Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1507 and DVU1508 overlap by 1 nucleotides DVU1508 and DVU1509 are separated by 163 nucleotides DVU1509 and DVU1510 overlap by 8 nucleotides DVU1510 and DVU1511 are separated by 108 nucleotides DVU1511 and DVU1513 are separated by 249 nucleotides
DVU1507: DVU1507 - hypothetical protein (TIGR), at 1,581,129 to 1,581,479
DVU1507
DVU1508: DVU1508 - conserved hypothetical protein (TIGR), at 1,581,479 to 1,581,886
DVU1508
DVU1509: DVU1509 - conserved hypothetical protein (TIGR), at 1,582,050 to 1,582,439
DVU1509
DVU1510: DVU1510 - hypothetical protein (TIGR), at 1,582,432 to 1,582,995
DVU1510
DVU1511: DVU1511 - hypothetical protein (TIGR), at 1,583,104 to 1,583,334
DVU1511
DVU1513: DVU1513 - conserved hypothetical protein (TIGR), at 1,583,584 to 1,584,078
DVU1513
Position (kb)
1582
1583 Strain fitness (log2 ratio)
-2
-1
0
1 at 1581.992 kb on - strand at 1582.019 kb on - strand at 1582.023 kb on + strand at 1582.033 kb on + strand at 1582.429 kb on + strand at 1582.898 kb on + strand, within DVU1510 at 1583.091 kb on + strand at 1583.195 kb on + strand, within DVU1511 at 1583.281 kb on - strand, within DVU1511 at 1583.293 kb on + strand, within DVU1511 at 1583.434 kb on + strand at 1583.442 kb on - strand at 1583.498 kb on + strand at 1583.513 kb on + strand at 1583.558 kb on + strand at 1583.582 kb on + strand at 1583.582 kb on + strand at 1583.590 kb on - strand at 1583.590 kb on - strand at 1583.702 kb on + strand, within DVU1513 at 1583.703 kb on + strand, within DVU1513 at 1583.710 kb on - strand, within DVU1513 at 1583.837 kb on - strand, within DVU1513 at 1583.898 kb on + strand, within DVU1513 at 1583.906 kb on - strand, within DVU1513 at 1583.947 kb on - strand, within DVU1513
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 1,581,992 - -0.6 1,582,019 - -0.9 1,582,023 + -0.3 1,582,033 + -1.2 1,582,429 + -0.8 1,582,898 + DVU1510 0.83 -1.0 1,583,091 + -0.6 1,583,195 + DVU1511 0.39 -0.4 1,583,281 - DVU1511 0.77 +1.5 1,583,293 + DVU1511 0.82 -0.9 1,583,434 + +0.3 1,583,442 - -0.8 1,583,498 + -2.4 1,583,513 + -0.8 1,583,558 + -0.7 1,583,582 + +0.2 1,583,582 + +0.0 1,583,590 - -0.6 1,583,590 - -0.0 1,583,702 + DVU1513 0.24 +0.5 1,583,703 + DVU1513 0.24 +0.2 1,583,710 - DVU1513 0.25 -1.5 1,583,837 - DVU1513 0.51 -0.4 1,583,898 + DVU1513 0.63 -0.3 1,583,906 - DVU1513 0.65 -0.8 1,583,947 - DVU1513 0.73 -0.2
Or see this region's nucleotide sequence