Experiment: Bas21
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECOLIN_RS23735 and ECOLIN_RS23740 overlap by 1 nucleotides ECOLIN_RS23740 and ECOLIN_RS23745 overlap by 4 nucleotides ECOLIN_RS23745 and ECOLIN_RS23750 are separated by 0 nucleotides
ECOLIN_RS23735: ECOLIN_RS23735 - alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI, at 4,785,818 to 4,786,882
_RS23735
ECOLIN_RS23740: ECOLIN_RS23740 - phosphonate C-P lyase system protein PhnH, at 4,786,882 to 4,787,466
_RS23740
ECOLIN_RS23745: ECOLIN_RS23745 - phosphonate C-P lyase system protein PhnG, at 4,787,463 to 4,787,915
_RS23745
ECOLIN_RS23750: ECOLIN_RS23750 - phosphonate metabolism transcriptional regulator PhnF, at 4,787,916 to 4,788,641
_RS23750
Position (kb) 4786
4787
4788 Strain fitness (log2 ratio) -1
0
1
2 at 4785.988 kb on - strand, within ECOLIN_RS23735 at 4786.512 kb on + strand, within ECOLIN_RS23735 at 4786.512 kb on + strand, within ECOLIN_RS23735 at 4786.878 kb on + strand at 4786.878 kb on + strand at 4786.878 kb on + strand at 4786.878 kb on + strand at 4786.878 kb on + strand at 4786.878 kb on + strand at 4786.878 kb on + strand at 4786.879 kb on - strand at 4786.879 kb on - strand at 4786.879 kb on - strand at 4787.040 kb on + strand, within ECOLIN_RS23740 at 4787.040 kb on + strand, within ECOLIN_RS23740 at 4787.227 kb on - strand, within ECOLIN_RS23740 at 4787.673 kb on - strand, within ECOLIN_RS23745 at 4788.196 kb on + strand, within ECOLIN_RS23750
Per-strain Table
Position Strand Gene LocusTag Fraction Bas21 remove 4,785,988 - ECOLIN_RS23735 0.16 +0.2 4,786,512 + ECOLIN_RS23735 0.65 -0.2 4,786,512 + ECOLIN_RS23735 0.65 -0.0 4,786,878 + -0.3 4,786,878 + -0.1 4,786,878 + +0.2 4,786,878 + -0.1 4,786,878 + +0.8 4,786,878 + -0.5 4,786,878 + -0.4 4,786,879 - -0.2 4,786,879 - +0.1 4,786,879 - +0.1 4,787,040 + ECOLIN_RS23740 0.27 -0.4 4,787,040 + ECOLIN_RS23740 0.27 -1.2 4,787,227 - ECOLIN_RS23740 0.59 -0.1 4,787,673 - ECOLIN_RS23745 0.46 +2.0 4,788,196 + ECOLIN_RS23750 0.39 -0.3
Or see this region's nucleotide sequence