Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021060

Experiment: Dimethylsulfoniopropionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethylsulfoniopropionate sulfur source
4,601,893	-		TX73_021055	0.78	+0.2
4,601,921	-		TX73_021055	0.79	+0.9
4,601,928	+		TX73_021055	0.79	+1.5
4,601,954	-		TX73_021055	0.80	+0.2
4,602,036	+		TX73_021055	0.83	+0.1
4,602,086	-		TX73_021055	0.85	+0.3
4,602,216	-		TX73_021055	0.90	+0.3
4,602,306	+				+0.0
4,602,324	-				-0.8
4,602,384	+				-1.5
4,602,434	-				-1.6
4,602,476	-				+0.4
4,602,491	+				+0.0
4,602,499	-				+1.2
4,602,499	-				+0.8
4,602,499	-				-1.4
4,602,537	+				+0.3
4,602,545	-				+0.4
4,602,547	+				+0.1
4,602,613	+				-1.4
4,602,644	+				-1.0
4,602,644	+				-0.4
4,602,644	+				-0.7
4,602,652	-				-0.6
4,602,652	-				-2.1
4,602,652	-				-0.5
4,602,657	+				+1.4
4,602,657	+				+0.2
4,602,657	+				-0.8
4,602,657	+				-1.3
4,602,657	+				-0.4
4,602,665	-				-0.2
4,602,732	+				+0.7
4,602,802	+				+0.2
4,602,810	-				-0.9
4,602,814	+				-1.1
4,602,824	-				-3.1
4,602,841	-				-0.8
4,602,919	+				+0.4
4,602,922	-				+0.3
4,602,962	-				+0.5
4,602,965	+				+0.7
4,603,006	-				+0.6
4,603,011	-				+0.7
4,603,030	+				+0.4
4,603,030	+				+1.1
4,603,038	-				+1.6
4,603,038	-				-0.9
4,603,082	+				-1.3
4,603,151	-		TX73_021060	0.11	+0.5
4,603,156	-		TX73_021060	0.12	+2.1
4,603,226	+		TX73_021060	0.14	+0.3
4,603,265	+		TX73_021060	0.16	-0.4
4,603,266	+		TX73_021060	0.16	+0.2
4,603,266	+		TX73_021060	0.16	+1.2
4,603,272	+		TX73_021060	0.16	+0.9
4,603,273	-		TX73_021060	0.16	+0.2
4,603,273	-		TX73_021060	0.16	-0.4
4,603,273	-		TX73_021060	0.16	+1.4
4,603,319	-		TX73_021060	0.18	+0.5
4,603,331	+		TX73_021060	0.18	+0.5
4,603,364	+		TX73_021060	0.20	+1.3
4,603,374	-		TX73_021060	0.20	-0.0
4,603,501	+		TX73_021060	0.25	+0.8
4,603,509	-		TX73_021060	0.25	-0.4
4,603,597	-		TX73_021060	0.29	+1.2
4,603,639	+		TX73_021060	0.30	+0.7
4,603,771	+		TX73_021060	0.35	-0.3
4,603,787	+		TX73_021060	0.36	+0.0
4,603,787	+		TX73_021060	0.36	+0.2
4,603,795	-		TX73_021060	0.36	+0.4
4,603,999	-		TX73_021060	0.44	+0.5
4,604,006	+		TX73_021060	0.44	+0.0
4,604,006	+		TX73_021060	0.44	-0.2
4,604,071	+		TX73_021060	0.47	-1.4
4,604,079	-		TX73_021060	0.47	+0.7
4,604,086	+		TX73_021060	0.47	-0.4
4,604,086	+		TX73_021060	0.47	-2.1
4,604,086	+		TX73_021060	0.47	+0.0
4,604,094	+		TX73_021060	0.48	+0.6
4,604,094	-		TX73_021060	0.48	+1.1
4,604,148	+		TX73_021060	0.50	+0.7
4,604,289	-		TX73_021060	0.55	+0.1
4,604,322	+		TX73_021060	0.56	+0.4
4,604,369	-		TX73_021060	0.58	+0.1
4,604,369	-		TX73_021060	0.58	-1.0
4,604,381	-		TX73_021060	0.59	+0.8
4,604,402	-		TX73_021060	0.59	+1.8
4,604,405	-		TX73_021060	0.59	+0.6
4,604,466	-		TX73_021060	0.62	+0.6
4,604,466	-		TX73_021060	0.62	-0.0
4,604,501	-		TX73_021060	0.63	+0.5
4,604,523	-		TX73_021060	0.64	+0.8
4,604,556	-		TX73_021060	0.65	+1.0
4,604,570	-		TX73_021060	0.66	+0.6
4,604,575	-		TX73_021060	0.66	+1.7
4,604,615	-		TX73_021060	0.68	+0.3
4,604,628	+		TX73_021060	0.68	+0.7
4,604,741	+		TX73_021060	0.72	-0.2
4,604,749	-		TX73_021060	0.73	+1.3
4,604,823	+		TX73_021060	0.75	+0.2
4,604,824	+		TX73_021060	0.76	+0.6
4,604,831	-		TX73_021060	0.76	-1.2
4,604,837	-		TX73_021060	0.76	+0.1
4,604,842	-		TX73_021060	0.76	+0.5
4,604,881	-		TX73_021060	0.78	-0.5
4,604,973	+		TX73_021060	0.81	+1.3
4,604,997	-		TX73_021060	0.82	+0.5
4,605,022	-		TX73_021060	0.83	+0.1
4,605,109	-		TX73_021060	0.86	-0.8
4,605,141	+		TX73_021060	0.88	+1.2
4,605,156	+		TX73_021060	0.88	-0.3
4,605,161	+		TX73_021060	0.88	+0.6
4,605,163	+		TX73_021060	0.88	+0.3
4,605,195	+		TX73_021060	0.90	-2.5
4,605,218	-				-0.2
4,605,231	-				+0.4
4,605,419	+				+0.0
4,605,465	-				-0.7
4,605,465	-				-0.1
4,605,465	-				-0.9
4,605,465	-				+1.0
4,605,473	-				+0.6
4,605,473	-				+0.8
4,605,489	+				-0.1
4,605,489	-				+0.8
4,605,494	-				-0.8
4,605,497	-				+0.2
4,605,507	-				+0.4
4,605,603	+				+1.0
4,605,611	-				+0.9
4,605,611	-				-0.5
4,605,622	+				-2.3
4,605,629	-				-1.4
4,605,637	-				-0.2
4,605,689	+				-0.5
4,605,761	+				-0.1
4,605,761	+				+0.2
4,605,761	+				+0.5
4,605,769	-				-0.5
4,605,771	-				-0.2
4,605,774	-				-0.0
4,605,779	-				-0.3
4,605,830	-				-0.1
4,605,854	-				+0.7
4,605,985	+				+1.1
4,605,985	+				-1.0
4,605,992	+				-0.4
4,605,992	+				+0.8
4,605,993	-				+0.1
4,606,034	+				+0.5
4,606,035	+				-1.4
4,606,042	-				+0.1
4,606,043	+				+0.1
4,606,051	-				+0.6
4,606,056	+				-1.7
4,606,084	-				+0.1
4,606,085	-				+0.1
4,606,105	-				-0.3
4,606,137	+				+0.1
4,606,140	-				+0.0
4,606,143	+				-0.0
4,606,143	+				-0.4
4,606,143	+				-0.1
4,606,153	-				-0.2
4,606,155	+				-0.5
4,606,155	+				+1.2
4,606,163	+				+0.3
4,606,163	+				+0.0
4,606,168	-				-0.3
4,606,171	-				-0.1
4,606,203	-		TX73_021065	0.17	-0.1
4,606,203	-		TX73_021065	0.17	-0.5
4,606,213	-		TX73_021065	0.20	-0.2
4,606,214	+		TX73_021065	0.20	+0.0
4,606,222	-		TX73_021065	0.23	+0.3
4,606,236	+		TX73_021065	0.27	+0.8
4,606,252	+		TX73_021065	0.32	-1.1
4,606,252	+		TX73_021065	0.32	-0.0
4,606,259	+		TX73_021065	0.34	+0.7
4,606,308	-		TX73_021065	0.49	-1.8
4,606,313	+		TX73_021065	0.51	-0.5
4,606,320	+		TX73_021065	0.53	-1.0
4,606,328	-		TX73_021065	0.56	+0.5
4,606,328	-		TX73_021065	0.56	+0.0
4,606,333	+		TX73_021065	0.57	+0.3
4,606,340	+		TX73_021065	0.59	+0.5
4,606,365	+		TX73_021065	0.67	-0.3
4,606,370	+		TX73_021065	0.69	-0.3
4,606,370	+		TX73_021065	0.69	-0.1
4,606,370	+		TX73_021065	0.69	+0.8
4,606,378	-		TX73_021065	0.71	-1.1
4,606,378	-		TX73_021065	0.71	-0.0
4,606,413	-		TX73_021065	0.82	-0.1
4,606,413	-		TX73_021065	0.82	-0.2
4,606,414	-		TX73_021065	0.82	+0.2
4,606,441	-				-1.4
4,606,448	+				+0.5
4,606,448	+				+0.0
4,606,453	-				+0.5
4,606,455	+				-1.1
4,606,455	+				-1.1
4,606,455	+				+0.1
4,606,455	+				-0.2
4,606,455	+				-0.9
4,606,455	+				-0.6
4,606,463	-				-0.7
4,606,463	-				+0.2
4,606,463	-				-0.4
4,606,463	-				+0.1