Strain Fitness in Escherichia coli Nissle 1917 around ECOLIN_RS10185

Experiment: Bas37

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECOLIN_RS10180 and ECOLIN_RS10185 are separated by 45 nucleotidesECOLIN_RS10185 and ECOLIN_RS10190 are separated by 191 nucleotides ECOLIN_RS10180: ECOLIN_RS10180 - MFS transporter, at 1,994,261 to 1,995,634 _RS10180 ECOLIN_RS10185: ECOLIN_RS10185 - protease HtpX, at 1,995,680 to 1,996,561 _RS10185 ECOLIN_RS10190: ECOLIN_RS10190 - carboxy terminal-processing peptidase, at 1,996,753 to 1,998,801 _RS10190 Position (kb) 1995 1996 1997Strain fitness (log2 ratio) -1 0 1at 1995.672 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas37
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1,995,672 - +1.1

Or see this region's nucleotide sequence