Experiment: Sulfoacetic sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_015770 and TX73_015775 are separated by 150 nucleotides TX73_015775 and TX73_015780 are separated by 42 nucleotides TX73_015780 and TX73_015785 are separated by 266 nucleotides
TX73_015770: TX73_015770 - RNA degradosome polyphosphate kinase, at 3,450,483 to 3,452,693
_015770
TX73_015775: TX73_015775 - DnaA/Hda family protein, at 3,452,844 to 3,453,521
_015775
TX73_015780: TX73_015780 - CDP-alcohol phosphatidyltransferase family protein, at 3,453,564 to 3,454,109
_015780
TX73_015785: TX73_015785 - phosphoribosylformylglycinamidine cyclo-ligase, at 3,454,376 to 3,455,449
_015785
Position (kb)
3453
3454
3455 Strain fitness (log2 ratio)
-2
-1
0
1 at 3452.592 kb on - strand at 3452.592 kb on - strand at 3452.681 kb on + strand at 3452.708 kb on + strand at 3452.713 kb on + strand at 3452.713 kb on + strand at 3452.721 kb on - strand at 3452.728 kb on + strand at 3452.752 kb on - strand at 3452.825 kb on - strand at 3452.827 kb on + strand at 3452.843 kb on - strand at 3452.846 kb on + strand at 3452.869 kb on - strand at 3453.515 kb on + strand at 3453.516 kb on - strand at 3453.517 kb on + strand at 3453.525 kb on - strand at 3453.525 kb on - strand at 3453.563 kb on + strand at 3453.563 kb on + strand at 3453.569 kb on + strand at 3453.571 kb on - strand at 3453.571 kb on - strand at 3453.576 kb on - strand at 3453.577 kb on - strand at 3453.583 kb on + strand at 3453.605 kb on + strand at 3453.613 kb on - strand at 3453.633 kb on + strand, within TX73_015780 at 3453.633 kb on + strand, within TX73_015780 at 3453.641 kb on - strand, within TX73_015780 at 3453.641 kb on - strand, within TX73_015780 at 3453.641 kb on - strand, within TX73_015780 at 3453.641 kb on - strand, within TX73_015780 at 3453.641 kb on - strand, within TX73_015780 at 3453.659 kb on + strand, within TX73_015780 at 3453.665 kb on + strand, within TX73_015780 at 3453.666 kb on + strand, within TX73_015780 at 3453.666 kb on + strand, within TX73_015780 at 3453.673 kb on - strand, within TX73_015780 at 3453.674 kb on - strand, within TX73_015780 at 3453.674 kb on - strand, within TX73_015780 at 3453.703 kb on + strand, within TX73_015780 at 3453.711 kb on - strand, within TX73_015780 at 3453.711 kb on - strand, within TX73_015780 at 3453.711 kb on - strand, within TX73_015780 at 3453.711 kb on - strand, within TX73_015780 at 3453.741 kb on + strand, within TX73_015780 at 3453.741 kb on + strand, within TX73_015780 at 3453.746 kb on + strand, within TX73_015780 at 3453.791 kb on + strand, within TX73_015780 at 3453.799 kb on - strand, within TX73_015780 at 3453.825 kb on - strand, within TX73_015780 at 3453.825 kb on - strand, within TX73_015780 at 3453.826 kb on - strand, within TX73_015780 at 3453.836 kb on + strand, within TX73_015780 at 3453.836 kb on + strand, within TX73_015780 at 3453.844 kb on - strand, within TX73_015780 at 3453.845 kb on + strand, within TX73_015780 at 3453.853 kb on - strand, within TX73_015780 at 3453.853 kb on - strand, within TX73_015780 at 3453.855 kb on + strand, within TX73_015780 at 3453.876 kb on + strand, within TX73_015780 at 3453.876 kb on - strand, within TX73_015780 at 3453.883 kb on - strand, within TX73_015780 at 3453.885 kb on + strand, within TX73_015780 at 3453.900 kb on + strand, within TX73_015780 at 3453.900 kb on - strand, within TX73_015780 at 3453.908 kb on - strand, within TX73_015780 at 3453.922 kb on + strand, within TX73_015780 at 3453.922 kb on + strand, within TX73_015780 at 3453.930 kb on - strand, within TX73_015780 at 3453.988 kb on + strand, within TX73_015780 at 3454.007 kb on - strand, within TX73_015780 at 3454.011 kb on - strand, within TX73_015780 at 3454.043 kb on + strand, within TX73_015780 at 3454.053 kb on + strand, within TX73_015780 at 3454.072 kb on - strand at 3454.073 kb on - strand at 3454.094 kb on + strand at 3454.115 kb on + strand at 3454.164 kb on - strand at 3454.183 kb on + strand at 3454.188 kb on + strand at 3454.191 kb on - strand at 3454.195 kb on - strand at 3454.212 kb on + strand at 3454.220 kb on - strand at 3454.224 kb on + strand at 3454.244 kb on + strand at 3454.244 kb on + strand at 3454.252 kb on - strand at 3454.282 kb on + strand at 3454.309 kb on - strand at 3454.318 kb on + strand at 3454.329 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sulfoacetic sulfur source remove 3,452,592 - -2.7 3,452,592 - -0.5 3,452,681 + -2.7 3,452,708 + -0.7 3,452,713 + -0.8 3,452,713 + -0.6 3,452,721 - -0.6 3,452,728 + +0.2 3,452,752 - +0.2 3,452,825 - -0.2 3,452,827 + -0.1 3,452,843 - -0.0 3,452,846 + -0.1 3,452,869 - -0.6 3,453,515 + +0.6 3,453,516 - -0.3 3,453,517 + -0.2 3,453,525 - -1.1 3,453,525 - +0.5 3,453,563 + +0.5 3,453,563 + +1.2 3,453,569 + +0.4 3,453,571 - -0.9 3,453,571 - -0.3 3,453,576 - +0.3 3,453,577 - +0.8 3,453,583 + -0.6 3,453,605 + +0.7 3,453,613 - +0.1 3,453,633 + TX73_015780 0.13 +1.1 3,453,633 + TX73_015780 0.13 -0.2 3,453,641 - TX73_015780 0.14 +0.8 3,453,641 - TX73_015780 0.14 +1.0 3,453,641 - TX73_015780 0.14 -0.2 3,453,641 - TX73_015780 0.14 +0.5 3,453,641 - TX73_015780 0.14 +0.1 3,453,659 + TX73_015780 0.17 -0.1 3,453,665 + TX73_015780 0.18 -0.0 3,453,666 + TX73_015780 0.19 +0.3 3,453,666 + TX73_015780 0.19 +0.4 3,453,673 - TX73_015780 0.20 +0.3 3,453,674 - TX73_015780 0.20 +0.6 3,453,674 - TX73_015780 0.20 -0.8 3,453,703 + TX73_015780 0.25 +0.8 3,453,711 - TX73_015780 0.27 -1.3 3,453,711 - TX73_015780 0.27 -0.7 3,453,711 - TX73_015780 0.27 +0.8 3,453,711 - TX73_015780 0.27 +0.3 3,453,741 + TX73_015780 0.32 +1.1 3,453,741 + TX73_015780 0.32 +0.1 3,453,746 + TX73_015780 0.33 +0.6 3,453,791 + TX73_015780 0.42 +1.0 3,453,799 - TX73_015780 0.43 -0.4 3,453,825 - TX73_015780 0.48 -1.9 3,453,825 - TX73_015780 0.48 +0.6 3,453,826 - TX73_015780 0.48 +0.5 3,453,836 + TX73_015780 0.50 +0.5 3,453,836 + TX73_015780 0.50 +0.7 3,453,844 - TX73_015780 0.51 +0.4 3,453,845 + TX73_015780 0.51 +0.6 3,453,853 - TX73_015780 0.53 -0.2 3,453,853 - TX73_015780 0.53 +0.8 3,453,855 + TX73_015780 0.53 +1.1 3,453,876 + TX73_015780 0.57 +0.5 3,453,876 - TX73_015780 0.57 +0.2 3,453,883 - TX73_015780 0.58 +0.6 3,453,885 + TX73_015780 0.59 -0.6 3,453,900 + TX73_015780 0.62 -0.7 3,453,900 - TX73_015780 0.62 +0.4 3,453,908 - TX73_015780 0.63 -0.6 3,453,922 + TX73_015780 0.66 +0.4 3,453,922 + TX73_015780 0.66 +0.7 3,453,930 - TX73_015780 0.67 +0.6 3,453,988 + TX73_015780 0.78 +0.3 3,454,007 - TX73_015780 0.81 +1.4 3,454,011 - TX73_015780 0.82 -2.0 3,454,043 + TX73_015780 0.88 -0.7 3,454,053 + TX73_015780 0.90 -0.1 3,454,072 - +0.6 3,454,073 - +1.0 3,454,094 + -0.2 3,454,115 + +0.3 3,454,164 - +0.5 3,454,183 + +0.2 3,454,188 + -0.5 3,454,191 - -0.0 3,454,195 - -0.6 3,454,212 + -0.1 3,454,220 - -0.8 3,454,224 + +0.8 3,454,244 + -0.3 3,454,244 + -0.6 3,454,252 - -1.1 3,454,282 + -0.1 3,454,309 - -0.0 3,454,318 + +0.3 3,454,329 - -0.5
Or see this region's nucleotide sequence