Experiment: Sulfoacetic sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_012475 and TX73_012480 overlap by 8 nucleotides TX73_012480 and TX73_012485 are separated by 25 nucleotides TX73_012485 and TX73_012490 are separated by 14 nucleotides
TX73_012475: TX73_012475 - ABC transporter ATP-binding protein, at 2,738,086 to 2,738,808
_012475
TX73_012480: TX73_012480 - ABC transporter ATP-binding protein, at 2,738,801 to 2,739,514
_012480
TX73_012485: TX73_012485 - acetamidase/formamidase family protein, at 2,739,540 to 2,740,529
_012485
TX73_012490: TX73_012490 - amidohydrolase, at 2,740,544 to 2,742,283
_012490
Position (kb)
2739
2740
2741 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2738.625 kb on + strand, within TX73_012475 at 2738.694 kb on + strand, within TX73_012475 at 2738.733 kb on + strand, within TX73_012475 at 2738.741 kb on - strand at 2738.780 kb on + strand at 2738.791 kb on + strand at 2738.816 kb on + strand at 2738.818 kb on + strand at 2738.818 kb on + strand at 2738.826 kb on - strand at 2738.869 kb on - strand at 2738.990 kb on - strand, within TX73_012480 at 2739.059 kb on + strand, within TX73_012480 at 2739.246 kb on + strand, within TX73_012480 at 2739.577 kb on - strand at 2739.610 kb on + strand at 2739.618 kb on - strand at 2739.637 kb on - strand at 2739.806 kb on + strand, within TX73_012485 at 2739.824 kb on + strand, within TX73_012485 at 2739.893 kb on + strand, within TX73_012485 at 2739.896 kb on - strand, within TX73_012485 at 2739.925 kb on - strand, within TX73_012485 at 2739.926 kb on + strand, within TX73_012485 at 2739.954 kb on + strand, within TX73_012485 at 2740.002 kb on + strand, within TX73_012485 at 2740.111 kb on + strand, within TX73_012485 at 2740.119 kb on - strand, within TX73_012485 at 2740.157 kb on + strand, within TX73_012485 at 2740.211 kb on - strand, within TX73_012485 at 2740.229 kb on - strand, within TX73_012485 at 2740.268 kb on - strand, within TX73_012485 at 2740.274 kb on + strand, within TX73_012485 at 2740.274 kb on + strand, within TX73_012485 at 2740.282 kb on - strand, within TX73_012485 at 2740.282 kb on - strand, within TX73_012485 at 2740.383 kb on - strand, within TX73_012485 at 2740.385 kb on + strand, within TX73_012485 at 2740.429 kb on + strand, within TX73_012485 at 2740.448 kb on + strand at 2740.480 kb on + strand at 2740.603 kb on + strand at 2740.620 kb on + strand at 2740.661 kb on - strand at 2740.701 kb on + strand at 2740.740 kb on + strand, within TX73_012490 at 2740.868 kb on - strand, within TX73_012490 at 2740.885 kb on + strand, within TX73_012490 at 2740.928 kb on - strand, within TX73_012490 at 2741.092 kb on + strand, within TX73_012490 at 2741.100 kb on - strand, within TX73_012490 at 2741.206 kb on - strand, within TX73_012490 at 2741.237 kb on + strand, within TX73_012490 at 2741.258 kb on + strand, within TX73_012490 at 2741.266 kb on - strand, within TX73_012490 at 2741.268 kb on - strand, within TX73_012490 at 2741.279 kb on + strand, within TX73_012490 at 2741.279 kb on + strand, within TX73_012490 at 2741.316 kb on + strand, within TX73_012490 at 2741.381 kb on - strand, within TX73_012490 at 2741.409 kb on - strand, within TX73_012490 at 2741.476 kb on + strand, within TX73_012490 at 2741.503 kb on + strand, within TX73_012490
Per-strain Table
Position Strand Gene LocusTag Fraction Sulfoacetic sulfur source remove 2,738,625 + TX73_012475 0.75 +0.1 2,738,694 + TX73_012475 0.84 -0.6 2,738,733 + TX73_012475 0.89 +0.4 2,738,741 - +0.3 2,738,780 + -0.2 2,738,791 + -0.7 2,738,816 + -0.0 2,738,818 + -0.1 2,738,818 + +0.9 2,738,826 - -1.3 2,738,869 - +0.7 2,738,990 - TX73_012480 0.26 +0.8 2,739,059 + TX73_012480 0.36 +0.3 2,739,246 + TX73_012480 0.62 +1.0 2,739,577 - +1.1 2,739,610 + -1.4 2,739,618 - +0.5 2,739,637 - +3.4 2,739,806 + TX73_012485 0.27 -0.1 2,739,824 + TX73_012485 0.29 -0.9 2,739,893 + TX73_012485 0.36 +0.3 2,739,896 - TX73_012485 0.36 +0.9 2,739,925 - TX73_012485 0.39 +1.0 2,739,926 + TX73_012485 0.39 -0.3 2,739,954 + TX73_012485 0.42 -0.1 2,740,002 + TX73_012485 0.47 +0.8 2,740,111 + TX73_012485 0.58 -0.9 2,740,119 - TX73_012485 0.58 -1.1 2,740,157 + TX73_012485 0.62 +0.6 2,740,211 - TX73_012485 0.68 +0.4 2,740,229 - TX73_012485 0.70 +0.3 2,740,268 - TX73_012485 0.74 +1.0 2,740,274 + TX73_012485 0.74 +0.4 2,740,274 + TX73_012485 0.74 -0.1 2,740,282 - TX73_012485 0.75 -0.6 2,740,282 - TX73_012485 0.75 +0.7 2,740,383 - TX73_012485 0.85 +1.2 2,740,385 + TX73_012485 0.85 -1.1 2,740,429 + TX73_012485 0.90 +0.7 2,740,448 + -1.0 2,740,480 + +0.5 2,740,603 + -0.3 2,740,620 + +1.4 2,740,661 - +0.1 2,740,701 + -0.6 2,740,740 + TX73_012490 0.11 -2.0 2,740,868 - TX73_012490 0.19 +0.2 2,740,885 + TX73_012490 0.20 -0.0 2,740,928 - TX73_012490 0.22 +0.1 2,741,092 + TX73_012490 0.31 -0.4 2,741,100 - TX73_012490 0.32 +0.2 2,741,206 - TX73_012490 0.38 -0.8 2,741,237 + TX73_012490 0.40 +0.1 2,741,258 + TX73_012490 0.41 -1.0 2,741,266 - TX73_012490 0.41 -0.6 2,741,268 - TX73_012490 0.42 -0.3 2,741,279 + TX73_012490 0.42 +0.2 2,741,279 + TX73_012490 0.42 -0.2 2,741,316 + TX73_012490 0.44 -0.4 2,741,381 - TX73_012490 0.48 +0.6 2,741,409 - TX73_012490 0.50 +0.5 2,741,476 + TX73_012490 0.54 -0.7 2,741,503 + TX73_012490 0.55 -0.9
Or see this region's nucleotide sequence