Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014630

Experiment: Sulfoacetic sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sulfoacetic sulfur source
3,198,082	-				+0.3
3,198,103	+				-0.1
3,198,111	-				+0.4
3,198,111	-				-0.6
3,198,111	-				-0.3
3,198,111	-				-0.2
3,198,113	+				+0.3
3,198,113	+				-0.1
3,198,113	+				+0.5
3,198,128	-				-0.2
3,198,133	+				+0.7
3,198,141	-				+0.2
3,198,141	-				+0.4
3,198,159	+				+0.0
3,198,159	+				+0.6
3,198,159	+				+1.0
3,198,159	+				-0.4
3,198,159	+				+0.0
3,198,159	+				+1.0
3,198,159	+				+0.6
3,198,167	-				+0.5
3,198,167	-				-0.1
3,198,167	-				+0.4
3,198,167	-				+0.2
3,198,167	-				+0.4
3,198,167	-				+0.5
3,198,167	-				+0.4
3,198,167	-				-0.1
3,198,167	-				+0.0
3,198,167	-				+0.1
3,198,186	-				-0.2
3,198,186	-				+0.8
3,198,187	+				+0.3
3,198,190	-				-0.4
3,198,197	+				-0.1
3,198,198	+				+1.2
3,198,205	-				-0.4
3,198,218	+				+0.2
3,198,218	+				-0.3
3,198,218	+				-0.0
3,198,218	+				-0.5
3,198,226	-				-0.4
3,198,228	+				+0.5
3,198,236	+				-0.5
3,198,242	+				+0.6
3,198,247	-				+0.9
3,198,259	+				-0.5
3,198,267	-				-0.2
3,198,355	+		TX73_014625	0.12	+0.8
3,198,360	+		TX73_014625	0.13	+0.2
3,198,364	-		TX73_014625	0.15	-0.0
3,198,368	-		TX73_014625	0.16	-0.1
3,198,374	+		TX73_014625	0.17	-0.2
3,198,375	+		TX73_014625	0.17	-0.6
3,198,383	-		TX73_014625	0.19	+0.3
3,198,421	-		TX73_014625	0.29	-0.2
3,198,453	+		TX73_014625	0.37	-0.0
3,198,460	+		TX73_014625	0.39	+0.5
3,198,461	-		TX73_014625	0.39	-0.3
3,198,473	+		TX73_014625	0.42	-0.1
3,198,473	+		TX73_014625	0.42	-0.1
3,198,511	+		TX73_014625	0.52	-1.0
3,198,512	-		TX73_014625	0.52	-0.1
3,198,526	-		TX73_014625	0.56	-0.5
3,198,526	-		TX73_014625	0.56	-0.7
3,198,527	-		TX73_014625	0.56	-2.5
3,198,582	-		TX73_014625	0.70	-0.8
3,198,603	+		TX73_014625	0.75	-1.4
3,198,614	-		TX73_014625	0.78	-1.2
3,198,674	+				+0.5
3,198,682	-				+0.6
3,198,721	+				+0.1
3,198,721	+				-0.2
3,198,729	-				+1.0
3,198,729	-				-0.0
3,198,736	+				-0.1
3,198,764	-				+0.4
3,198,788	+				-0.3
3,198,796	-				-0.3
3,198,796	-				+1.3
3,198,798	-				-0.2
3,198,814	-				+0.8
3,198,816	+				-0.3
3,198,816	+				-0.7
3,198,824	-				-0.7
3,198,839	+				+0.3
3,198,844	+				+0.0
3,198,850	-				+0.2
3,198,852	-				-0.9
3,198,852	-				+0.0
3,198,856	+				+0.4
3,198,861	-				+0.2
3,198,869	-				-0.1
3,198,877	+				-1.0
3,198,921	+				+0.1
3,198,927	-				-0.9
3,198,945	+				-0.3
3,198,948	-				-0.3
3,198,981	+				+0.9
3,198,981	+				-0.1
3,198,989	-				+0.3
3,198,989	-				+0.4
3,198,989	-				+0.2
3,198,989	-				+0.6
3,198,989	-				-0.7
3,199,032	-				-0.4
3,199,034	+				+0.6
3,199,042	-				+0.3
3,199,060	+				+1.2
3,199,063	-				+0.3
3,199,084	+				-0.3
3,199,091	-				-0.2
3,199,092	+				+0.2
3,199,100	-				+0.5
3,199,141	-				+0.4
3,199,182	-		TX73_014630	0.11	+0.0
3,199,186	+		TX73_014630	0.12	+0.2
3,199,194	-		TX73_014630	0.13	-0.2
3,199,197	+		TX73_014630	0.13	-0.7
3,199,204	-		TX73_014630	0.14	-0.6
3,199,204	-		TX73_014630	0.14	-0.6
3,199,205	-		TX73_014630	0.14	+0.5
3,199,205	-		TX73_014630	0.14	-0.1
3,199,205	-		TX73_014630	0.14	+0.7
3,199,207	+		TX73_014630	0.14	-0.1
3,199,207	+		TX73_014630	0.14	-0.6
3,199,207	+		TX73_014630	0.14	+0.3
3,199,215	-		TX73_014630	0.15	-0.6
3,199,215	-		TX73_014630	0.15	+0.3
3,199,226	+		TX73_014630	0.16	+0.3
3,199,231	+		TX73_014630	0.17	+0.4
3,199,231	+		TX73_014630	0.17	+0.1
3,199,231	+		TX73_014630	0.17	+0.2
3,199,231	+		TX73_014630	0.17	-0.9
3,199,239	-		TX73_014630	0.18	+0.1
3,199,239	-		TX73_014630	0.18	+1.5
3,199,239	-		TX73_014630	0.18	-0.6
3,199,241	+		TX73_014630	0.18	+0.5
3,199,244	-		TX73_014630	0.18	+1.0
3,199,244	-		TX73_014630	0.18	+0.2
3,199,246	+		TX73_014630	0.18	-0.1
3,199,253	+		TX73_014630	0.19	+0.5
3,199,273	+		TX73_014630	0.21	-0.6
3,199,273	+		TX73_014630	0.21	+0.1
3,199,273	+		TX73_014630	0.21	-0.7
3,199,281	-		TX73_014630	0.22	+0.1
3,199,281	-		TX73_014630	0.22	-0.1
3,199,286	-		TX73_014630	0.23	-0.6
3,199,286	-		TX73_014630	0.23	+0.9
3,199,286	-		TX73_014630	0.23	-1.2
3,199,288	+		TX73_014630	0.23	+0.1
3,199,288	+		TX73_014630	0.23	+0.1
3,199,288	+		TX73_014630	0.23	+0.4
3,199,288	+		TX73_014630	0.23	-0.1
3,199,288	+		TX73_014630	0.23	+0.2
3,199,288	+		TX73_014630	0.23	-0.0
3,199,288	+		TX73_014630	0.23	+0.6
3,199,288	-		TX73_014630	0.23	-0.6
3,199,288	-		TX73_014630	0.23	+0.4
3,199,288	-		TX73_014630	0.23	-1.4
3,199,296	-		TX73_014630	0.24	+0.2
3,199,296	-		TX73_014630	0.24	+0.3
3,199,327	-		TX73_014630	0.27	-1.1
3,199,356	+		TX73_014630	0.31	+0.4
3,199,356	+		TX73_014630	0.31	+0.3
3,199,360	+		TX73_014630	0.31	+0.0
3,199,389	+		TX73_014630	0.34	-0.6
3,199,407	+		TX73_014630	0.36	+0.5
3,199,409	+		TX73_014630	0.37	-0.1
3,199,409	+		TX73_014630	0.37	+0.1
3,199,409	+		TX73_014630	0.37	+0.3
3,199,417	-		TX73_014630	0.37	-0.5
3,199,417	-		TX73_014630	0.37	+0.5
3,199,417	-		TX73_014630	0.37	+0.9
3,199,417	-		TX73_014630	0.37	+0.6
3,199,417	-		TX73_014630	0.37	-1.1
3,199,445	+		TX73_014630	0.41	-0.2
3,199,447	-		TX73_014630	0.41	-0.0
3,199,453	-		TX73_014630	0.41	-0.5
3,199,465	-		TX73_014630	0.43	+0.6
3,199,488	+		TX73_014630	0.45	+1.7
3,199,511	-		TX73_014630	0.48	+0.2
3,199,526	+		TX73_014630	0.50	+2.2
3,199,575	-		TX73_014630	0.55	-0.0
3,199,584	+		TX73_014630	0.56	-0.9
3,199,585	+		TX73_014630	0.56	+0.1
3,199,586	+		TX73_014630	0.56	-0.0
3,199,586	+		TX73_014630	0.56	+0.2
3,199,592	-		TX73_014630	0.57	+0.8
3,199,594	-		TX73_014630	0.57	+1.7
3,199,594	-		TX73_014630	0.57	+0.2
3,199,594	-		TX73_014630	0.57	-0.0
3,199,594	-		TX73_014630	0.57	+0.1
3,199,646	+		TX73_014630	0.63	-0.3
3,199,650	-		TX73_014630	0.63	+0.2
3,199,652	-		TX73_014630	0.64	-0.7
3,199,652	-		TX73_014630	0.64	-0.0
3,199,654	-		TX73_014630	0.64	+0.2
3,199,663	+		TX73_014630	0.65	+0.3
3,199,673	+		TX73_014630	0.66	+0.2
3,199,702	+		TX73_014630	0.69	-0.2
3,199,707	+		TX73_014630	0.70	+0.4
3,199,724	+		TX73_014630	0.72	+0.6
3,199,729	-		TX73_014630	0.72	+0.6
3,199,729	-		TX73_014630	0.72	+1.1
3,199,736	+		TX73_014630	0.73	+0.2
3,199,754	+		TX73_014630	0.75	-1.0
3,199,787	-		TX73_014630	0.79	-1.1
3,199,795	+		TX73_014630	0.80	-0.0
3,199,795	+		TX73_014630	0.80	-0.3
3,199,799	-		TX73_014630	0.80	+0.3
3,199,802	+		TX73_014630	0.80	-0.1
3,199,804	+		TX73_014630	0.81	-0.1
3,199,815	+		TX73_014630	0.82	+0.9
3,199,817	+		TX73_014630	0.82	+0.4
3,199,844	+		TX73_014630	0.85	-0.1
3,199,859	+		TX73_014630	0.87	+0.9
3,199,859	+		TX73_014630	0.87	+0.0
3,199,859	+		TX73_014630	0.87	-0.6
3,199,867	-		TX73_014630	0.88	-0.1
3,199,867	-		TX73_014630	0.88	+0.3
3,199,877	-		TX73_014630	0.89	+0.6
3,199,908	-				-0.6
3,199,923	-				+0.4
3,199,950	+				-0.4
3,199,979	-				+0.6
3,199,995	+				+0.6
3,200,002	-				-0.1
3,200,003	-				-1.7
3,200,003	-				-0.5
3,200,025	-				-0.0
3,200,037	+				+0.6
3,200,071	-				+0.0
3,200,071	-				-0.6
3,200,151	-				-0.9
3,200,152	-				-1.0
3,200,172	+				-0.2
3,200,180	-				-1.3
3,200,245	-				-0.1
3,200,256	+				-0.5
3,200,256	+				-0.5
3,200,264	-				+0.1
3,200,264	-				-0.3
3,200,264	-				+0.5
3,200,269	+				+0.4
3,200,293	+				-1.4
3,200,293	+				+0.4
3,200,293	+				-0.0
3,200,301	-				-0.1
3,200,303	+				+0.2
3,200,311	-				-0.7
3,200,363	+				-0.8
3,200,382	+				+0.1
3,200,382	+				+0.6
3,200,420	-				-0.2
3,200,421	-				+0.1
3,200,469	-				+0.5
3,200,471	+				-0.1
3,200,517	-		TX73_014635	0.27	-0.3
3,200,523	+		TX73_014635	0.31	-0.0
3,200,531	+		TX73_014635	0.36	-0.2
3,200,531	+		TX73_014635	0.36	-0.1
3,200,536	+		TX73_014635	0.39	+0.4
3,200,539	-		TX73_014635	0.41	-0.2
3,200,616	+				-0.5
3,200,616	+				+0.1
3,200,624	-				-0.4
3,200,624	-				+0.0
3,200,631	-				+0.0
3,200,632	+				+0.1
3,200,635	-				-0.0
3,200,641	+				+0.1
3,200,664	+				+3.8
3,200,668	+				+0.2
3,200,671	+				-1.0
3,200,679	+				+0.3
3,200,681	+				-0.1
3,200,698	+				+0.1
3,200,698	+				+0.1
3,200,698	+				+0.0
3,200,698	+				-0.3
3,200,698	+				-0.1
3,200,698	+				-0.7
3,200,706	-				+0.7
3,200,706	-				-0.2
3,200,706	-				-1.2
3,200,706	-				-0.4
3,200,728	+				+0.1
3,200,736	-				-0.3
3,200,762	-				-0.4
3,200,762	-				+0.7
3,200,762	-				-0.1
3,200,765	+				-0.1
3,200,780	+				-0.2
3,200,788	-				+1.4
3,200,792	+				+0.3
3,200,793	-				+0.0
3,200,803	+				-0.6
3,200,865	+				+0.4
3,200,865	+				-0.4
3,200,891	+				-0.1
3,200,891	+				-0.4
3,200,898	-				-0.1
3,200,899	-				-0.0
3,200,900	+				+0.2
3,200,914	+		TX73_014640	0.10	+0.0
3,200,916	-		TX73_014640	0.11	+0.4
3,200,929	-		TX73_014640	0.11	+0.9
3,200,930	+		TX73_014640	0.11	+0.0
3,200,930	+		TX73_014640	0.11	+0.7
3,200,930	-		TX73_014640	0.11	-0.3
3,200,930	-		TX73_014640	0.11	+0.5
3,200,948	-		TX73_014640	0.13	-0.4
3,200,974	-		TX73_014640	0.15	-0.4