Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgB and DVU0318 are separated by 638 nucleotides DVU0318 and DVU0319 are separated by 471 nucleotides
DVU0316: flgB - flagellar basal-body rod protein FlgB (TIGR), at 360,401 to 360,811
flgB
DVU0318: DVU0318 - TPR domain protein (TIGR), at 361,450 to 362,013
DVU0318
DVU0319: DVU0319 - NAD-dependent epimerase/dehydratase family protein (TIGR), at 362,485 to 363,510
DVU0319
Position (kb)
361
362
363 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 360.486 kb on - strand, within flgB at 360.525 kb on - strand, within flgB at 360.650 kb on + strand, within flgB at 360.652 kb on - strand, within flgB at 360.834 kb on + strand at 360.979 kb on + strand at 361.005 kb on + strand at 361.011 kb on + strand at 361.013 kb on - strand at 361.135 kb on + strand at 361.145 kb on + strand at 361.210 kb on + strand at 361.218 kb on - strand at 361.416 kb on + strand at 361.417 kb on + strand at 361.497 kb on - strand at 361.718 kb on - strand, within DVU0318 at 361.771 kb on - strand, within DVU0318 at 361.891 kb on + strand, within DVU0318 at 361.950 kb on - strand, within DVU0318 at 361.998 kb on - strand at 362.000 kb on - strand at 362.145 kb on + strand at 362.146 kb on + strand at 362.167 kb on + strand at 362.169 kb on - strand at 362.248 kb on + strand at 362.256 kb on - strand at 362.385 kb on + strand at 362.385 kb on + strand at 362.461 kb on - strand at 362.466 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 360,486 - flgB DVU0316 0.21 +0.5 360,525 - flgB DVU0316 0.30 -1.4 360,650 + flgB DVU0316 0.61 -1.4 360,652 - flgB DVU0316 0.61 -0.4 360,834 + -0.4 360,979 + -0.8 361,005 + +0.7 361,011 + -1.3 361,013 - -0.8 361,135 + -1.0 361,145 + -0.4 361,210 + +0.4 361,218 - -0.5 361,416 + +0.3 361,417 + -0.7 361,497 - -1.9 361,718 - DVU0318 0.48 -1.5 361,771 - DVU0318 0.57 -1.7 361,891 + DVU0318 0.78 -0.8 361,950 - DVU0318 0.89 +0.4 361,998 - -2.9 362,000 - -0.6 362,145 + -0.3 362,146 + +0.9 362,167 + +0.2 362,169 - -0.3 362,248 + -0.2 362,256 - -2.3 362,385 + +0.1 362,385 + -2.4 362,461 - +0.1 362,466 + +1.2
Or see this region's nucleotide sequence