Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_009330

Experiment: Dimethylsulfoniopropionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethylsulfoniopropionate sulfur source
2,039,513	-		TX73_009320	0.74	-0.7
2,039,515	+		TX73_009320	0.74	+0.3
2,039,515	+		TX73_009320	0.74	-0.6
2,039,520	+		TX73_009320	0.75	+1.6
2,039,523	-		TX73_009320	0.75	-0.1
2,039,523	-		TX73_009320	0.75	+0.1
2,039,528	-		TX73_009320	0.76	-0.2
2,039,528	-		TX73_009320	0.76	-0.3
2,039,528	-		TX73_009320	0.76	+1.2
2,039,543	-		TX73_009320	0.78	-0.4
2,039,543	-		TX73_009320	0.78	-1.0
2,039,608	-		TX73_009320	0.86	-2.3
2,039,661	-				-0.5
2,039,661	-				+0.1
2,039,662	-				-0.4
2,039,667	+				+1.3
2,039,672	+				-0.1
2,039,672	+				+0.1
2,039,675	-				-0.3
2,039,679	+				-0.1
2,039,680	-				-0.5
2,039,680	-				-0.0
2,039,680	-				-0.4
2,039,694	+				-0.7
2,039,757	+				-0.6
2,039,803	+				-0.2
2,039,803	+				+0.2
2,039,803	+				-0.9
2,039,803	+				-0.8
2,039,803	+				+0.0
2,039,803	+				-0.2
2,039,811	-				+0.1
2,039,811	-				-0.6
2,039,811	-				-0.1
2,039,811	-				-0.0
2,039,811	-				-0.0
2,039,815	+				-1.4
2,039,823	-				-0.3
2,039,877	-				-0.0
2,039,906	+				-0.2
2,039,935	+				-0.7
2,039,972	-				+0.6
2,039,989	+				-0.1
2,039,989	+				+0.6
2,039,994	+				-1.0
2,039,994	+				-0.6
2,040,004	+				+0.5
2,040,020	+		TX73_009325	0.11	+0.3
2,040,028	-		TX73_009325	0.12	+0.8
2,040,046	-		TX73_009325	0.15	-2.0
2,040,047	-		TX73_009325	0.16	+0.1
2,040,053	+		TX73_009325	0.17	-1.3
2,040,061	-		TX73_009325	0.18	+0.7
2,040,076	-		TX73_009325	0.21	+0.3
2,040,078	-		TX73_009325	0.21	+0.5
2,040,083	+		TX73_009325	0.22	-0.9
2,040,104	+		TX73_009325	0.26	-0.0
2,040,160	-		TX73_009325	0.36	-1.3
2,040,175	-		TX73_009325	0.39	+0.4
2,040,225	+		TX73_009325	0.48	+0.0
2,040,225	+		TX73_009325	0.48	+0.3
2,040,225	+		TX73_009325	0.48	+0.5
2,040,233	-		TX73_009325	0.50	-0.7
2,040,299	+		TX73_009325	0.62	-0.0
2,040,304	+		TX73_009325	0.63	+0.1
2,040,342	+		TX73_009325	0.70	-0.8
2,040,342	+		TX73_009325	0.70	-0.7
2,040,364	-		TX73_009325	0.74	-0.5
2,040,406	+		TX73_009325	0.81	-1.0
2,040,408	-		TX73_009325	0.82	-0.4
2,040,414	-		TX73_009325	0.83	-1.3
2,040,414	-		TX73_009325	0.83	-0.6
2,040,462	+				-0.9
2,040,465	-				+0.1
2,040,470	+				+0.1
2,040,482	-				-0.2
2,040,482	-				-0.4
2,040,502	+				-0.6
2,040,522	+				-3.6
2,040,574	+		TX73_009330	0.10	-2.6
2,040,578	+		TX73_009330	0.11	-0.7
2,040,578	-		TX73_009330	0.11	-3.6
2,040,579	+		TX73_009330	0.11	-2.2
2,040,579	+		TX73_009330	0.11	-4.1
2,040,586	-		TX73_009330	0.12	-2.3
2,040,591	+		TX73_009330	0.13	-1.7
2,040,631	+		TX73_009330	0.19	-0.5
2,040,637	+		TX73_009330	0.20	-1.7
2,040,649	+		TX73_009330	0.22	+0.8
2,040,649	+		TX73_009330	0.22	-2.8
2,040,649	+		TX73_009330	0.22	-1.7
2,040,649	+		TX73_009330	0.22	-1.9
2,040,657	-		TX73_009330	0.23	-2.5
2,040,657	-		TX73_009330	0.23	-0.6
2,040,659	+		TX73_009330	0.23	-2.3
2,040,659	+		TX73_009330	0.23	-1.5
2,040,715	-		TX73_009330	0.32	-0.8
2,040,762	-		TX73_009330	0.39	-1.3
2,040,773	+		TX73_009330	0.41	-2.4
2,040,803	+		TX73_009330	0.46	-0.3
2,040,815	-		TX73_009330	0.48	-1.6
2,040,817	-		TX73_009330	0.48	-0.9
2,040,826	+		TX73_009330	0.49	-0.5
2,040,883	+		TX73_009330	0.58	-2.5
2,040,890	+		TX73_009330	0.59	-3.2
2,040,895	+		TX73_009330	0.60	-2.7
2,040,944	+		TX73_009330	0.68	-2.5
2,040,953	+		TX73_009330	0.69	-2.0
2,041,028	+		TX73_009330	0.81	-2.1
2,041,028	+		TX73_009330	0.81	-2.7
2,041,029	+		TX73_009330	0.81	-0.9
2,041,036	-		TX73_009330	0.82	-2.3
2,041,091	-				-1.7
2,041,119	+				-3.0
2,041,119	+				-2.7
2,041,119	+				-1.0
2,041,127	-				+1.1
2,041,139	+				-0.8
2,041,153	+				-0.4
2,041,247	+				+0.6
2,041,265	-				+0.3
2,041,289	-				+0.6
2,041,302	+		TX73_009335	0.11	+0.3
2,041,302	+		TX73_009335	0.11	-0.2
2,041,302	+		TX73_009335	0.11	+0.1
2,041,310	-		TX73_009335	0.13	-0.6
2,041,314	+		TX73_009335	0.14	+0.3
2,041,332	-		TX73_009335	0.19	+0.7
2,041,336	+		TX73_009335	0.21	+0.2
2,041,336	+		TX73_009335	0.21	+0.6
2,041,344	-		TX73_009335	0.23	-1.1
2,041,369	-		TX73_009335	0.30	-1.9
2,041,380	-		TX73_009335	0.33	-0.7
2,041,407	-		TX73_009335	0.41	+1.1
2,041,407	-		TX73_009335	0.41	-0.3
2,041,425	-		TX73_009335	0.46	-0.5
2,041,427	+		TX73_009335	0.47	-0.5
2,041,449	+		TX73_009335	0.53	+1.4
2,041,457	-		TX73_009335	0.56	+0.7
2,041,461	+		TX73_009335	0.57	-1.4
2,041,522	+		TX73_009335	0.74	-0.1
2,041,549	+		TX73_009335	0.82	+0.1
2,041,557	-		TX73_009335	0.85	+1.0
2,041,569	+		TX73_009335	0.88	+0.1
2,041,569	+		TX73_009335	0.88	-0.4
2,041,585	-				+0.7
2,041,598	+				-0.1
2,041,603	+				+0.1
2,041,605	-				-0.4
2,041,606	-				-0.0
2,041,606	-				+0.4
2,041,606	-				+0.2
2,041,606	-				+1.5
2,041,606	-				-2.4
2,041,611	-				-0.7
2,041,611	-				+0.4
2,041,613	-				-0.1
2,041,631	+				-1.7
2,041,637	+				-0.5
2,041,709	+				-1.1
2,041,721	+				+0.0
2,041,734	-				+0.4
2,041,751	-				+0.3
2,041,755	-				-0.4
2,041,782	+				+0.5
2,041,850	-				+0.3
2,041,850	-				+0.6
2,041,859	+				-0.8
2,041,861	+				-1.0
2,041,865	-				-0.2
2,041,880	+				-1.8
2,041,882	+				-1.0
2,041,899	-		TX73_009340	0.10	+1.7
2,041,919	-		TX73_009340	0.11	+0.1
2,041,944	+		TX73_009340	0.12	+0.0
2,041,944	+		TX73_009340	0.12	-2.0
2,041,944	+		TX73_009340	0.12	+0.6
2,041,952	-		TX73_009340	0.13	-1.0
2,041,952	-		TX73_009340	0.13	-0.0
2,041,952	-		TX73_009340	0.13	-1.2
2,041,952	-		TX73_009340	0.13	-0.7
2,041,958	+		TX73_009340	0.13	+0.2
2,041,960	-		TX73_009340	0.13	-0.3
2,041,979	-		TX73_009340	0.14	-0.4
2,041,986	+		TX73_009340	0.14	-0.6
2,042,004	-		TX73_009340	0.15	+0.0
2,042,023	+		TX73_009340	0.16	-0.6
2,042,040	+		TX73_009340	0.17	+0.7
2,042,050	+		TX73_009340	0.17	+0.2
2,042,050	+		TX73_009340	0.17	-1.4
2,042,056	-		TX73_009340	0.17	+0.6
2,042,058	-		TX73_009340	0.17	-0.4
2,042,101	+		TX73_009340	0.19	-0.2