Experiment: MoYLS4 with Spectinomycin 0.0125mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0947 and DVU0948 are separated by 175 nucleotides DVU0948 and DVU0949 are separated by 47 nucleotides DVU0949 and moeA-2 are separated by 79 nucleotides
DVU0947: DVU0947 - membrane protein, putative (TIGR), at 1,041,478 to 1,042,383
DVU0947
DVU0948: DVU0948 - conserved hypothetical protein (TIGR), at 1,042,559 to 1,042,987
DVU0948
DVU0949: DVU0949 - conserved domain protein (TIGR), at 1,043,035 to 1,043,796
DVU0949
DVU0951: moeA-2 - molybdopterin biosynthesis MoeA protein, putative (TIGR), at 1,043,876 to 1,045,294
moeA-2
Position (kb)
1043
1044 Strain fitness (log2 ratio)
-2
-1
0
1 at 1042.272 kb on - strand, within DVU0947 at 1042.286 kb on + strand, within DVU0947 at 1042.296 kb on - strand at 1042.431 kb on + strand at 1042.512 kb on + strand at 1042.556 kb on - strand at 1042.564 kb on + strand at 1042.706 kb on + strand, within DVU0948 at 1042.723 kb on + strand, within DVU0948 at 1042.782 kb on + strand, within DVU0948 at 1042.788 kb on + strand, within DVU0948 at 1042.866 kb on - strand, within DVU0948 at 1042.871 kb on - strand, within DVU0948 at 1042.878 kb on - strand, within DVU0948 at 1042.952 kb on - strand at 1043.032 kb on + strand at 1043.047 kb on + strand at 1043.047 kb on + strand at 1043.117 kb on - strand, within DVU0949 at 1043.185 kb on - strand, within DVU0949 at 1043.246 kb on + strand, within DVU0949 at 1043.278 kb on - strand, within DVU0949 at 1043.367 kb on - strand, within DVU0949 at 1043.452 kb on - strand, within DVU0949 at 1043.469 kb on - strand, within DVU0949 at 1043.482 kb on + strand, within DVU0949 at 1043.501 kb on + strand, within DVU0949 at 1043.506 kb on + strand, within DVU0949 at 1043.532 kb on + strand, within DVU0949 at 1043.567 kb on - strand, within DVU0949 at 1043.587 kb on - strand, within DVU0949 at 1043.655 kb on - strand, within DVU0949 at 1043.666 kb on - strand, within DVU0949 at 1043.753 kb on + strand at 1043.901 kb on - strand at 1043.905 kb on + strand at 1043.915 kb on + strand at 1043.915 kb on + strand at 1043.942 kb on + strand at 1043.989 kb on + strand at 1044.210 kb on + strand, within moeA-2 at 1044.234 kb on + strand, within moeA-2 at 1044.254 kb on + strand, within moeA-2 at 1044.335 kb on - strand, within moeA-2 at 1044.477 kb on - strand, within moeA-2 at 1044.488 kb on + strand, within moeA-2 at 1044.683 kb on - strand, within moeA-2 at 1044.737 kb on + strand, within moeA-2
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.0125mg/mL remove 1,042,272 - DVU0947 0.88 -0.1 1,042,286 + DVU0947 0.89 +0.2 1,042,296 - +0.6 1,042,431 + -0.4 1,042,512 + +0.5 1,042,556 - +0.0 1,042,564 + +0.2 1,042,706 + DVU0948 0.34 +1.3 1,042,723 + DVU0948 0.38 -0.4 1,042,782 + DVU0948 0.52 -0.9 1,042,788 + DVU0948 0.53 -0.4 1,042,866 - DVU0948 0.72 +0.7 1,042,871 - DVU0948 0.73 -0.2 1,042,878 - DVU0948 0.74 +0.0 1,042,952 - -0.3 1,043,032 + -0.2 1,043,047 + -0.3 1,043,047 + -0.3 1,043,117 - DVU0949 0.11 -0.2 1,043,185 - DVU0949 0.20 -0.4 1,043,246 + DVU0949 0.28 -0.5 1,043,278 - DVU0949 0.32 -0.1 1,043,367 - DVU0949 0.44 +0.1 1,043,452 - DVU0949 0.55 -0.8 1,043,469 - DVU0949 0.57 -2.3 1,043,482 + DVU0949 0.59 +0.4 1,043,501 + DVU0949 0.61 -0.6 1,043,506 + DVU0949 0.62 +1.6 1,043,532 + DVU0949 0.65 -2.4 1,043,567 - DVU0949 0.70 -1.1 1,043,587 - DVU0949 0.72 -0.0 1,043,655 - DVU0949 0.81 -0.2 1,043,666 - DVU0949 0.83 -0.2 1,043,753 + -0.4 1,043,901 - -0.3 1,043,905 + +0.4 1,043,915 + -0.4 1,043,915 + -0.0 1,043,942 + +0.1 1,043,989 + -0.1 1,044,210 + moeA-2 DVU0951 0.24 -0.3 1,044,234 + moeA-2 DVU0951 0.25 +0.2 1,044,254 + moeA-2 DVU0951 0.27 -0.4 1,044,335 - moeA-2 DVU0951 0.32 +0.3 1,044,477 - moeA-2 DVU0951 0.42 -0.9 1,044,488 + moeA-2 DVU0951 0.43 -0.8 1,044,683 - moeA-2 DVU0951 0.57 -0.5 1,044,737 + moeA-2 DVU0951 0.61 +0.2
Or see this region's nucleotide sequence