Experiment: Dimethylsulfoniopropionate sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_013575 and TX73_013580 overlap by 1 nucleotides TX73_013580 and TX73_013585 are separated by 123 nucleotides TX73_013585 and TX73_013590 are separated by 552 nucleotides
TX73_013575: TX73_013575 - ABC transporter ATP-binding protein, at 2,981,511 to 2,982,290
_013575
TX73_013580: TX73_013580 - ABC transporter permease, at 2,982,290 to 2,983,132
_013580
TX73_013585: TX73_013585 - aliphatic sulfonate ABC transporter substrate-binding protein, at 2,983,256 to 2,984,230
_013585
TX73_013590: TX73_013590 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 2,984,783 to 2,985,991
_013590
Position (kb)
2983
2984
2985 Strain fitness (log2 ratio)
-1
0
1
2 at 2982.269 kb on - strand at 2982.332 kb on + strand at 2982.338 kb on + strand at 2982.340 kb on - strand at 2982.375 kb on - strand, within TX73_013580 at 2982.410 kb on + strand, within TX73_013580 at 2982.430 kb on + strand, within TX73_013580 at 2982.448 kb on + strand, within TX73_013580 at 2982.471 kb on - strand, within TX73_013580 at 2982.482 kb on - strand, within TX73_013580 at 2982.500 kb on + strand, within TX73_013580 at 2982.514 kb on - strand, within TX73_013580 at 2982.517 kb on + strand, within TX73_013580 at 2982.588 kb on - strand, within TX73_013580 at 2982.612 kb on + strand, within TX73_013580 at 2982.629 kb on - strand, within TX73_013580 at 2982.667 kb on - strand, within TX73_013580 at 2982.700 kb on + strand, within TX73_013580 at 2982.716 kb on - strand, within TX73_013580 at 2982.755 kb on + strand, within TX73_013580 at 2982.783 kb on + strand, within TX73_013580 at 2982.836 kb on - strand, within TX73_013580 at 2982.840 kb on + strand, within TX73_013580 at 2982.840 kb on + strand, within TX73_013580 at 2982.840 kb on + strand, within TX73_013580 at 2982.848 kb on - strand, within TX73_013580 at 2982.961 kb on - strand, within TX73_013580 at 2983.034 kb on + strand, within TX73_013580 at 2983.081 kb on - strand at 2983.081 kb on - strand at 2983.081 kb on - strand at 2983.113 kb on - strand at 2983.132 kb on + strand at 2983.173 kb on + strand at 2983.240 kb on - strand at 2983.268 kb on - strand at 2983.381 kb on + strand, within TX73_013585 at 2983.428 kb on - strand, within TX73_013585 at 2983.477 kb on + strand, within TX73_013585 at 2983.596 kb on - strand, within TX73_013585 at 2983.606 kb on - strand, within TX73_013585 at 2983.635 kb on - strand, within TX73_013585 at 2983.674 kb on - strand, within TX73_013585 at 2983.738 kb on - strand, within TX73_013585 at 2983.762 kb on + strand, within TX73_013585 at 2983.775 kb on - strand, within TX73_013585 at 2983.908 kb on + strand, within TX73_013585 at 2983.940 kb on - strand, within TX73_013585 at 2984.042 kb on - strand, within TX73_013585 at 2984.083 kb on - strand, within TX73_013585 at 2984.109 kb on + strand, within TX73_013585 at 2984.220 kb on - strand at 2984.224 kb on - strand at 2984.424 kb on + strand at 2984.432 kb on - strand at 2984.450 kb on + strand at 2984.473 kb on - strand at 2984.481 kb on - strand at 2984.506 kb on + strand at 2984.507 kb on + strand at 2984.507 kb on + strand at 2984.507 kb on + strand at 2984.507 kb on + strand at 2984.507 kb on + strand at 2984.507 kb on + strand at 2984.510 kb on - strand at 2984.510 kb on - strand at 2984.515 kb on - strand at 2984.515 kb on - strand at 2984.515 kb on - strand at 2984.515 kb on - strand at 2984.515 kb on - strand at 2984.515 kb on - strand at 2984.515 kb on - strand at 2984.565 kb on - strand at 2984.635 kb on + strand at 2984.654 kb on + strand at 2984.717 kb on + strand at 2984.730 kb on + strand at 2984.746 kb on - strand at 2984.750 kb on + strand at 2984.750 kb on + strand at 2984.870 kb on + strand at 2984.909 kb on - strand, within TX73_013590 at 2984.937 kb on + strand, within TX73_013590 at 2984.945 kb on - strand, within TX73_013590 at 2985.014 kb on + strand, within TX73_013590 at 2985.040 kb on - strand, within TX73_013590 at 2985.048 kb on - strand, within TX73_013590 at 2985.137 kb on - strand, within TX73_013590 at 2985.143 kb on - strand, within TX73_013590 at 2985.166 kb on - strand, within TX73_013590 at 2985.177 kb on - strand, within TX73_013590 at 2985.193 kb on - strand, within TX73_013590 at 2985.210 kb on + strand, within TX73_013590 at 2985.227 kb on + strand, within TX73_013590
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethylsulfoniopropionate sulfur source remove 2,982,269 - -0.0 2,982,332 + -1.5 2,982,338 + -0.1 2,982,340 - +0.0 2,982,375 - TX73_013580 0.10 +0.9 2,982,410 + TX73_013580 0.14 -0.1 2,982,430 + TX73_013580 0.17 -0.2 2,982,448 + TX73_013580 0.19 -0.3 2,982,471 - TX73_013580 0.21 -0.2 2,982,482 - TX73_013580 0.23 +0.3 2,982,500 + TX73_013580 0.25 +0.8 2,982,514 - TX73_013580 0.27 -0.2 2,982,517 + TX73_013580 0.27 +0.4 2,982,588 - TX73_013580 0.35 +1.3 2,982,612 + TX73_013580 0.38 +0.1 2,982,629 - TX73_013580 0.40 -0.5 2,982,667 - TX73_013580 0.45 +0.6 2,982,700 + TX73_013580 0.49 +0.1 2,982,716 - TX73_013580 0.51 +1.1 2,982,755 + TX73_013580 0.55 -1.3 2,982,783 + TX73_013580 0.58 +0.2 2,982,836 - TX73_013580 0.65 -0.2 2,982,840 + TX73_013580 0.65 +0.1 2,982,840 + TX73_013580 0.65 +0.7 2,982,840 + TX73_013580 0.65 +0.9 2,982,848 - TX73_013580 0.66 +0.1 2,982,961 - TX73_013580 0.80 +0.8 2,983,034 + TX73_013580 0.88 +0.0 2,983,081 - -0.5 2,983,081 - +1.9 2,983,081 - +0.8 2,983,113 - +0.4 2,983,132 + -0.1 2,983,173 + -0.2 2,983,240 - -0.4 2,983,268 - -0.5 2,983,381 + TX73_013585 0.13 +1.4 2,983,428 - TX73_013585 0.18 +0.6 2,983,477 + TX73_013585 0.23 -0.5 2,983,596 - TX73_013585 0.35 -1.2 2,983,606 - TX73_013585 0.36 +0.3 2,983,635 - TX73_013585 0.39 -0.6 2,983,674 - TX73_013585 0.43 +1.1 2,983,738 - TX73_013585 0.49 -0.2 2,983,762 + TX73_013585 0.52 +0.2 2,983,775 - TX73_013585 0.53 -0.2 2,983,908 + TX73_013585 0.67 -0.5 2,983,940 - TX73_013585 0.70 -0.1 2,984,042 - TX73_013585 0.81 +0.7 2,984,083 - TX73_013585 0.85 +0.2 2,984,109 + TX73_013585 0.87 +0.3 2,984,220 - -0.3 2,984,224 - +0.3 2,984,424 + +0.2 2,984,432 - -0.1 2,984,450 + -0.3 2,984,473 - +0.3 2,984,481 - +0.8 2,984,506 + -0.1 2,984,507 + -0.7 2,984,507 + -0.0 2,984,507 + -1.3 2,984,507 + -0.9 2,984,507 + +1.1 2,984,507 + +0.3 2,984,510 - +0.1 2,984,510 - +0.4 2,984,515 - +0.7 2,984,515 - -0.9 2,984,515 - +0.3 2,984,515 - -0.1 2,984,515 - -0.5 2,984,515 - +0.7 2,984,515 - -0.7 2,984,565 - +0.1 2,984,635 + +0.3 2,984,654 + -0.9 2,984,717 + -0.9 2,984,730 + +0.2 2,984,746 - +0.4 2,984,750 + -0.2 2,984,750 + +0.4 2,984,870 + -0.9 2,984,909 - TX73_013590 0.10 -0.1 2,984,937 + TX73_013590 0.13 +0.8 2,984,945 - TX73_013590 0.13 +0.3 2,985,014 + TX73_013590 0.19 -0.0 2,985,040 - TX73_013590 0.21 -0.2 2,985,048 - TX73_013590 0.22 +0.1 2,985,137 - TX73_013590 0.29 +0.1 2,985,143 - TX73_013590 0.30 +1.0 2,985,166 - TX73_013590 0.32 -0.2 2,985,177 - TX73_013590 0.33 +0.2 2,985,193 - TX73_013590 0.34 -0.5 2,985,210 + TX73_013590 0.35 +0.4 2,985,227 + TX73_013590 0.37 -0.4
Or see this region's nucleotide sequence