Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0248 and DVU0249 are separated by 2 nucleotides DVU0249 and DVU0250 are separated by 307 nucleotides DVU0250 and DVU0251 are separated by 76 nucleotides
DVU0248: DVU0248 - sensory box histidine kinase, authentic point mutation (TIGR), at 281,313 to 283,421
DVU0248
DVU0249: DVU0249 - conserved hypothetical protein (TIGR), at 283,424 to 284,395
DVU0249
DVU0250: DVU0250 - hypothetical protein (TIGR), at 284,703 to 285,290
DVU0250
DVU0251: DVU0251 - membrane protein, putative (TIGR), at 285,367 to 286,329
DVU0251
Position (kb) 283
284
285 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 282.455 kb on + strand, within DVU0248 at 282.489 kb on - strand, within DVU0248 at 282.501 kb on + strand, within DVU0248 at 282.583 kb on + strand, within DVU0248 at 282.678 kb on + strand, within DVU0248 at 282.678 kb on + strand, within DVU0248 at 282.713 kb on + strand, within DVU0248 at 282.745 kb on + strand, within DVU0248 at 282.757 kb on + strand, within DVU0248 at 282.990 kb on + strand, within DVU0248 at 282.997 kb on + strand, within DVU0248 at 282.998 kb on - strand, within DVU0248 at 282.998 kb on - strand, within DVU0248 at 283.015 kb on - strand, within DVU0248 at 283.127 kb on + strand, within DVU0248 at 283.142 kb on - strand, within DVU0248 at 283.142 kb on - strand, within DVU0248 at 283.142 kb on - strand, within DVU0248 at 283.196 kb on + strand, within DVU0248 at 283.204 kb on - strand, within DVU0248 at 283.204 kb on - strand, within DVU0248 at 283.209 kb on - strand, within DVU0248 at 283.229 kb on + strand at 283.280 kb on + strand at 283.320 kb on - strand at 283.395 kb on - strand at 283.395 kb on - strand at 283.438 kb on + strand at 283.446 kb on + strand at 283.448 kb on - strand at 283.490 kb on - strand at 283.530 kb on + strand, within DVU0249 at 283.571 kb on + strand, within DVU0249 at 283.584 kb on - strand, within DVU0249 at 283.618 kb on - strand, within DVU0249 at 283.618 kb on - strand, within DVU0249 at 283.619 kb on + strand, within DVU0249 at 283.692 kb on - strand, within DVU0249 at 283.819 kb on + strand, within DVU0249 at 283.827 kb on - strand, within DVU0249 at 283.838 kb on + strand, within DVU0249 at 283.925 kb on + strand, within DVU0249 at 283.970 kb on + strand, within DVU0249 at 283.970 kb on + strand, within DVU0249 at 283.990 kb on + strand, within DVU0249 at 284.085 kb on + strand, within DVU0249 at 284.122 kb on - strand, within DVU0249 at 284.125 kb on + strand, within DVU0249 at 284.133 kb on - strand, within DVU0249 at 284.145 kb on + strand, within DVU0249 at 284.146 kb on - strand, within DVU0249 at 284.272 kb on + strand, within DVU0249 at 284.295 kb on + strand, within DVU0249 at 284.298 kb on - strand at 284.317 kb on + strand at 284.320 kb on - strand at 284.324 kb on + strand at 284.325 kb on - strand at 284.395 kb on + strand at 284.403 kb on - strand at 284.405 kb on + strand at 284.499 kb on + strand at 284.596 kb on - strand at 284.625 kb on + strand at 284.629 kb on + strand at 284.636 kb on + strand at 284.671 kb on - strand at 284.708 kb on - strand at 284.718 kb on + strand at 284.757 kb on - strand at 284.874 kb on - strand, within DVU0250 at 284.874 kb on - strand, within DVU0250 at 284.907 kb on + strand, within DVU0250 at 284.907 kb on + strand, within DVU0250 at 284.950 kb on + strand, within DVU0250 at 284.958 kb on - strand, within DVU0250 at 285.109 kb on + strand, within DVU0250 at 285.135 kb on + strand, within DVU0250 at 285.210 kb on - strand, within DVU0250 at 285.252 kb on + strand at 285.349 kb on - strand at 285.359 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 282,455 + DVU0248 0.54 -0.3 282,489 - DVU0248 0.56 -0.0 282,501 + DVU0248 0.56 -0.8 282,583 + DVU0248 0.60 +0.6 282,678 + DVU0248 0.65 -1.0 282,678 + DVU0248 0.65 -0.4 282,713 + DVU0248 0.66 -0.4 282,745 + DVU0248 0.68 -1.4 282,757 + DVU0248 0.68 +0.5 282,990 + DVU0248 0.80 +0.1 282,997 + DVU0248 0.80 +0.3 282,998 - DVU0248 0.80 +0.1 282,998 - DVU0248 0.80 -0.5 283,015 - DVU0248 0.81 -1.4 283,127 + DVU0248 0.86 -2.2 283,142 - DVU0248 0.87 -0.7 283,142 - DVU0248 0.87 -0.1 283,142 - DVU0248 0.87 -0.8 283,196 + DVU0248 0.89 -0.5 283,204 - DVU0248 0.90 -1.0 283,204 - DVU0248 0.90 +0.2 283,209 - DVU0248 0.90 -1.9 283,229 + +0.0 283,280 + +0.4 283,320 - -0.3 283,395 - -0.9 283,395 - -0.3 283,438 + +0.0 283,446 + +0.3 283,448 - -0.3 283,490 - -1.3 283,530 + DVU0249 0.11 -0.2 283,571 + DVU0249 0.15 -1.7 283,584 - DVU0249 0.16 -1.3 283,618 - DVU0249 0.20 -1.4 283,618 - DVU0249 0.20 +0.9 283,619 + DVU0249 0.20 -0.4 283,692 - DVU0249 0.28 -0.3 283,819 + DVU0249 0.41 -1.0 283,827 - DVU0249 0.41 -1.3 283,838 + DVU0249 0.43 -0.9 283,925 + DVU0249 0.52 -1.3 283,970 + DVU0249 0.56 -0.7 283,970 + DVU0249 0.56 -2.3 283,990 + DVU0249 0.58 +0.1 284,085 + DVU0249 0.68 -0.8 284,122 - DVU0249 0.72 -0.0 284,125 + DVU0249 0.72 -0.4 284,133 - DVU0249 0.73 -0.5 284,145 + DVU0249 0.74 -0.9 284,146 - DVU0249 0.74 -0.1 284,272 + DVU0249 0.87 -1.3 284,295 + DVU0249 0.90 -0.8 284,298 - -1.3 284,317 + -0.4 284,320 - -1.4 284,324 + +0.1 284,325 - +1.3 284,395 + +0.2 284,403 - -0.5 284,405 + +0.7 284,499 + +0.3 284,596 - -0.0 284,625 + -1.7 284,629 + -3.3 284,636 + +0.1 284,671 - +0.4 284,708 - -0.1 284,718 + +0.3 284,757 - +0.3 284,874 - DVU0250 0.29 -1.6 284,874 - DVU0250 0.29 -0.3 284,907 + DVU0250 0.35 -0.6 284,907 + DVU0250 0.35 -0.6 284,950 + DVU0250 0.42 -0.4 284,958 - DVU0250 0.43 -0.2 285,109 + DVU0250 0.69 -1.0 285,135 + DVU0250 0.73 -2.7 285,210 - DVU0250 0.86 -3.8 285,252 + -1.3 285,349 - -0.5 285,359 + +0.5
Or see this region's nucleotide sequence