Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011815

Experiment: NFM_No_Mo_Plus_VCl3 with acetate trihydrate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM_No_Mo_Plus_VCl3 with acetate trihydrate
2,585,044	-		TX73_011800	0.74	+0.2
2,585,044	-		TX73_011800	0.74	-0.7
2,585,045	-		TX73_011800	0.74	-0.7
2,585,048	+		TX73_011800	0.74	-0.1
2,585,054	-		TX73_011800	0.75	-1.0
2,585,056	-		TX73_011800	0.75	-0.8
2,585,069	-		TX73_011800	0.76	-1.1
2,585,081	+		TX73_011800	0.78	-0.2
2,585,084	+		TX73_011800	0.78	-0.5
2,585,092	-		TX73_011800	0.79	+0.8
2,585,094	+		TX73_011800	0.79	+0.1
2,585,094	+		TX73_011800	0.79	+0.2
2,585,102	-		TX73_011800	0.80	+0.5
2,585,102	-		TX73_011800	0.80	+0.2
2,585,102	-		TX73_011800	0.80	-0.2
2,585,131	+		TX73_011800	0.83	-0.0
2,585,131	+		TX73_011800	0.83	+0.1
2,585,134	-		TX73_011800	0.83	-1.2
2,585,139	-		TX73_011800	0.83	-0.5
2,585,144	-		TX73_011800	0.84	+0.4
2,585,168	-		TX73_011800	0.86	+0.7
2,585,214	+				+0.4
2,585,215	+				-0.4
2,585,223	-				-0.1
2,585,223	-				+0.2
2,585,223	-				-1.0
2,585,244	-				-0.2
2,585,268	-				+0.1
2,585,296	+				-0.5
2,585,301	+				+0.3
2,585,309	+				-0.8
2,585,309	-				+0.8
2,585,316	+				-1.6
2,585,324	-				-1.1
2,585,329	-				-1.8
2,585,329	-				-0.2
2,585,666	+				-2.4
2,585,679	-				+0.1
2,585,709	+		TX73_011810	0.11	-0.7
2,585,739	+		TX73_011810	0.22	+0.2
2,585,759	+		TX73_011810	0.29	-0.1
2,585,759	+		TX73_011810	0.29	-1.7
2,585,767	-		TX73_011810	0.32	+0.1
2,585,767	-		TX73_011810	0.32	+0.1
2,585,767	-		TX73_011810	0.32	+0.4
2,585,767	-		TX73_011810	0.32	-0.5
2,585,777	-		TX73_011810	0.36	+0.4
2,585,777	-		TX73_011810	0.36	+0.7
2,585,812	+		TX73_011810	0.48	+0.5
2,585,812	+		TX73_011810	0.48	-0.4
2,585,817	+		TX73_011810	0.50	+0.2
2,585,817	+		TX73_011810	0.50	-0.3
2,585,822	+		TX73_011810	0.52	+1.0
2,585,839	+		TX73_011810	0.58	-0.1
2,585,847	-		TX73_011810	0.61	-0.9
2,585,847	-		TX73_011810	0.61	+0.1
2,585,849	+		TX73_011810	0.62	+0.0
2,585,857	-		TX73_011810	0.64	-0.2
2,585,857	-		TX73_011810	0.64	-1.3
2,585,867	-		TX73_011810	0.68	+0.8
2,585,867	-		TX73_011810	0.68	-0.5
2,585,937	-				-0.7
2,585,937	-				-0.9
2,585,938	-				+0.2
2,585,938	-				+0.9
2,585,973	-				-0.9
2,586,034	+				+0.1
2,586,039	+				+1.1
2,586,039	+				-1.5
2,586,042	-				+0.2
2,586,061	-				-1.2
2,586,062	-				-1.9
2,586,079	+		TX73_011815	0.11	-2.1
2,586,087	-		TX73_011815	0.14	-1.7
2,586,087	-		TX73_011815	0.14	-1.2
2,586,100	+		TX73_011815	0.18	-0.4
2,586,110	-		TX73_011815	0.21	-1.2
2,586,119	+		TX73_011815	0.24	-2.8
2,586,127	-		TX73_011815	0.27	-1.0
2,586,137	-		TX73_011815	0.30	-3.0
2,586,157	-		TX73_011815	0.36	-4.1
2,586,169	+		TX73_011815	0.40	-1.9
2,586,180	+		TX73_011815	0.43	-2.2
2,586,198	+		TX73_011815	0.49	-1.7
2,586,205	+		TX73_011815	0.51	-2.0
2,586,205	+		TX73_011815	0.51	-2.9
2,586,213	-		TX73_011815	0.54	-1.1
2,586,213	-		TX73_011815	0.54	-1.3
2,586,215	+		TX73_011815	0.55	-1.3
2,586,215	+		TX73_011815	0.55	-0.5
2,586,215	+		TX73_011815	0.55	-3.5
2,586,215	+		TX73_011815	0.55	-1.0
2,586,215	+		TX73_011815	0.55	-1.0
2,586,223	-		TX73_011815	0.57	-2.1
2,586,223	-		TX73_011815	0.57	-1.1
2,586,223	-		TX73_011815	0.57	-2.3
2,586,233	-		TX73_011815	0.60	-1.5
2,586,243	-		TX73_011815	0.63	-1.2
2,586,267	+		TX73_011815	0.71	-1.0
2,586,267	+		TX73_011815	0.71	-1.2
2,586,275	-		TX73_011815	0.74	-2.1
2,586,293	-		TX73_011815	0.79	-0.8
2,586,294	+		TX73_011815	0.80	-3.2
2,586,294	+		TX73_011815	0.80	-2.1
2,586,317	+		TX73_011815	0.87	-1.5
2,586,322	+		TX73_011815	0.89	+1.1
2,586,329	-				-1.8
2,586,329	-				-2.1
2,586,350	-				-1.3
2,586,353	+				-0.1
2,586,402	-				-0.7
2,586,432	+				+0.4
2,586,440	-				-0.6
2,586,441	-				-0.3
2,586,451	-				+0.2
2,586,475	-				-0.0
2,586,491	+				-0.1
2,586,495	+				+1.4
2,586,495	+				-0.7
2,586,495	+				-0.0
2,586,501	-				-0.4
2,586,503	-				-0.7
2,586,503	-				-0.2
2,586,503	-				-1.3
2,586,503	-				-0.1
2,586,507	+				-0.7
2,586,513	-				-0.3
2,586,515	-				-0.6
2,586,515	-				-0.5
2,586,525	-				-0.2
2,586,531	+				+0.9
2,586,556	-				+0.1
2,586,567	+				+0.4
2,586,573	+				+0.7
2,586,606	-				-0.6
2,586,620	+				+0.1
2,586,620	+				-0.1
2,586,620	+				+0.3
2,586,620	+				-0.4
2,586,620	+				+0.9
2,586,628	-				+0.4
2,586,628	-				-0.7
2,586,630	-				-0.1
2,586,643	+				-0.1
2,586,643	+				-0.8
2,586,643	+				-1.1
2,586,643	+				-0.3
2,586,651	-				+0.8
2,586,700	+				-1.0
2,586,700	+				-0.5
2,586,703	-				+0.5
2,586,709	-				+0.5
2,586,710	+				-1.9
2,586,712	+				-0.5
2,586,758	+		TX73_011820	0.10	+0.6
2,586,758	+		TX73_011820	0.10	+2.1
2,586,758	+		TX73_011820	0.10	-0.4
2,586,758	+		TX73_011820	0.10	-0.0
2,586,758	+		TX73_011820	0.10	-0.9
2,586,758	+		TX73_011820	0.10	-0.6
2,586,758	+		TX73_011820	0.10	+0.2
2,586,764	+		TX73_011820	0.11	-2.3
2,586,764	+		TX73_011820	0.11	-0.3
2,586,764	+		TX73_011820	0.11	+0.4
2,586,764	+		TX73_011820	0.11	-1.8
2,586,766	-		TX73_011820	0.11	-0.4
2,586,766	-		TX73_011820	0.11	-0.2
2,586,766	-		TX73_011820	0.11	-0.6
2,586,766	-		TX73_011820	0.11	-1.5
2,586,766	-		TX73_011820	0.11	-0.0
2,586,766	-		TX73_011820	0.11	+0.1
2,586,766	-		TX73_011820	0.11	-0.7
2,586,766	-		TX73_011820	0.11	-0.3
2,586,766	-		TX73_011820	0.11	+0.3
2,586,766	-		TX73_011820	0.11	-2.7
2,586,766	-		TX73_011820	0.11	-0.1
2,586,766	-		TX73_011820	0.11	+0.4
2,586,766	-		TX73_011820	0.11	-0.9
2,586,766	-		TX73_011820	0.11	+0.3
2,586,772	-		TX73_011820	0.11	+0.2
2,586,779	+		TX73_011820	0.12	-0.7
2,586,826	+		TX73_011820	0.15	-0.3
2,586,838	+		TX73_011820	0.15	-1.8
2,586,838	+		TX73_011820	0.15	+1.5
2,586,839	-		TX73_011820	0.15	-0.8
2,586,870	+		TX73_011820	0.17	+0.3
2,586,879	+		TX73_011820	0.18	+1.6
2,586,881	+		TX73_011820	0.18	-1.2
2,586,889	-		TX73_011820	0.19	-1.6
2,586,889	-		TX73_011820	0.19	-0.7
2,586,896	-		TX73_011820	0.19	-0.4
2,586,907	+		TX73_011820	0.20	+0.1
2,586,913	-		TX73_011820	0.20	-0.1
2,586,921	+		TX73_011820	0.20	+0.2
2,586,925	-		TX73_011820	0.21	-1.5
2,586,930	-		TX73_011820	0.21	+0.5
2,586,957	-		TX73_011820	0.23	+0.3
2,586,959	+		TX73_011820	0.23	-2.1
2,586,976	+		TX73_011820	0.24	-0.2
2,586,991	+		TX73_011820	0.25	-2.8
2,586,991	+		TX73_011820	0.25	-0.0
2,586,999	-		TX73_011820	0.25	+0.7
2,586,999	-		TX73_011820	0.25	-0.2
2,587,009	-		TX73_011820	0.26	-0.2
2,587,009	-		TX73_011820	0.26	-0.2
2,587,065	-		TX73_011820	0.29	-0.0
2,587,075	+		TX73_011820	0.30	-0.1
2,587,075	+		TX73_011820	0.30	+0.8
2,587,075	+		TX73_011820	0.30	-0.5
2,587,075	+		TX73_011820	0.30	-1.4
2,587,083	-		TX73_011820	0.30	-2.2
2,587,092	-		TX73_011820	0.31	-0.2
2,587,176	-		TX73_011820	0.36	-0.1
2,587,189	+		TX73_011820	0.37	-0.4
2,587,189	+		TX73_011820	0.37	-0.0
2,587,213	+		TX73_011820	0.38	-1.0
2,587,228	+		TX73_011820	0.39	-0.2
2,587,230	+		TX73_011820	0.39	-3.0
2,587,233	+		TX73_011820	0.40	-2.2
2,587,297	-		TX73_011820	0.44	-0.9
2,587,297	-		TX73_011820	0.44	-0.4
2,587,312	+		TX73_011820	0.45	+1.0
2,587,312	+		TX73_011820	0.45	+0.5
2,587,330	-		TX73_011820	0.46	+0.9
2,587,337	-		TX73_011820	0.46	-0.3
2,587,344	-		TX73_011820	0.46	-1.0
2,587,345	-		TX73_011820	0.47	-0.4