Experiment: Pyruvate (60mM) with Na2S as sulfur source + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0445 and DVU0446 are separated by 148 nucleotides DVU0446 and DVU0447 overlap by 8 nucleotides DVU0447 and gmd are separated by 393 nucleotides
DVU0445: DVU0445 - CBS domain protein (TIGR), at 504,169 to 505,893
DVU0445
DVU0446: DVU0446 - sodium/solute symporter family protein (TIGR), at 506,042 to 507,589
DVU0446
DVU0447: DVU0447 - membrane protein, putative (TIGR), at 507,582 to 507,899
DVU0447
DVU0448: gmd - GDP-mannose 4,6-dehydratase (TIGR), at 508,293 to 509,438
gmd
Position (kb) 506
507
508 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 505.156 kb on - strand, within DVU0445 at 505.176 kb on + strand, within DVU0445 at 505.195 kb on + strand, within DVU0445 at 505.230 kb on + strand, within DVU0445 at 505.240 kb on + strand, within DVU0445 at 505.267 kb on + strand, within DVU0445 at 505.334 kb on - strand, within DVU0445 at 505.363 kb on + strand, within DVU0445 at 505.371 kb on - strand, within DVU0445 at 505.492 kb on + strand, within DVU0445 at 505.519 kb on + strand, within DVU0445 at 505.527 kb on - strand, within DVU0445 at 505.565 kb on - strand, within DVU0445 at 505.585 kb on - strand, within DVU0445 at 505.615 kb on + strand, within DVU0445 at 505.627 kb on + strand, within DVU0445 at 505.724 kb on - strand at 505.754 kb on - strand at 505.777 kb on + strand at 505.846 kb on - strand at 505.897 kb on + strand at 505.995 kb on - strand at 506.039 kb on + strand at 506.109 kb on - strand at 506.207 kb on + strand, within DVU0446 at 506.207 kb on + strand, within DVU0446 at 506.215 kb on - strand, within DVU0446 at 506.216 kb on + strand, within DVU0446 at 506.276 kb on + strand, within DVU0446 at 506.284 kb on - strand, within DVU0446 at 506.284 kb on - strand, within DVU0446 at 506.284 kb on - strand, within DVU0446 at 506.338 kb on + strand, within DVU0446 at 506.346 kb on - strand, within DVU0446 at 506.406 kb on + strand, within DVU0446 at 506.475 kb on + strand, within DVU0446 at 506.475 kb on - strand, within DVU0446 at 506.490 kb on + strand, within DVU0446 at 506.543 kb on + strand, within DVU0446 at 506.551 kb on - strand, within DVU0446 at 506.558 kb on - strand, within DVU0446 at 506.693 kb on + strand, within DVU0446 at 506.736 kb on - strand, within DVU0446 at 506.796 kb on + strand, within DVU0446 at 506.804 kb on - strand, within DVU0446 at 506.804 kb on - strand, within DVU0446 at 506.804 kb on - strand, within DVU0446 at 506.848 kb on - strand, within DVU0446 at 506.887 kb on - strand, within DVU0446 at 507.205 kb on - strand, within DVU0446 at 507.209 kb on + strand, within DVU0446 at 507.237 kb on - strand, within DVU0446 at 507.330 kb on + strand, within DVU0446 at 507.415 kb on + strand, within DVU0446 at 507.446 kb on + strand at 507.451 kb on - strand at 507.477 kb on + strand at 507.535 kb on - strand at 507.560 kb on - strand at 507.560 kb on - strand at 507.562 kb on + strand at 507.562 kb on + strand at 507.570 kb on - strand at 507.570 kb on - strand at 507.570 kb on - strand at 507.607 kb on - strand at 507.685 kb on + strand, within DVU0447 at 507.719 kb on + strand, within DVU0447 at 507.782 kb on + strand, within DVU0447 at 507.800 kb on + strand, within DVU0447 at 507.811 kb on + strand, within DVU0447 at 507.819 kb on - strand, within DVU0447 at 507.863 kb on - strand, within DVU0447 at 507.898 kb on - strand at 507.907 kb on + strand at 507.915 kb on - strand at 507.917 kb on - strand at 507.998 kb on - strand at 507.998 kb on - strand at 508.016 kb on + strand at 508.024 kb on - strand at 508.024 kb on - strand at 508.048 kb on - strand at 508.053 kb on - strand at 508.080 kb on + strand at 508.088 kb on - strand at 508.374 kb on - strand at 508.536 kb on + strand, within gmd at 508.544 kb on - strand, within gmd
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (60mM) with Na2S as sulfur source + 0.1% Yeast Extract remove 505,156 - DVU0445 0.57 -0.4 505,176 + DVU0445 0.58 -1.0 505,195 + DVU0445 0.59 +0.2 505,230 + DVU0445 0.62 -5.7 505,240 + DVU0445 0.62 -0.2 505,267 + DVU0445 0.64 -0.2 505,334 - DVU0445 0.68 -1.4 505,363 + DVU0445 0.69 +0.6 505,371 - DVU0445 0.70 -0.2 505,492 + DVU0445 0.77 +1.3 505,519 + DVU0445 0.78 -0.6 505,527 - DVU0445 0.79 -0.6 505,565 - DVU0445 0.81 -0.3 505,585 - DVU0445 0.82 -0.1 505,615 + DVU0445 0.84 -0.7 505,627 + DVU0445 0.85 -0.1 505,724 - -1.1 505,754 - -2.0 505,777 + -0.3 505,846 - -2.0 505,897 + +0.2 505,995 - +0.4 506,039 + -0.3 506,109 - +0.1 506,207 + DVU0446 0.11 -0.1 506,207 + DVU0446 0.11 -0.1 506,215 - DVU0446 0.11 -0.2 506,216 + DVU0446 0.11 -0.3 506,276 + DVU0446 0.15 -0.6 506,284 - DVU0446 0.16 -0.4 506,284 - DVU0446 0.16 -1.5 506,284 - DVU0446 0.16 -0.7 506,338 + DVU0446 0.19 -0.2 506,346 - DVU0446 0.20 -0.2 506,406 + DVU0446 0.24 -0.4 506,475 + DVU0446 0.28 -0.7 506,475 - DVU0446 0.28 -0.1 506,490 + DVU0446 0.29 +0.1 506,543 + DVU0446 0.32 -0.5 506,551 - DVU0446 0.33 +0.3 506,558 - DVU0446 0.33 -0.8 506,693 + DVU0446 0.42 -1.3 506,736 - DVU0446 0.45 -4.9 506,796 + DVU0446 0.49 +0.2 506,804 - DVU0446 0.49 -0.7 506,804 - DVU0446 0.49 -2.3 506,804 - DVU0446 0.49 +0.2 506,848 - DVU0446 0.52 -1.7 506,887 - DVU0446 0.55 +0.1 507,205 - DVU0446 0.75 -1.3 507,209 + DVU0446 0.75 +0.6 507,237 - DVU0446 0.77 +0.0 507,330 + DVU0446 0.83 -0.3 507,415 + DVU0446 0.89 -1.0 507,446 + -0.0 507,451 - -0.1 507,477 + -1.3 507,535 - -1.2 507,560 - -1.3 507,560 - +0.0 507,562 + -0.8 507,562 + -0.3 507,570 - -1.4 507,570 - -0.1 507,570 - +0.5 507,607 - -0.2 507,685 + DVU0447 0.32 -0.7 507,719 + DVU0447 0.43 -2.6 507,782 + DVU0447 0.63 -3.6 507,800 + DVU0447 0.69 -0.5 507,811 + DVU0447 0.72 -0.0 507,819 - DVU0447 0.75 +0.5 507,863 - DVU0447 0.88 +0.1 507,898 - -0.3 507,907 + +0.5 507,915 - -0.3 507,917 - -0.2 507,998 - -0.2 507,998 - -0.3 508,016 + -1.1 508,024 - +0.1 508,024 - -0.1 508,048 - -0.5 508,053 - +1.4 508,080 + -0.4 508,088 - +0.1 508,374 - +0.6 508,536 + gmd DVU0448 0.21 -1.1 508,544 - gmd DVU0448 0.22 -1.6
Or see this region's nucleotide sequence