Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014850

Experiment: Dimethylsulfoniopropionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethylsulfoniopropionate sulfur source
3,241,965	+		TX73_014840	0.51	-0.6
3,241,971	-		TX73_014840	0.51	-0.5
3,241,973	+		TX73_014840	0.51	+0.0
3,241,973	-		TX73_014840	0.51	+0.7
3,241,973	-		TX73_014840	0.51	+0.9
3,241,980	+		TX73_014840	0.52	+0.9
3,241,985	+		TX73_014840	0.52	+0.2
3,241,993	-		TX73_014840	0.53	+1.6
3,242,016	+		TX73_014840	0.54	-0.5
3,242,016	+		TX73_014840	0.54	-1.3
3,242,017	-		TX73_014840	0.54	+0.6
3,242,040	+		TX73_014840	0.56	-1.2
3,242,040	+		TX73_014840	0.56	-0.6
3,242,040	+		TX73_014840	0.56	+0.6
3,242,042	+		TX73_014840	0.56	-2.0
3,242,050	-		TX73_014840	0.57	+0.4
3,242,052	+		TX73_014840	0.57	+0.0
3,242,058	+		TX73_014840	0.57	+0.5
3,242,068	+		TX73_014840	0.58	-1.4
3,242,076	-		TX73_014840	0.59	+0.2
3,242,106	+		TX73_014840	0.61	-0.1
3,242,139	+		TX73_014840	0.63	+0.3
3,242,193	+		TX73_014840	0.67	-0.5
3,242,200	-		TX73_014840	0.68	+0.9
3,242,209	-		TX73_014840	0.68	+0.1
3,242,209	-		TX73_014840	0.68	-1.0
3,242,210	-		TX73_014840	0.68	+0.1
3,242,221	+		TX73_014840	0.69	-0.2
3,242,231	+		TX73_014840	0.70	-0.2
3,242,240	+		TX73_014840	0.70	-0.3
3,242,243	-		TX73_014840	0.71	-0.5
3,242,243	-		TX73_014840	0.71	-0.7
3,242,245	-		TX73_014840	0.71	+1.0
3,242,247	+		TX73_014840	0.71	+0.1
3,242,247	+		TX73_014840	0.71	+0.4
3,242,248	-		TX73_014840	0.71	+0.1
3,242,280	+		TX73_014840	0.73	-0.1
3,242,280	+		TX73_014840	0.73	-0.5
3,242,280	+		TX73_014840	0.73	-0.3
3,242,280	+		TX73_014840	0.73	-0.3
3,242,280	+		TX73_014840	0.73	-2.0
3,242,288	-		TX73_014840	0.74	-0.1
3,242,288	-		TX73_014840	0.74	+0.0
3,242,288	-		TX73_014840	0.74	-0.1
3,242,288	-		TX73_014840	0.74	-0.5
3,242,288	-		TX73_014840	0.74	+0.3
3,242,292	-		TX73_014840	0.74	-0.6
3,242,293	-		TX73_014840	0.74	-1.2
3,242,330	+		TX73_014840	0.77	-0.6
3,242,333	-		TX73_014840	0.77	-0.2
3,242,333	-		TX73_014840	0.77	+1.1
3,242,334	-		TX73_014840	0.77	+0.5
3,242,340	+		TX73_014840	0.78	+0.8
3,242,342	+		TX73_014840	0.78	-0.3
3,242,342	+		TX73_014840	0.78	+0.2
3,242,342	+		TX73_014840	0.78	-0.1
3,242,342	+		TX73_014840	0.78	-1.5
3,242,342	+		TX73_014840	0.78	+0.5
3,242,342	+		TX73_014840	0.78	+0.1
3,242,342	+		TX73_014840	0.78	+0.2
3,242,350	-		TX73_014840	0.78	+0.6
3,242,350	-		TX73_014840	0.78	+1.1
3,242,350	-		TX73_014840	0.78	+0.8
3,242,350	-		TX73_014840	0.78	+0.9
3,242,350	-		TX73_014840	0.78	-0.8
3,242,350	-		TX73_014840	0.78	+0.9
3,242,361	-		TX73_014840	0.79	+0.6
3,242,394	+		TX73_014840	0.82	+0.8
3,242,394	+		TX73_014840	0.82	-1.0
3,242,402	-		TX73_014840	0.82	+0.1
3,242,411	-		TX73_014840	0.83	+0.5
3,242,432	+		TX73_014840	0.84	+0.6
3,242,473	-		TX73_014840	0.87	-0.4
3,242,475	+		TX73_014840	0.87	+0.1
3,242,556	+				-0.6
3,242,564	-				-1.1
3,242,564	-				-0.3
3,242,564	-				-0.1
3,242,564	-				+0.1
3,242,605	+				+0.7
3,242,613	+				-1.3
3,242,621	-				+0.0
3,242,653	+				-0.1
3,242,656	-				-0.3
3,242,658	+				+0.2
3,242,660	+				+0.3
3,242,660	+				+0.2
3,242,661	-				-0.8
3,242,668	-				-0.1
3,242,723	-		TX73_014845	0.20	+0.0
3,242,776	-		TX73_014845	0.38	+1.4
3,242,800	-		TX73_014845	0.46	+0.3
3,242,849	+		TX73_014845	0.63	-1.4
3,242,861	+		TX73_014845	0.67	-0.3
3,242,878	+		TX73_014845	0.72	-0.1
3,242,894	+		TX73_014845	0.78	-0.6
3,242,916	-		TX73_014845	0.85	-1.0
3,242,925	-		TX73_014845	0.88	+0.3
3,242,941	+				+0.7
3,242,955	+				+0.2
3,242,955	+				-0.1
3,242,962	-				+0.7
3,242,974	-				-0.5
3,242,989	+				+0.1
3,242,989	+				+0.3
3,242,989	+				+0.6
3,242,989	+				+0.3
3,242,997	-				-0.1
3,243,007	+				-0.1
3,243,007	+				-0.2
3,243,007	+				+0.1
3,243,015	-				-0.1
3,243,025	-				-2.0
3,243,037	+				-0.6
3,243,065	-				+0.7
3,243,120	+		TX73_014850	0.11	-0.2
3,243,147	-		TX73_014850	0.13	-0.7
3,243,157	-		TX73_014850	0.14	-0.7
3,243,209	+		TX73_014850	0.17	+1.1
3,243,212	-		TX73_014850	0.18	+1.6
3,243,214	+		TX73_014850	0.18	+0.6
3,243,229	+		TX73_014850	0.19	-0.4
3,243,259	+		TX73_014850	0.21	+0.4
3,243,267	-		TX73_014850	0.21	-0.2
3,243,316	+		TX73_014850	0.25	-0.2
3,243,325	+		TX73_014850	0.26	+0.5
3,243,328	-		TX73_014850	0.26	-0.9
3,243,333	+		TX73_014850	0.26	+0.3
3,243,359	-		TX73_014850	0.28	-0.7
3,243,371	+		TX73_014850	0.29	-1.9
3,243,466	+		TX73_014850	0.36	+0.2
3,243,466	+		TX73_014850	0.36	-1.0
3,243,466	+		TX73_014850	0.36	+0.5
3,243,466	+		TX73_014850	0.36	-1.4
3,243,474	-		TX73_014850	0.36	+0.4
3,243,474	-		TX73_014850	0.36	-0.2
3,243,474	-		TX73_014850	0.36	+0.8
3,243,474	-		TX73_014850	0.36	-0.1
3,243,476	+		TX73_014850	0.36	+0.7
3,243,493	+		TX73_014850	0.38	-1.7
3,243,518	+		TX73_014850	0.39	+0.1
3,243,518	+		TX73_014850	0.39	+1.6
3,243,519	-		TX73_014850	0.39	+0.1
3,243,520	-		TX73_014850	0.39	-0.5
3,243,525	+		TX73_014850	0.40	-0.5
3,243,528	-		TX73_014850	0.40	-0.3
3,243,528	-		TX73_014850	0.40	-0.4
3,243,553	+		TX73_014850	0.42	-1.0
3,243,561	-		TX73_014850	0.42	+1.1
3,243,561	-		TX73_014850	0.42	+1.0
3,243,561	-		TX73_014850	0.42	+0.4
3,243,600	+		TX73_014850	0.45	-0.1
3,243,603	-		TX73_014850	0.45	-0.4
3,243,631	+		TX73_014850	0.47	-0.1
3,243,639	-		TX73_014850	0.48	+0.4
3,243,657	+		TX73_014850	0.49	+0.5
3,243,816	+		TX73_014850	0.60	-0.5
3,243,823	-		TX73_014850	0.61	-0.5
3,243,846	-		TX73_014850	0.63	-0.3
3,243,846	-		TX73_014850	0.63	-1.2
3,243,846	-		TX73_014850	0.63	-0.7
3,243,855	+		TX73_014850	0.63	+0.6
3,243,873	-		TX73_014850	0.64	-1.3
3,243,881	-		TX73_014850	0.65	+0.8
3,243,903	-		TX73_014850	0.67	+0.0
3,243,920	-		TX73_014850	0.68	-1.5
3,243,947	-		TX73_014850	0.70	-2.4
3,243,952	-		TX73_014850	0.70	+0.1
3,243,952	-		TX73_014850	0.70	-0.2
3,243,995	+		TX73_014850	0.73	+0.1
3,244,021	+		TX73_014850	0.75	+0.3
3,244,042	+		TX73_014850	0.76	+0.8
3,244,042	+		TX73_014850	0.76	-0.6
3,244,042	+		TX73_014850	0.76	+0.8
3,244,042	+		TX73_014850	0.76	-1.6
3,244,042	+		TX73_014850	0.76	+0.3
3,244,042	+		TX73_014850	0.76	+0.5
3,244,042	+		TX73_014850	0.76	+1.4
3,244,042	+		TX73_014850	0.76	+0.5
3,244,050	-		TX73_014850	0.77	-0.6
3,244,050	-		TX73_014850	0.77	-0.2
3,244,050	-		TX73_014850	0.77	+0.8
3,244,050	-		TX73_014850	0.77	+0.2
3,244,050	-		TX73_014850	0.77	+0.6
3,244,050	-		TX73_014850	0.77	-0.6
3,244,052	+		TX73_014850	0.77	+0.9
3,244,052	-		TX73_014850	0.77	-0.0
3,244,060	-		TX73_014850	0.78	+0.4
3,244,062	-		TX73_014850	0.78	+0.2
3,244,067	-		TX73_014850	0.78	+0.3
3,244,078	+		TX73_014850	0.79	-0.5
3,244,078	+		TX73_014850	0.79	+1.3
3,244,078	+		TX73_014850	0.79	+1.3
3,244,078	+		TX73_014850	0.79	+0.7
3,244,078	+		TX73_014850	0.79	-1.2
3,244,078	+		TX73_014850	0.79	-0.9
3,244,078	+		TX73_014850	0.79	+0.1
3,244,078	+		TX73_014850	0.79	+1.5
3,244,086	-		TX73_014850	0.80	-2.1
3,244,086	-		TX73_014850	0.80	-1.5
3,244,086	-		TX73_014850	0.80	+0.0
3,244,086	-		TX73_014850	0.80	-0.8
3,244,090	-		TX73_014850	0.80	-0.2
3,244,142	+		TX73_014850	0.84	+0.3
3,244,145	-		TX73_014850	0.84	-0.2
3,244,156	+		TX73_014850	0.85	-0.7
3,244,161	+		TX73_014850	0.85	+0.1
3,244,208	+		TX73_014850	0.88	+1.3
3,244,279	-				+0.3
3,244,286	-				+0.6
3,244,326	-				-0.5
3,244,336	+				-0.2
3,244,394	-				-0.8
3,244,398	+				+0.0
3,244,406	-				+0.4
3,244,406	-				+0.1
3,244,406	-				+0.6
3,244,440	+				-0.3
3,244,443	-				+0.3
3,244,448	+				+0.2
3,244,480	+				-0.1
3,244,483	-				+0.1
3,244,544	-		TX73_014855	0.11	-0.1
3,244,558	+		TX73_014855	0.12	+0.5
3,244,570	-		TX73_014855	0.13	+0.8
3,244,575	-		TX73_014855	0.14	+0.5
3,244,584	-		TX73_014855	0.15	+1.8
3,244,592	+		TX73_014855	0.15	+0.4
3,244,600	-		TX73_014855	0.16	+0.5
3,244,623	-		TX73_014855	0.18	+0.4
3,244,657	+		TX73_014855	0.22	-0.3
3,244,682	-		TX73_014855	0.24	-0.1
3,244,689	-		TX73_014855	0.25	-0.7
3,244,689	-		TX73_014855	0.25	-0.4
3,244,764	+		TX73_014855	0.32	+0.1
3,244,772	-		TX73_014855	0.33	+0.1
3,244,772	-		TX73_014855	0.33	+0.6
3,244,772	-		TX73_014855	0.33	-1.7
3,244,772	-		TX73_014855	0.33	+0.0
3,244,772	-		TX73_014855	0.33	-1.5
3,244,772	-		TX73_014855	0.33	-0.0
3,244,825	+		TX73_014855	0.38	-0.5
3,244,833	-		TX73_014855	0.39	+0.2
3,244,850	+		TX73_014855	0.40	-0.2
3,244,881	-		TX73_014855	0.43	+1.3
3,244,898	-		TX73_014855	0.45	+1.1
3,244,916	-		TX73_014855	0.47	-1.5
3,244,916	-		TX73_014855	0.47	+2.9
3,244,916	-		TX73_014855	0.47	-0.7
3,244,926	-		TX73_014855	0.48	-2.2
3,244,927	+		TX73_014855	0.48	-0.3
3,244,927	+		TX73_014855	0.48	+0.1
3,244,927	+		TX73_014855	0.48	+0.5
3,244,927	+		TX73_014855	0.48	-0.1
3,244,934	+		TX73_014855	0.49	-0.3
3,244,934	+		TX73_014855	0.49	+0.7
3,244,934	+		TX73_014855	0.49	-0.2
3,244,935	-		TX73_014855	0.49	+0.3
3,244,935	-		TX73_014855	0.49	+0.5
3,244,935	-		TX73_014855	0.49	+1.1
3,244,935	-		TX73_014855	0.49	+0.1
3,244,935	-		TX73_014855	0.49	+0.3
3,244,935	-		TX73_014855	0.49	-2.0
3,244,952	-		TX73_014855	0.50	-0.2
3,244,968	+		TX73_014855	0.52	+0.2
3,245,026	+		TX73_014855	0.57	+0.5
3,245,086	+		TX73_014855	0.63	-0.2
3,245,088	+		TX73_014855	0.63	+0.3
3,245,094	-		TX73_014855	0.64	-2.0
3,245,096	+		TX73_014855	0.64	+2.3
3,245,101	+		TX73_014855	0.65	+1.0
3,245,102	+		TX73_014855	0.65	-0.6
3,245,102	+		TX73_014855	0.65	-0.1
3,245,108	+		TX73_014855	0.65	+0.4
3,245,110	-		TX73_014855	0.66	-0.2
3,245,132	+		TX73_014855	0.68	-0.2
3,245,140	-		TX73_014855	0.68	+0.8
3,245,168	-		TX73_014855	0.71	+0.6
3,245,168	-		TX73_014855	0.71	-0.9
3,245,168	-		TX73_014855	0.71	-0.9
3,245,198	-		TX73_014855	0.74	+0.1
3,245,212	-		TX73_014855	0.75	+0.8
3,245,219	+		TX73_014855	0.76	+0.3
3,245,219	+		TX73_014855	0.76	+0.2
3,245,222	-		TX73_014855	0.76	-0.2
3,245,227	-		TX73_014855	0.77	-0.9
3,245,227	-		TX73_014855	0.77	+0.4
3,245,227	-		TX73_014855	0.77	+0.3
3,245,244	-		TX73_014855	0.78	-0.6
3,245,267	+		TX73_014855	0.81	+0.8
3,245,267	+		TX73_014855	0.81	+0.3
3,245,267	+		TX73_014855	0.81	+0.8
3,245,267	+		TX73_014855	0.81	-1.0
3,245,274	-		TX73_014855	0.81	+0.0
3,245,275	-		TX73_014855	0.81	-0.4
3,245,275	-		TX73_014855	0.81	+1.0
3,245,275	-		TX73_014855	0.81	+0.1
3,245,295	+		TX73_014855	0.83	+0.9
3,245,303	+		TX73_014855	0.84	-0.5
3,245,303	+		TX73_014855	0.84	-0.1
3,245,303	+		TX73_014855	0.84	+0.1
3,245,303	+		TX73_014855	0.84	-0.2
3,245,303	+		TX73_014855	0.84	-0.6
3,245,303	+		TX73_014855	0.84	-0.7
3,245,303	+		TX73_014855	0.84	+1.1
3,245,308	-		TX73_014855	0.85	+0.9
3,245,311	-		TX73_014855	0.85	+0.5
3,245,311	-		TX73_014855	0.85	-0.3
3,245,311	-		TX73_014855	0.85	-0.3
3,245,311	-		TX73_014855	0.85	-1.5
3,245,311	-		TX73_014855	0.85	+0.7
3,245,311	-		TX73_014855	0.85	-0.3
3,245,311	-		TX73_014855	0.85	-1.0
3,245,368	+				+0.5