Experiment: Formate/Acetate-Sulfate (60/30-30 mM) minimal without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0967 and DVU0968 overlap by 4 nucleotides DVU0968 and DVU0969 are separated by 247 nucleotides DVU0969 and DVU0970 are separated by 2 nucleotides DVU0970 and DVU0971 overlap by 1 nucleotides
DVU0967: DVU0967 - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 1,064,266 to 1,065,279
DVU0967
DVU0968: DVU0968 - amino acid ABC transporter, ATP-binding protein (TIGR), at 1,065,276 to 1,066,016
DVU0968
DVU0969: DVU0969 - efflux protein, LysE family (TIGR), at 1,066,264 to 1,067,010
DVU0969
DVU0970: DVU0970 - lipoprotein, putative (TIGR), at 1,067,013 to 1,067,552
DVU0970
DVU0971: DVU0971 - molybdenum cofactor biosynthesis protein (TIGR), at 1,067,552 to 1,068,331
DVU0971
Position (kb)
1066
1067
1068 Strain fitness (log2 ratio)
-2
-1
0
1 at 1065.420 kb on - strand, within DVU0968 at 1065.436 kb on + strand, within DVU0968 at 1065.491 kb on + strand, within DVU0968 at 1065.554 kb on + strand, within DVU0968 at 1065.698 kb on + strand, within DVU0968 at 1065.706 kb on - strand, within DVU0968 at 1065.760 kb on - strand, within DVU0968 at 1065.760 kb on - strand, within DVU0968 at 1065.760 kb on - strand, within DVU0968 at 1065.872 kb on + strand, within DVU0968 at 1065.911 kb on - strand, within DVU0968 at 1065.928 kb on - strand, within DVU0968 at 1065.957 kb on - strand at 1065.983 kb on - strand at 1066.040 kb on - strand at 1066.143 kb on - strand at 1066.258 kb on - strand at 1066.311 kb on - strand at 1066.342 kb on - strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.387 kb on + strand, within DVU0969 at 1066.395 kb on - strand, within DVU0969 at 1066.395 kb on - strand, within DVU0969 at 1066.405 kb on - strand, within DVU0969 at 1066.427 kb on + strand, within DVU0969 at 1066.506 kb on - strand, within DVU0969 at 1066.679 kb on - strand, within DVU0969 at 1066.845 kb on + strand, within DVU0969 at 1066.853 kb on - strand, within DVU0969 at 1066.881 kb on + strand, within DVU0969 at 1066.912 kb on + strand, within DVU0969 at 1066.920 kb on - strand, within DVU0969 at 1066.930 kb on - strand, within DVU0969 at 1067.089 kb on - strand, within DVU0970 at 1067.179 kb on + strand, within DVU0970 at 1067.287 kb on + strand, within DVU0970 at 1067.474 kb on + strand, within DVU0970 at 1067.482 kb on - strand, within DVU0970 at 1067.496 kb on + strand, within DVU0970 at 1067.504 kb on - strand at 1067.597 kb on + strand at 1067.760 kb on + strand, within DVU0971 at 1067.828 kb on - strand, within DVU0971 at 1067.829 kb on + strand, within DVU0971 at 1067.908 kb on + strand, within DVU0971 at 1067.931 kb on + strand, within DVU0971 at 1067.966 kb on - strand, within DVU0971 at 1067.981 kb on + strand, within DVU0971 at 1067.981 kb on + strand, within DVU0971 at 1068.005 kb on + strand, within DVU0971
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/30-30 mM) minimal without Molybdate remove 1,065,420 - DVU0968 0.19 +0.3 1,065,436 + DVU0968 0.22 +1.1 1,065,491 + DVU0968 0.29 +0.1 1,065,554 + DVU0968 0.38 -0.1 1,065,698 + DVU0968 0.57 -1.9 1,065,706 - DVU0968 0.58 -0.2 1,065,760 - DVU0968 0.65 +0.1 1,065,760 - DVU0968 0.65 +0.2 1,065,760 - DVU0968 0.65 +0.4 1,065,872 + DVU0968 0.80 -0.0 1,065,911 - DVU0968 0.86 +0.1 1,065,928 - DVU0968 0.88 -0.3 1,065,957 - +0.2 1,065,983 - -0.0 1,066,040 - +0.1 1,066,143 - +0.4 1,066,258 - -0.2 1,066,311 - -0.1 1,066,342 - DVU0969 0.10 -0.9 1,066,387 + DVU0969 0.16 -0.4 1,066,387 + DVU0969 0.16 -0.3 1,066,387 + DVU0969 0.16 +0.1 1,066,387 + DVU0969 0.16 -0.4 1,066,387 + DVU0969 0.16 +0.1 1,066,387 + DVU0969 0.16 -0.5 1,066,395 - DVU0969 0.18 +0.0 1,066,395 - DVU0969 0.18 -0.4 1,066,405 - DVU0969 0.19 -0.2 1,066,427 + DVU0969 0.22 -0.2 1,066,506 - DVU0969 0.32 -0.2 1,066,679 - DVU0969 0.56 -1.7 1,066,845 + DVU0969 0.78 -0.0 1,066,853 - DVU0969 0.79 -0.4 1,066,881 + DVU0969 0.83 +0.0 1,066,912 + DVU0969 0.87 -0.5 1,066,920 - DVU0969 0.88 -0.9 1,066,930 - DVU0969 0.89 +0.3 1,067,089 - DVU0970 0.14 +1.0 1,067,179 + DVU0970 0.31 -1.0 1,067,287 + DVU0970 0.51 -0.2 1,067,474 + DVU0970 0.85 +0.1 1,067,482 - DVU0970 0.87 -0.2 1,067,496 + DVU0970 0.89 -0.8 1,067,504 - -0.7 1,067,597 + -0.8 1,067,760 + DVU0971 0.27 -0.1 1,067,828 - DVU0971 0.35 -0.3 1,067,829 + DVU0971 0.36 -0.8 1,067,908 + DVU0971 0.46 -0.2 1,067,931 + DVU0971 0.49 +0.3 1,067,966 - DVU0971 0.53 +0.1 1,067,981 + DVU0971 0.55 -0.4 1,067,981 + DVU0971 0.55 +0.0 1,068,005 + DVU0971 0.58 -0.4
Or see this region's nucleotide sequence