0.0
2,150,589	+				+0.1
2,150,599	+				-2.6
2,150,599	+				+0.1
2,150,599	+				-0.1
2,150,599	+				+0.8
2,150,599	+				-0.6
2,150,599	+				-0.2
2,150,599	+				+0.7
2,150,599	+				-0.5
2,150,599	+				-1.1
2,150,599	+				+0.1
2,150,607	-				-0.7
2,150,607	-				+0.2
2,150,607	-				-0.5
2,150,609	+				+0.6
2,150,613	+				-0.3
2,150,621	-				+1.9
2,150,621	-				+1.1
2,150,621	-				-0.9
2,150,623	+				+0.4
2,150,623	+				+0.7
2,150,623	+				+0.1
2,150,623	+				+0.5
2,150,623	+				-0.9
2,150,623	+				-0.3
2,150,623	+				-1.1
2,150,623	+				-1.2
2,150,626	-				+0.3
2,150,628	+				+0.4
2,150,631	-				-0.6
2,150,631	-				-0.1
2,150,631	-				-0.0
2,150,631	-				+0.5
2,150,652	-				+0.0
2,150,700	+				+1.1
2,150,700	+				+0.5
2,150,700	+				-1.2
2,150,700	+				-0.0
2,150,708	-				+0.6
2,150,708	-				+0.1
2,150,708	-				+0.7
2,150,708	-				-0.1
2,150,708	-				+0.8
2,150,708	-				-1.8
2,150,708	-				-0.4
2,150,737	+				-0.3
2,150,737	+				+0.1
2,150,743	-				+1.7
2,150,745	-				+0.9
2,150,746	+				+0.4
2,150,746	+				-0.4
2,150,776	+				+1.7
2,150,776	+				+0.3
2,150,776	+				+0.0
2,150,776	+				+1.1
2,150,776	-				+0.1
2,150,777	-				+0.5
2,150,777	-				+0.6
2,150,801	-				+0.1
2,150,804	+				+0.1
2,150,829	+				+0.1
2,150,861	+				-0.0
2,150,861	+				+0.3
2,150,867	+				-1.1
2,150,880	+				+0.3
2,150,903	-				+0.1
2,150,903	-				-0.4
2,150,913	+				+0.5
2,150,913	+				+0.2
2,150,913	+				-1.4
2,150,913	+				+0.7
2,150,913	+				+0.2
2,150,915	+				+1.3
2,150,921	-				-2.7
2,150,921	-				+0.7
2,150,921	-				-0.1
2,150,923	+				-0.2
2,150,943	-				-0.0
2,150,948	+				+0.0
2,150,956	-				-1.3
2,150,966	-				+1.0
2,150,966	-				-0.4
2,150,982	-				-0.3
2,150,986	+				-0.1
2,150,995	-				-0.5
2,151,017	+		TX73_009885	0.11	+0.7
2,151,025	-		TX73_009885	0.12	+0.3
2,151,030	+		TX73_009885	0.12	+0.4
2,151,041	+		TX73_009885	0.13	-0.0
2,151,044	+		TX73_009885	0.13	+1.4
2,151,044	-		TX73_009885	0.13	+0.4
2,151,049	+		TX73_009885	0.14	-0.3
2,151,121	-		TX73_009885	0.19	-0.4
2,151,121	-		TX73_009885	0.19	+0.4
2,151,123	+		TX73_009885	0.19	+0.5
2,151,126	-		TX73_009885	0.19	-0.2
2,151,131	-		TX73_009885	0.20	+0.5
2,151,136	+		TX73_009885	0.20	-0.6
2,151,143	+		TX73_009885	0.20	+0.3
2,151,156	-		TX73_009885	0.21	-0.2
2,151,167	-		TX73_009885	0.22	+0.2
2,151,176	+		TX73_009885	0.23	+0.0
2,151,213	-		TX73_009885	0.25	-0.0
2,151,240	+		TX73_009885	0.27	-0.2
2,151,249	+		TX73_009885	0.28	+0.6
2,151,253	-		TX73_009885	0.28	-0.9
2,151,262	+		TX73_009885	0.29	+0.4
2,151,262	+		TX73_009885	0.29	-0.2
2,151,270	-		TX73_009885	0.29	+0.6
2,151,300	-		TX73_009885	0.32	+0.5
2,151,302	+		TX73_009885	0.32	-0.6
2,151,302	+		TX73_009885	0.32	-0.0
2,151,305	-		TX73_009885	0.32	+0.2
2,151,305	-		TX73_009885	0.32	-0.5
2,151,342	+		TX73_009885	0.35	-0.3
2,151,378	+		TX73_009885	0.37	+1.3
2,151,388	+		TX73_009885	0.38	-1.6
2,151,417	+		TX73_009885	0.40	+0.8
2,151,429	+		TX73_009885	0.41	-0.0
2,151,441	+		TX73_009885	0.42	-0.8
2,151,450	+		TX73_009885	0.42	-0.5
2,151,450	-		TX73_009885	0.42	-0.2
2,151,463	-		TX73_009885	0.43	-0.7
2,151,494	+		TX73_009885	0.45	+0.4
2,151,542	-		TX73_009885	0.49	+0.3
2,151,583	+		TX73_009885	0.52	+0.1
2,151,602	+		TX73_009885	0.53	+0.6
2,151,606	-		TX73_009885	0.53	+0.4
2,151,620	-		TX73_009885	0.54	-0.4
2,151,620	-		TX73_009885	0.54	-0.0
2,151,620	-		TX73_009885	0.54	-1.0
2,151,620	-		TX73_009885	0.54	-0.3
2,151,620	-		TX73_009885	0.54	-0.9
2,151,620	-		TX73_009885	0.54	-0.4
2,151,630	+		TX73_009885	0.55	+0.0
2,151,631	+		TX73_009885	0.55	+0.6
2,151,631	+		TX73_009885	0.55	+0.4