Strain Fitness in Escherichia coli Nissle 1917 around ECOLIN_RS07155

Experiment: Bas10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECOLIN_RS07145 and ECOLIN_RS07150 are separated by 206 nucleotidesECOLIN_RS07150 and ECOLIN_RS07155 are separated by 262 nucleotidesECOLIN_RS07155 and ECOLIN_RS07160 overlap by 1 nucleotides ECOLIN_RS07145: ECOLIN_RS07145 - YcgN family cysteine cluster protein, at 1,392,777 to 1,393,223 _RS07145 ECOLIN_RS07150: ECOLIN_RS07150 - hemolysin HlyE, at 1,393,430 to 1,393,753 _RS07150 ECOLIN_RS07155: ECOLIN_RS07155 - translesion error-prone DNA polymerase V autoproteolytic subunit, at 1,394,016 to 1,394,435 _RS07155 ECOLIN_RS07160: ECOLIN_RS07160 - DNA polymerase V catalytic protein, at 1,394,435 to 1,395,703 _RS07160 Position (kb) 1394 1395Strain fitness (log2 ratio) -1 0 1at 1393.919 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas10
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1,393,919 + -0.4

Or see this region's nucleotide sequence