Experiment: NFM_No_Mo with acetate trihydrate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_007410 and TX73_007415 are separated by 188 nucleotides TX73_007415 and TX73_007420 are separated by 46 nucleotides
TX73_007410: TX73_007410 - GntR family transcriptional regulator, at 1,599,720 to 1,600,535
_007410
TX73_007415: TX73_007415 - hypothetical protein, at 1,600,724 to 1,600,864
_007415
TX73_007420: TX73_007420 - ABC transporter ATP-binding protein, at 1,600,911 to 1,601,912
_007420
Position (kb)
1600
1601 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1599.726 kb on - strand at 1599.727 kb on - strand at 1599.727 kb on - strand at 1599.736 kb on - strand at 1599.747 kb on - strand at 1599.748 kb on - strand at 1599.761 kb on - strand at 1599.762 kb on + strand at 1599.770 kb on - strand at 1599.780 kb on + strand at 1599.867 kb on - strand, within TX73_007410 at 1599.867 kb on - strand, within TX73_007410 at 1599.869 kb on + strand, within TX73_007410 at 1599.869 kb on + strand, within TX73_007410 at 1599.869 kb on - strand, within TX73_007410 at 1599.877 kb on - strand, within TX73_007410 at 1599.911 kb on - strand, within TX73_007410 at 1599.925 kb on + strand, within TX73_007410 at 1600.052 kb on + strand, within TX73_007410 at 1600.072 kb on - strand, within TX73_007410 at 1600.085 kb on + strand, within TX73_007410 at 1600.097 kb on + strand, within TX73_007410 at 1600.122 kb on + strand, within TX73_007410 at 1600.132 kb on + strand, within TX73_007410 at 1600.142 kb on + strand, within TX73_007410 at 1600.192 kb on + strand, within TX73_007410 at 1600.225 kb on + strand, within TX73_007410 at 1600.275 kb on - strand, within TX73_007410 at 1600.341 kb on - strand, within TX73_007410 at 1600.346 kb on + strand, within TX73_007410 at 1600.437 kb on - strand, within TX73_007410 at 1600.437 kb on - strand, within TX73_007410 at 1600.460 kb on + strand at 1600.487 kb on + strand at 1600.529 kb on - strand at 1600.559 kb on - strand at 1600.580 kb on - strand at 1600.627 kb on + strand at 1600.633 kb on + strand at 1600.712 kb on - strand at 1600.831 kb on - strand, within TX73_007415 at 1600.861 kb on - strand at 1600.861 kb on - strand at 1600.989 kb on - strand at 1601.105 kb on + strand, within TX73_007420 at 1601.110 kb on + strand, within TX73_007420 at 1601.118 kb on + strand, within TX73_007420 at 1601.118 kb on - strand, within TX73_007420 at 1601.118 kb on - strand, within TX73_007420 at 1601.153 kb on + strand, within TX73_007420 at 1601.209 kb on + strand, within TX73_007420 at 1601.248 kb on - strand, within TX73_007420 at 1601.333 kb on + strand, within TX73_007420 at 1601.387 kb on + strand, within TX73_007420 at 1601.400 kb on + strand, within TX73_007420 at 1601.485 kb on + strand, within TX73_007420 at 1601.490 kb on + strand, within TX73_007420 at 1601.498 kb on - strand, within TX73_007420 at 1601.588 kb on - strand, within TX73_007420 at 1601.669 kb on + strand, within TX73_007420 at 1601.685 kb on - strand, within TX73_007420 at 1601.707 kb on - strand, within TX73_007420 at 1601.755 kb on + strand, within TX73_007420 at 1601.797 kb on + strand, within TX73_007420
Per-strain Table
Position Strand Gene LocusTag Fraction NFM_No_Mo with acetate trihydrate remove 1,599,726 - +0.0 1,599,727 - +0.3 1,599,727 - +0.5 1,599,736 - -0.2 1,599,747 - +0.1 1,599,748 - +0.8 1,599,761 - -0.4 1,599,762 + -3.7 1,599,770 - +0.8 1,599,780 + -0.0 1,599,867 - TX73_007410 0.18 -0.2 1,599,867 - TX73_007410 0.18 +0.7 1,599,869 + TX73_007410 0.18 -0.2 1,599,869 + TX73_007410 0.18 +0.2 1,599,869 - TX73_007410 0.18 -0.2 1,599,877 - TX73_007410 0.19 +0.1 1,599,911 - TX73_007410 0.23 +0.9 1,599,925 + TX73_007410 0.25 -0.2 1,600,052 + TX73_007410 0.41 -0.0 1,600,072 - TX73_007410 0.43 -0.3 1,600,085 + TX73_007410 0.45 +0.8 1,600,097 + TX73_007410 0.46 +0.1 1,600,122 + TX73_007410 0.49 +0.6 1,600,132 + TX73_007410 0.50 +0.6 1,600,142 + TX73_007410 0.52 +1.4 1,600,192 + TX73_007410 0.58 +0.5 1,600,225 + TX73_007410 0.62 -0.5 1,600,275 - TX73_007410 0.68 -0.4 1,600,341 - TX73_007410 0.76 +0.5 1,600,346 + TX73_007410 0.77 +0.7 1,600,437 - TX73_007410 0.88 -0.2 1,600,437 - TX73_007410 0.88 +0.5 1,600,460 + +0.3 1,600,487 + -0.2 1,600,529 - -1.0 1,600,559 - -0.9 1,600,580 - -0.1 1,600,627 + +0.8 1,600,633 + +0.5 1,600,712 - -0.2 1,600,831 - TX73_007415 0.76 -0.3 1,600,861 - -0.4 1,600,861 - +0.0 1,600,989 - -0.3 1,601,105 + TX73_007420 0.19 +0.3 1,601,110 + TX73_007420 0.20 +0.6 1,601,118 + TX73_007420 0.21 -0.5 1,601,118 - TX73_007420 0.21 -0.7 1,601,118 - TX73_007420 0.21 +0.9 1,601,153 + TX73_007420 0.24 +1.0 1,601,209 + TX73_007420 0.30 +1.0 1,601,248 - TX73_007420 0.34 +0.6 1,601,333 + TX73_007420 0.42 +0.1 1,601,387 + TX73_007420 0.48 +1.2 1,601,400 + TX73_007420 0.49 +0.5 1,601,485 + TX73_007420 0.57 +1.0 1,601,490 + TX73_007420 0.58 +0.9 1,601,498 - TX73_007420 0.59 +0.4 1,601,588 - TX73_007420 0.68 +0.4 1,601,669 + TX73_007420 0.76 -0.0 1,601,685 - TX73_007420 0.77 +0.7 1,601,707 - TX73_007420 0.79 +0.5 1,601,755 + TX73_007420 0.84 +0.5 1,601,797 + TX73_007420 0.88 -1.0
Or see this region's nucleotide sequence