Experiment: diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1078_RS17995 and HMPREF1078_RS20035 are separated by 22 nucleotides HMPREF1078_RS20035 and HMPREF1078_RS18005 are separated by 115 nucleotides HMPREF1078_RS18005 and HMPREF1078_RS18010 are separated by 565 nucleotides
HMPREF1078_RS17995: HMPREF1078_RS17995 - DUF4838 domain-containing protein, at 37,634 to 39,070
_RS17995
HMPREF1078_RS20035: HMPREF1078_RS20035 - tyrosine-type recombinase/integrase, at 39,093 to 39,317
_RS20035
HMPREF1078_RS18005: HMPREF1078_RS18005 - reverse transcriptase/maturase family protein, at 39,433 to 41,250
_RS18005
HMPREF1078_RS18010: HMPREF1078_RS18010 - site-specific integrase, at 41,816 to 42,826
_RS18010
Position (kb) 39
40
41
42 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 38.436 kb on + strand, within HMPREF1078_RS17995 at 38.436 kb on + strand, within HMPREF1078_RS17995 at 38.437 kb on - strand, within HMPREF1078_RS17995 at 38.490 kb on + strand, within HMPREF1078_RS17995 at 38.496 kb on + strand, within HMPREF1078_RS17995 at 38.496 kb on + strand, within HMPREF1078_RS17995 at 38.497 kb on - strand, within HMPREF1078_RS17995 at 38.503 kb on - strand, within HMPREF1078_RS17995 at 38.520 kb on + strand, within HMPREF1078_RS17995 at 38.523 kb on + strand, within HMPREF1078_RS17995 at 38.523 kb on + strand, within HMPREF1078_RS17995 at 38.540 kb on - strand, within HMPREF1078_RS17995 at 38.540 kb on - strand, within HMPREF1078_RS17995 at 38.540 kb on - strand, within HMPREF1078_RS17995 at 38.595 kb on + strand, within HMPREF1078_RS17995 at 38.636 kb on + strand, within HMPREF1078_RS17995 at 38.759 kb on + strand, within HMPREF1078_RS17995 at 38.760 kb on - strand, within HMPREF1078_RS17995 at 38.760 kb on - strand, within HMPREF1078_RS17995 at 38.761 kb on + strand, within HMPREF1078_RS17995 at 38.761 kb on + strand, within HMPREF1078_RS17995 at 38.762 kb on - strand, within HMPREF1078_RS17995 at 38.852 kb on + strand, within HMPREF1078_RS17995 at 38.853 kb on - strand, within HMPREF1078_RS17995 at 38.916 kb on + strand, within HMPREF1078_RS17995 at 38.923 kb on - strand, within HMPREF1078_RS17995 at 38.969 kb on - strand at 39.089 kb on - strand at 39.089 kb on - strand at 39.089 kb on - strand at 39.089 kb on - strand at 39.091 kb on - strand at 39.091 kb on - strand at 39.219 kb on + strand, within HMPREF1078_RS20035 at 39.219 kb on + strand, within HMPREF1078_RS20035 at 39.219 kb on + strand, within HMPREF1078_RS20035 at 39.219 kb on + strand, within HMPREF1078_RS20035 at 39.220 kb on - strand, within HMPREF1078_RS20035 at 39.318 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.388 kb on + strand at 39.389 kb on - strand at 39.389 kb on - strand at 39.389 kb on - strand at 39.389 kb on - strand at 39.389 kb on - strand at 39.402 kb on + strand at 39.403 kb on - strand at 39.405 kb on - strand at 39.426 kb on - strand at 39.431 kb on + strand at 39.434 kb on + strand at 39.454 kb on + strand at 39.490 kb on - strand at 39.501 kb on + strand at 39.526 kb on - strand at 39.549 kb on + strand at 39.549 kb on + strand at 39.550 kb on - strand at 39.550 kb on - strand at 39.550 kb on - strand at 39.553 kb on + strand at 39.558 kb on + strand at 39.589 kb on + strand at 39.590 kb on - strand at 39.641 kb on + strand, within HMPREF1078_RS18005 at 39.642 kb on - strand, within HMPREF1078_RS18005 at 39.642 kb on - strand, within HMPREF1078_RS18005 at 39.642 kb on - strand, within HMPREF1078_RS18005 at 39.642 kb on - strand, within HMPREF1078_RS18005 at 39.656 kb on - strand, within HMPREF1078_RS18005 at 39.656 kb on - strand, within HMPREF1078_RS18005 at 39.657 kb on + strand, within HMPREF1078_RS18005 at 39.657 kb on + strand, within HMPREF1078_RS18005 at 39.657 kb on + strand, within HMPREF1078_RS18005 at 39.657 kb on + strand, within HMPREF1078_RS18005 at 39.658 kb on - strand, within HMPREF1078_RS18005 at 39.680 kb on + strand, within HMPREF1078_RS18005 at 39.680 kb on + strand, within HMPREF1078_RS18005 at 39.681 kb on - strand, within HMPREF1078_RS18005 at 39.719 kb on + strand, within HMPREF1078_RS18005 at 39.724 kb on + strand, within HMPREF1078_RS18005 at 39.725 kb on - strand, within HMPREF1078_RS18005 at 39.746 kb on - strand, within HMPREF1078_RS18005 at 39.748 kb on - strand, within HMPREF1078_RS18005 at 39.750 kb on + strand, within HMPREF1078_RS18005 at 39.751 kb on - strand, within HMPREF1078_RS18005 at 39.756 kb on + strand, within HMPREF1078_RS18005 at 39.756 kb on + strand, within HMPREF1078_RS18005 at 39.757 kb on - strand, within HMPREF1078_RS18005 at 39.757 kb on - strand, within HMPREF1078_RS18005 at 39.757 kb on - strand, within HMPREF1078_RS18005 at 39.757 kb on - strand, within HMPREF1078_RS18005 at 39.758 kb on + strand, within HMPREF1078_RS18005 at 39.758 kb on + strand, within HMPREF1078_RS18005 at 39.758 kb on + strand, within HMPREF1078_RS18005 at 39.758 kb on + strand, within HMPREF1078_RS18005 at 39.759 kb on - strand, within HMPREF1078_RS18005 at 39.851 kb on + strand, within HMPREF1078_RS18005 at 39.852 kb on - strand, within HMPREF1078_RS18005 at 39.885 kb on - strand, within HMPREF1078_RS18005 at 39.885 kb on - strand, within HMPREF1078_RS18005 at 39.891 kb on + strand, within HMPREF1078_RS18005 at 39.908 kb on + strand, within HMPREF1078_RS18005 at 39.908 kb on + strand, within HMPREF1078_RS18005 at 39.909 kb on - strand, within HMPREF1078_RS18005 at 39.909 kb on - strand, within HMPREF1078_RS18005 at 39.909 kb on - strand, within HMPREF1078_RS18005 at 39.911 kb on + strand, within HMPREF1078_RS18005 at 39.917 kb on + strand, within HMPREF1078_RS18005 at 39.941 kb on + strand, within HMPREF1078_RS18005 at 39.941 kb on + strand, within HMPREF1078_RS18005 at 39.942 kb on - strand, within HMPREF1078_RS18005 at 39.942 kb on - strand, within HMPREF1078_RS18005 at 39.954 kb on + strand, within HMPREF1078_RS18005 at 39.973 kb on + strand, within HMPREF1078_RS18005 at 39.973 kb on + strand, within HMPREF1078_RS18005 at 39.974 kb on - strand, within HMPREF1078_RS18005 at 39.978 kb on + strand, within HMPREF1078_RS18005 at 39.978 kb on + strand, within HMPREF1078_RS18005 at 39.979 kb on - strand, within HMPREF1078_RS18005 at 39.980 kb on + strand, within HMPREF1078_RS18005 at 39.980 kb on + strand, within HMPREF1078_RS18005 at 39.981 kb on - strand, within HMPREF1078_RS18005 at 39.981 kb on - strand, within HMPREF1078_RS18005 at 39.981 kb on - strand, within HMPREF1078_RS18005 at 39.999 kb on + strand, within HMPREF1078_RS18005 at 39.999 kb on + strand, within HMPREF1078_RS18005 at 39.999 kb on + strand, within HMPREF1078_RS18005 at 40.000 kb on - strand, within HMPREF1078_RS18005 at 40.000 kb on - strand, within HMPREF1078_RS18005 at 40.015 kb on - strand, within HMPREF1078_RS18005 at 40.043 kb on + strand, within HMPREF1078_RS18005 at 40.043 kb on + strand, within HMPREF1078_RS18005 at 40.044 kb on - strand, within HMPREF1078_RS18005 at 40.044 kb on - strand, within HMPREF1078_RS18005 at 40.059 kb on + strand, within HMPREF1078_RS18005 at 40.079 kb on - strand, within HMPREF1078_RS18005 at 40.079 kb on - strand, within HMPREF1078_RS18005 at 40.117 kb on + strand, within HMPREF1078_RS18005 at 40.117 kb on + strand, within HMPREF1078_RS18005 at 40.118 kb on - strand, within HMPREF1078_RS18005 at 40.137 kb on + strand, within HMPREF1078_RS18005 at 40.138 kb on - strand, within HMPREF1078_RS18005 at 40.207 kb on + strand, within HMPREF1078_RS18005 at 40.260 kb on + strand, within HMPREF1078_RS18005 at 40.261 kb on - strand, within HMPREF1078_RS18005 at 40.311 kb on + strand, within HMPREF1078_RS18005 at 40.328 kb on + strand, within HMPREF1078_RS18005 at 40.333 kb on + strand, within HMPREF1078_RS18005 at 40.333 kb on + strand, within HMPREF1078_RS18005 at 40.333 kb on + strand, within HMPREF1078_RS18005 at 40.333 kb on + strand, within HMPREF1078_RS18005 at 40.333 kb on + strand, within HMPREF1078_RS18005 at 40.333 kb on + strand, within HMPREF1078_RS18005 at 40.334 kb on - strand, within HMPREF1078_RS18005 at 40.334 kb on - strand, within HMPREF1078_RS18005 at 40.334 kb on - strand, within HMPREF1078_RS18005 at 40.334 kb on - strand, within HMPREF1078_RS18005 at 40.334 kb on - strand, within HMPREF1078_RS18005 at 40.334 kb on - strand, within HMPREF1078_RS18005 at 40.356 kb on + strand, within HMPREF1078_RS18005 at 40.356 kb on + strand, within HMPREF1078_RS18005 at 40.356 kb on + strand, within HMPREF1078_RS18005 at 40.357 kb on - strand, within HMPREF1078_RS18005 at 40.357 kb on - strand, within HMPREF1078_RS18005 at 40.357 kb on - strand, within HMPREF1078_RS18005 at 40.357 kb on - strand, within HMPREF1078_RS18005 at 40.434 kb on + strand, within HMPREF1078_RS18005 at 40.434 kb on + strand, within HMPREF1078_RS18005 at 40.435 kb on - strand, within HMPREF1078_RS18005 at 40.471 kb on + strand, within HMPREF1078_RS18005 at 40.471 kb on + strand, within HMPREF1078_RS18005 at 40.472 kb on - strand, within HMPREF1078_RS18005 at 40.495 kb on - strand, within HMPREF1078_RS18005 at 40.503 kb on - strand, within HMPREF1078_RS18005 at 40.514 kb on - strand, within HMPREF1078_RS18005 at 40.551 kb on - strand, within HMPREF1078_RS18005 at 40.558 kb on + strand, within HMPREF1078_RS18005 at 40.558 kb on + strand, within HMPREF1078_RS18005 at 40.559 kb on - strand, within HMPREF1078_RS18005 at 40.562 kb on + strand, within HMPREF1078_RS18005 at 40.563 kb on - strand, within HMPREF1078_RS18005 at 40.563 kb on - strand, within HMPREF1078_RS18005 at 40.563 kb on - strand, within HMPREF1078_RS18005 at 40.563 kb on - strand, within HMPREF1078_RS18005 at 40.563 kb on - strand, within HMPREF1078_RS18005 at 40.583 kb on + strand, within HMPREF1078_RS18005 at 40.584 kb on - strand, within HMPREF1078_RS18005 at 40.587 kb on + strand, within HMPREF1078_RS18005 at 40.598 kb on - strand, within HMPREF1078_RS18005 at 40.599 kb on + strand, within HMPREF1078_RS18005 at 40.600 kb on - strand, within HMPREF1078_RS18005 at 40.634 kb on + strand, within HMPREF1078_RS18005 at 40.638 kb on + strand, within HMPREF1078_RS18005 at 40.638 kb on + strand, within HMPREF1078_RS18005 at 40.639 kb on - strand, within HMPREF1078_RS18005 at 40.646 kb on + strand, within HMPREF1078_RS18005 at 40.646 kb on + strand, within HMPREF1078_RS18005 at 40.647 kb on - strand, within HMPREF1078_RS18005 at 40.647 kb on - strand, within HMPREF1078_RS18005 at 40.664 kb on + strand, within HMPREF1078_RS18005 at 40.664 kb on + strand, within HMPREF1078_RS18005 at 40.665 kb on - strand, within HMPREF1078_RS18005 at 40.669 kb on + strand, within HMPREF1078_RS18005 at 40.675 kb on + strand, within HMPREF1078_RS18005 at 40.744 kb on - strand, within HMPREF1078_RS18005 at 40.746 kb on + strand, within HMPREF1078_RS18005 at 40.746 kb on + strand, within HMPREF1078_RS18005 at 40.747 kb on - strand, within HMPREF1078_RS18005 at 40.755 kb on + strand, within HMPREF1078_RS18005 at 40.755 kb on + strand, within HMPREF1078_RS18005 at 40.756 kb on - strand, within HMPREF1078_RS18005 at 40.756 kb on - strand, within HMPREF1078_RS18005 at 40.756 kb on - strand, within HMPREF1078_RS18005 at 40.759 kb on - strand, within HMPREF1078_RS18005 at 40.759 kb on - strand, within HMPREF1078_RS18005 at 40.819 kb on + strand, within HMPREF1078_RS18005 at 40.820 kb on - strand, within HMPREF1078_RS18005 at 40.820 kb on - strand, within HMPREF1078_RS18005 at 40.821 kb on + strand, within HMPREF1078_RS18005 at 40.822 kb on - strand, within HMPREF1078_RS18005 at 40.848 kb on + strand, within HMPREF1078_RS18005 at 40.911 kb on + strand, within HMPREF1078_RS18005 at 40.911 kb on + strand, within HMPREF1078_RS18005 at 40.911 kb on + strand, within HMPREF1078_RS18005 at 40.912 kb on - strand, within HMPREF1078_RS18005 at 40.912 kb on - strand, within HMPREF1078_RS18005 at 40.915 kb on + strand, within HMPREF1078_RS18005 at 40.991 kb on + strand, within HMPREF1078_RS18005 at 40.991 kb on + strand, within HMPREF1078_RS18005 at 40.992 kb on - strand, within HMPREF1078_RS18005 at 40.992 kb on - strand, within HMPREF1078_RS18005 at 40.992 kb on - strand, within HMPREF1078_RS18005 at 40.992 kb on - strand, within HMPREF1078_RS18005 at 41.085 kb on + strand at 41.086 kb on - strand at 41.106 kb on + strand at 41.107 kb on - strand at 41.107 kb on - strand at 41.109 kb on + strand at 41.110 kb on - strand at 41.122 kb on - strand at 41.122 kb on - strand at 41.122 kb on - strand at 41.122 kb on - strand at 41.123 kb on + strand at 41.123 kb on + strand at 41.123 kb on + strand at 41.123 kb on + strand at 41.123 kb on + strand at 41.124 kb on - strand at 41.124 kb on - strand at 41.124 kb on - strand at 41.127 kb on + strand at 41.127 kb on + strand at 41.127 kb on + strand at 41.127 kb on + strand at 41.127 kb on + strand at 41.128 kb on - strand at 41.128 kb on - strand at 41.128 kb on - strand at 41.128 kb on - strand at 41.128 kb on - strand at 41.135 kb on + strand at 41.141 kb on - strand at 41.141 kb on - strand at 41.145 kb on - strand at 41.186 kb on + strand at 41.187 kb on - strand at 41.206 kb on - strand at 41.206 kb on - strand at 41.231 kb on - strand at 41.231 kb on - strand at 41.231 kb on - strand at 41.250 kb on + strand at 41.250 kb on + strand at 41.250 kb on + strand at 41.251 kb on - strand at 41.251 kb on - strand at 41.280 kb on + strand at 41.320 kb on - strand at 41.334 kb on - strand at 41.369 kb on + strand at 41.370 kb on - strand at 41.375 kb on + strand at 41.382 kb on - strand at 41.382 kb on - strand at 41.382 kb on - strand at 41.396 kb on + strand at 41.488 kb on + strand at 41.508 kb on + strand at 41.508 kb on + strand at 41.509 kb on - strand at 41.509 kb on - strand at 41.509 kb on - strand at 41.511 kb on - strand at 41.515 kb on + strand at 41.516 kb on - strand at 41.563 kb on + strand at 41.564 kb on - strand at 41.605 kb on + strand at 41.606 kb on - strand at 41.621 kb on + strand at 41.621 kb on + strand at 41.621 kb on + strand at 41.622 kb on - strand at 41.734 kb on + strand at 41.735 kb on - strand at 41.767 kb on + strand at 42.189 kb on + strand, within HMPREF1078_RS18010
Per-strain Table
Position Strand Gene LocusTag Fraction diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 remove 38,436 + HMPREF1078_RS17995 0.56 +1.7 38,436 + HMPREF1078_RS17995 0.56 -0.3 38,437 - HMPREF1078_RS17995 0.56 +0.9 38,490 + HMPREF1078_RS17995 0.60 -2.1 38,496 + HMPREF1078_RS17995 0.60 -0.7 38,496 + HMPREF1078_RS17995 0.60 -0.1 38,497 - HMPREF1078_RS17995 0.60 +1.3 38,503 - HMPREF1078_RS17995 0.60 -0.4 38,520 + HMPREF1078_RS17995 0.62 +0.1 38,523 + HMPREF1078_RS17995 0.62 -2.5 38,523 + HMPREF1078_RS17995 0.62 -0.9 38,540 - HMPREF1078_RS17995 0.63 -1.2 38,540 - HMPREF1078_RS17995 0.63 +1.7 38,540 - HMPREF1078_RS17995 0.63 +0.1 38,595 + HMPREF1078_RS17995 0.67 -1.4 38,636 + HMPREF1078_RS17995 0.70 +0.4 38,759 + HMPREF1078_RS17995 0.78 -3.8 38,760 - HMPREF1078_RS17995 0.78 -0.1 38,760 - HMPREF1078_RS17995 0.78 -0.1 38,761 + HMPREF1078_RS17995 0.78 -2.0 38,761 + HMPREF1078_RS17995 0.78 +0.6 38,762 - HMPREF1078_RS17995 0.78 -2.7 38,852 + HMPREF1078_RS17995 0.85 +0.9 38,853 - HMPREF1078_RS17995 0.85 +0.1 38,916 + HMPREF1078_RS17995 0.89 +0.7 38,923 - HMPREF1078_RS17995 0.90 -1.7 38,969 - +3.6 39,089 - -1.3 39,089 - +0.0 39,089 - +0.5 39,089 - +0.4 39,091 - +1.6 39,091 - -1.5 39,219 + HMPREF1078_RS20035 0.56 -1.4 39,219 + HMPREF1078_RS20035 0.56 +1.2 39,219 + HMPREF1078_RS20035 0.56 -0.5 39,219 + HMPREF1078_RS20035 0.56 +0.3 39,220 - HMPREF1078_RS20035 0.56 +2.1 39,318 + +1.0 39,388 + +2.5 39,388 + +0.2 39,388 + +2.8 39,388 + +2.4 39,388 + +1.5 39,388 + +2.0 39,388 + -1.5 39,388 + -1.0 39,388 + -1.1 39,389 - -0.8 39,389 - +1.7 39,389 - -1.3 39,389 - -0.4 39,389 - +0.6 39,402 + +2.2 39,403 - -1.4 39,405 - -0.8 39,426 - +1.0 39,431 + -0.6 39,434 + +2.3 39,454 + +0.1 39,490 - -0.7 39,501 + +2.1 39,526 - -1.2 39,549 + +3.4 39,549 + -1.8 39,550 - -2.1 39,550 - -0.4 39,550 - -2.0 39,553 + -3.6 39,558 + -2.1 39,589 + -0.0 39,590 - +0.5 39,641 + HMPREF1078_RS18005 0.11 -3.0 39,642 - HMPREF1078_RS18005 0.11 +2.7 39,642 - HMPREF1078_RS18005 0.11 +0.1 39,642 - HMPREF1078_RS18005 0.11 -2.8 39,642 - HMPREF1078_RS18005 0.11 -2.4 39,656 - HMPREF1078_RS18005 0.12 -0.3 39,656 - HMPREF1078_RS18005 0.12 +0.8 39,657 + HMPREF1078_RS18005 0.12 -0.9 39,657 + HMPREF1078_RS18005 0.12 +2.5 39,657 + HMPREF1078_RS18005 0.12 -1.0 39,657 + HMPREF1078_RS18005 0.12 -2.0 39,658 - HMPREF1078_RS18005 0.12 -0.0 39,680 + HMPREF1078_RS18005 0.14 +0.0 39,680 + HMPREF1078_RS18005 0.14 -2.0 39,681 - HMPREF1078_RS18005 0.14 +3.4 39,719 + HMPREF1078_RS18005 0.16 +0.7 39,724 + HMPREF1078_RS18005 0.16 +0.7 39,725 - HMPREF1078_RS18005 0.16 +4.6 39,746 - HMPREF1078_RS18005 0.17 +1.8 39,748 - HMPREF1078_RS18005 0.17 -2.0 39,750 + HMPREF1078_RS18005 0.17 -0.2 39,751 - HMPREF1078_RS18005 0.17 -0.7 39,756 + HMPREF1078_RS18005 0.18 -4.2 39,756 + HMPREF1078_RS18005 0.18 -0.2 39,757 - HMPREF1078_RS18005 0.18 -1.6 39,757 - HMPREF1078_RS18005 0.18 +0.8 39,757 - HMPREF1078_RS18005 0.18 -1.3 39,757 - HMPREF1078_RS18005 0.18 -1.3 39,758 + HMPREF1078_RS18005 0.18 -1.8 39,758 + HMPREF1078_RS18005 0.18 -1.5 39,758 + HMPREF1078_RS18005 0.18 -0.9 39,758 + HMPREF1078_RS18005 0.18 +1.5 39,759 - HMPREF1078_RS18005 0.18 -0.4 39,851 + HMPREF1078_RS18005 0.23 -2.0 39,852 - HMPREF1078_RS18005 0.23 +1.6 39,885 - HMPREF1078_RS18005 0.25 +2.0 39,885 - HMPREF1078_RS18005 0.25 +0.6 39,891 + HMPREF1078_RS18005 0.25 -0.6 39,908 + HMPREF1078_RS18005 0.26 -0.0 39,908 + HMPREF1078_RS18005 0.26 +0.5 39,909 - HMPREF1078_RS18005 0.26 -2.6 39,909 - HMPREF1078_RS18005 0.26 +0.8 39,909 - HMPREF1078_RS18005 0.26 -2.7 39,911 + HMPREF1078_RS18005 0.26 -1.3 39,917 + HMPREF1078_RS18005 0.27 +0.7 39,941 + HMPREF1078_RS18005 0.28 +1.5 39,941 + HMPREF1078_RS18005 0.28 -3.0 39,942 - HMPREF1078_RS18005 0.28 -0.0 39,942 - HMPREF1078_RS18005 0.28 -1.0 39,954 + HMPREF1078_RS18005 0.29 +0.1 39,973 + HMPREF1078_RS18005 0.30 +0.2 39,973 + HMPREF1078_RS18005 0.30 +0.6 39,974 - HMPREF1078_RS18005 0.30 -2.0 39,978 + HMPREF1078_RS18005 0.30 +0.2 39,978 + HMPREF1078_RS18005 0.30 -1.8 39,979 - HMPREF1078_RS18005 0.30 -1.2 39,980 + HMPREF1078_RS18005 0.30 -2.5 39,980 + HMPREF1078_RS18005 0.30 +2.5 39,981 - HMPREF1078_RS18005 0.30 -0.3 39,981 - HMPREF1078_RS18005 0.30 -0.7 39,981 - HMPREF1078_RS18005 0.30 +2.0 39,999 + HMPREF1078_RS18005 0.31 +0.4 39,999 + HMPREF1078_RS18005 0.31 -3.2 39,999 + HMPREF1078_RS18005 0.31 -2.3 40,000 - HMPREF1078_RS18005 0.31 -1.6 40,000 - HMPREF1078_RS18005 0.31 -0.5 40,015 - HMPREF1078_RS18005 0.32 -1.4 40,043 + HMPREF1078_RS18005 0.34 +0.6 40,043 + HMPREF1078_RS18005 0.34 -1.7 40,044 - HMPREF1078_RS18005 0.34 +1.0 40,044 - HMPREF1078_RS18005 0.34 -2.7 40,059 + HMPREF1078_RS18005 0.34 -2.0 40,079 - HMPREF1078_RS18005 0.36 -0.5 40,079 - HMPREF1078_RS18005 0.36 -2.7 40,117 + HMPREF1078_RS18005 0.38 +1.2 40,117 + HMPREF1078_RS18005 0.38 -0.5 40,118 - HMPREF1078_RS18005 0.38 -1.4 40,137 + HMPREF1078_RS18005 0.39 -2.1 40,138 - HMPREF1078_RS18005 0.39 +2.7 40,207 + HMPREF1078_RS18005 0.43 +2.6 40,260 + HMPREF1078_RS18005 0.45 +1.6 40,261 - HMPREF1078_RS18005 0.46 -0.1 40,311 + HMPREF1078_RS18005 0.48 -0.6 40,328 + HMPREF1078_RS18005 0.49 +1.5 40,333 + HMPREF1078_RS18005 0.50 -1.6 40,333 + HMPREF1078_RS18005 0.50 -0.2 40,333 + HMPREF1078_RS18005 0.50 -2.7 40,333 + HMPREF1078_RS18005 0.50 +1.0 40,333 + HMPREF1078_RS18005 0.50 -0.5 40,333 + HMPREF1078_RS18005 0.50 +0.9 40,334 - HMPREF1078_RS18005 0.50 +0.1 40,334 - HMPREF1078_RS18005 0.50 -2.1 40,334 - HMPREF1078_RS18005 0.50 -1.3 40,334 - HMPREF1078_RS18005 0.50 +1.8 40,334 - HMPREF1078_RS18005 0.50 -2.1 40,334 - HMPREF1078_RS18005 0.50 +0.5 40,356 + HMPREF1078_RS18005 0.51 -2.5 40,356 + HMPREF1078_RS18005 0.51 +0.8 40,356 + HMPREF1078_RS18005 0.51 -0.6 40,357 - HMPREF1078_RS18005 0.51 +0.3 40,357 - HMPREF1078_RS18005 0.51 +0.7 40,357 - HMPREF1078_RS18005 0.51 -0.2 40,357 - HMPREF1078_RS18005 0.51 +0.5 40,434 + HMPREF1078_RS18005 0.55 +1.8 40,434 + HMPREF1078_RS18005 0.55 +2.4 40,435 - HMPREF1078_RS18005 0.55 +0.9 40,471 + HMPREF1078_RS18005 0.57 -0.6 40,471 + HMPREF1078_RS18005 0.57 +2.1 40,472 - HMPREF1078_RS18005 0.57 -0.2 40,495 - HMPREF1078_RS18005 0.58 -1.6 40,503 - HMPREF1078_RS18005 0.59 +1.3 40,514 - HMPREF1078_RS18005 0.59 +0.0 40,551 - HMPREF1078_RS18005 0.61 +2.1 40,558 + HMPREF1078_RS18005 0.62 -2.0 40,558 + HMPREF1078_RS18005 0.62 +1.4 40,559 - HMPREF1078_RS18005 0.62 +1.7 40,562 + HMPREF1078_RS18005 0.62 +2.7 40,563 - HMPREF1078_RS18005 0.62 -0.7 40,563 - HMPREF1078_RS18005 0.62 +1.4 40,563 - HMPREF1078_RS18005 0.62 -1.4 40,563 - HMPREF1078_RS18005 0.62 -0.0 40,563 - HMPREF1078_RS18005 0.62 -3.9 40,583 + HMPREF1078_RS18005 0.63 +0.9 40,584 - HMPREF1078_RS18005 0.63 +1.1 40,587 + HMPREF1078_RS18005 0.63 +1.0 40,598 - HMPREF1078_RS18005 0.64 +2.0 40,599 + HMPREF1078_RS18005 0.64 -1.7 40,600 - HMPREF1078_RS18005 0.64 -2.0 40,634 + HMPREF1078_RS18005 0.66 -0.6 40,638 + HMPREF1078_RS18005 0.66 +1.6 40,638 + HMPREF1078_RS18005 0.66 +2.2 40,639 - HMPREF1078_RS18005 0.66 +0.4 40,646 + HMPREF1078_RS18005 0.67 -2.5 40,646 + HMPREF1078_RS18005 0.67 +1.2 40,647 - HMPREF1078_RS18005 0.67 +1.2 40,647 - HMPREF1078_RS18005 0.67 -2.4 40,664 + HMPREF1078_RS18005 0.68 -0.3 40,664 + HMPREF1078_RS18005 0.68 -0.8 40,665 - HMPREF1078_RS18005 0.68 -0.1 40,669 + HMPREF1078_RS18005 0.68 +0.8 40,675 + HMPREF1078_RS18005 0.68 -0.3 40,744 - HMPREF1078_RS18005 0.72 +0.3 40,746 + HMPREF1078_RS18005 0.72 +1.1 40,746 + HMPREF1078_RS18005 0.72 -1.5 40,747 - HMPREF1078_RS18005 0.72 -2.8 40,755 + HMPREF1078_RS18005 0.73 +2.6 40,755 + HMPREF1078_RS18005 0.73 +0.6 40,756 - HMPREF1078_RS18005 0.73 -0.8 40,756 - HMPREF1078_RS18005 0.73 +2.2 40,756 - HMPREF1078_RS18005 0.73 +1.2 40,759 - HMPREF1078_RS18005 0.73 -0.8 40,759 - HMPREF1078_RS18005 0.73 +1.4 40,819 + HMPREF1078_RS18005 0.76 +0.3 40,820 - HMPREF1078_RS18005 0.76 +0.7 40,820 - HMPREF1078_RS18005 0.76 -0.7 40,821 + HMPREF1078_RS18005 0.76 +2.7 40,822 - HMPREF1078_RS18005 0.76 -1.8 40,848 + HMPREF1078_RS18005 0.78 -0.5 40,911 + HMPREF1078_RS18005 0.81 +0.7 40,911 + HMPREF1078_RS18005 0.81 -0.6 40,911 + HMPREF1078_RS18005 0.81 -0.0 40,912 - HMPREF1078_RS18005 0.81 +0.5 40,912 - HMPREF1078_RS18005 0.81 -1.0 40,915 + HMPREF1078_RS18005 0.82 +1.6 40,991 + HMPREF1078_RS18005 0.86 +1.8 40,991 + HMPREF1078_RS18005 0.86 -0.3 40,992 - HMPREF1078_RS18005 0.86 +1.2 40,992 - HMPREF1078_RS18005 0.86 +1.1 40,992 - HMPREF1078_RS18005 0.86 +0.3 40,992 - HMPREF1078_RS18005 0.86 +1.4 41,085 + +0.6 41,086 - -1.8 41,106 + +0.4 41,107 - +0.2 41,107 - -1.0 41,109 + +2.2 41,110 - +0.4 41,122 - -1.8 41,122 - -2.6 41,122 - -1.9 41,122 - -3.0 41,123 + -2.0 41,123 + +1.0 41,123 + +2.2 41,123 + -0.7 41,123 + -1.1 41,124 - -0.5 41,124 - +0.5 41,124 - -1.2 41,127 + +1.4 41,127 + +0.4 41,127 + -2.7 41,127 + -0.6 41,127 + -1.0 41,128 - -0.3 41,128 - -2.9 41,128 - -4.1 41,128 - -0.3 41,128 - -2.8 41,135 + -1.5 41,141 - +0.5 41,141 - +1.6 41,145 - +1.6 41,186 + -1.7 41,187 - -0.2 41,206 - -1.8 41,206 - +1.0 41,231 - -2.0 41,231 - +2.1 41,231 - -1.6 41,250 + +0.1 41,250 + +0.2 41,250 + +0.7 41,251 - -0.2 41,251 - -0.8 41,280 + +0.0 41,320 - +0.8 41,334 - -0.5 41,369 + +3.7 41,370 - +2.2 41,375 + -0.8 41,382 - +0.6 41,382 - -0.9 41,382 - +3.1 41,396 + +2.3 41,488 + +1.6 41,508 + -1.0 41,508 + -1.0 41,509 - -2.5 41,509 - -0.3 41,509 - +1.8 41,511 - +0.6 41,515 + +0.8 41,516 - -1.0 41,563 + -0.5 41,564 - -1.9 41,605 + -2.7 41,606 - -1.2 41,621 + -0.5 41,621 + +1.4 41,621 + -0.5 41,622 - +0.1 41,734 + -0.0 41,735 - +0.5 41,767 + +3.0 42,189 + HMPREF1078_RS18010 0.37 +0.7
Or see this region's nucleotide sequence