Experiment: MoYLS4 with Spectinomycin 0.0125mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0882 and nrdH are separated by 273 nucleotides nrdH and ftrB overlap by 4 nucleotides ftrB and DVU0885 are separated by 441 nucleotides
DVU0882: DVU0882 - hypothetical protein (TIGR), at 973,743 to 974,207
DVU0882
DVU0883: nrdH - glutaredoxin, putative (TIGR), at 974,481 to 974,738
nrdH
DVU0884: ftrB - conserved hypothetical protein (TIGR), at 974,735 to 975,079
ftrB
DVU0885: DVU0885 - amidohydrolase family protein (TIGR), at 975,521 to 976,309
DVU0885
Position (kb) 974
975
976 Strain fitness (log2 ratio) -2
-1
0
1
2 at 973.854 kb on + strand, within DVU0882 at 973.892 kb on - strand, within DVU0882 at 973.936 kb on - strand, within DVU0882 at 973.999 kb on + strand, within DVU0882 at 974.000 kb on + strand, within DVU0882 at 974.062 kb on - strand, within DVU0882 at 974.086 kb on + strand, within DVU0882 at 974.091 kb on + strand, within DVU0882 at 974.107 kb on + strand, within DVU0882 at 974.115 kb on - strand, within DVU0882 at 974.117 kb on + strand, within DVU0882 at 974.146 kb on - strand, within DVU0882 at 974.204 kb on - strand at 974.235 kb on - strand at 974.267 kb on + strand at 974.321 kb on - strand at 974.368 kb on + strand at 974.375 kb on + strand at 974.404 kb on - strand at 974.407 kb on + strand at 974.407 kb on + strand at 974.513 kb on + strand, within nrdH at 974.519 kb on - strand, within nrdH at 974.521 kb on - strand, within nrdH at 974.538 kb on - strand, within nrdH at 974.647 kb on - strand, within nrdH at 974.647 kb on - strand, within nrdH at 974.709 kb on + strand, within nrdH at 974.772 kb on - strand, within ftrB at 974.814 kb on - strand, within ftrB at 974.822 kb on + strand, within ftrB at 974.884 kb on - strand, within ftrB at 974.920 kb on + strand, within ftrB at 974.928 kb on - strand, within ftrB at 974.929 kb on - strand, within ftrB at 975.027 kb on - strand, within ftrB at 975.027 kb on - strand, within ftrB at 975.250 kb on + strand at 975.399 kb on + strand at 975.399 kb on - strand at 975.412 kb on + strand at 975.420 kb on - strand at 975.593 kb on + strand at 975.685 kb on + strand, within DVU0885 at 975.691 kb on + strand, within DVU0885 at 975.692 kb on - strand, within DVU0885 at 975.740 kb on - strand, within DVU0885 at 975.740 kb on - strand, within DVU0885 at 975.753 kb on + strand, within DVU0885 at 975.768 kb on + strand, within DVU0885 at 975.951 kb on - strand, within DVU0885 at 975.966 kb on + strand, within DVU0885 at 975.995 kb on + strand, within DVU0885 at 976.001 kb on - strand, within DVU0885 at 976.001 kb on - strand, within DVU0885 at 976.045 kb on + strand, within DVU0885 at 976.067 kb on + strand, within DVU0885 at 976.074 kb on + strand, within DVU0885
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Spectinomycin 0.0125mg/mL remove 973,854 + DVU0882 0.24 -1.5 973,892 - DVU0882 0.32 -0.1 973,936 - DVU0882 0.42 -1.5 973,999 + DVU0882 0.55 +2.1 974,000 + DVU0882 0.55 -2.1 974,062 - DVU0882 0.69 -0.8 974,086 + DVU0882 0.74 -0.1 974,091 + DVU0882 0.75 +1.6 974,107 + DVU0882 0.78 +0.0 974,115 - DVU0882 0.80 -0.4 974,117 + DVU0882 0.80 -0.4 974,146 - DVU0882 0.87 +1.4 974,204 - +0.0 974,235 - -0.1 974,267 + -0.0 974,321 - +0.0 974,368 + -0.7 974,375 + -1.3 974,404 - +0.5 974,407 + +0.0 974,407 + -0.3 974,513 + nrdH DVU0883 0.12 -0.0 974,519 - nrdH DVU0883 0.15 -0.0 974,521 - nrdH DVU0883 0.16 +0.4 974,538 - nrdH DVU0883 0.22 -1.1 974,647 - nrdH DVU0883 0.64 -0.3 974,647 - nrdH DVU0883 0.64 +0.4 974,709 + nrdH DVU0883 0.88 -0.2 974,772 - ftrB DVU0884 0.11 -1.2 974,814 - ftrB DVU0884 0.23 -0.9 974,822 + ftrB DVU0884 0.25 -0.6 974,884 - ftrB DVU0884 0.43 -0.7 974,920 + ftrB DVU0884 0.54 +0.1 974,928 - ftrB DVU0884 0.56 -0.4 974,929 - ftrB DVU0884 0.56 -0.1 975,027 - ftrB DVU0884 0.85 -0.5 975,027 - ftrB DVU0884 0.85 -1.0 975,250 + -0.0 975,399 + +0.1 975,399 - +0.0 975,412 + -0.2 975,420 - -1.0 975,593 + +0.2 975,685 + DVU0885 0.21 +0.1 975,691 + DVU0885 0.22 +0.2 975,692 - DVU0885 0.22 -0.3 975,740 - DVU0885 0.28 -0.0 975,740 - DVU0885 0.28 -2.0 975,753 + DVU0885 0.29 +0.5 975,768 + DVU0885 0.31 -1.4 975,951 - DVU0885 0.54 -0.1 975,966 + DVU0885 0.56 +0.4 975,995 + DVU0885 0.60 -0.3 976,001 - DVU0885 0.61 -0.0 976,001 - DVU0885 0.61 -0.1 976,045 + DVU0885 0.66 +0.0 976,067 + DVU0885 0.69 -0.3 976,074 + DVU0885 0.70 -0.4
Or see this region's nucleotide sequence