Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0192 and DVU0193 overlap by 8 nucleotides DVU0193 and DVU0194 are separated by 16 nucleotides
DVU0192: DVU0192 - adenine specific DNA methyltransferase, putative (TIGR), at 237,390 to 238,748
DVU0192
DVU0193: DVU0193 - hypothetical protein (TIGR), at 238,741 to 239,472
DVU0193
DVU0194: DVU0194 - terminase, large subunit, putative (TIGR), at 239,489 to 241,447
DVU0194
Position (kb) 238
239
240 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 237.771 kb on + strand, within DVU0192 at 237.778 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.798 kb on - strand, within DVU0192 at 237.844 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.854 kb on - strand, within DVU0192 at 237.869 kb on - strand, within DVU0192 at 237.984 kb on + strand, within DVU0192 at 238.075 kb on + strand, within DVU0192 at 238.186 kb on + strand, within DVU0192 at 238.192 kb on + strand, within DVU0192 at 238.209 kb on - strand, within DVU0192 at 239.001 kb on + strand, within DVU0193 at 239.009 kb on - strand, within DVU0193 at 239.050 kb on + strand, within DVU0193 at 239.053 kb on - strand, within DVU0193 at 239.054 kb on - strand, within DVU0193 at 239.060 kb on + strand, within DVU0193 at 239.081 kb on + strand, within DVU0193 at 239.089 kb on - strand, within DVU0193 at 239.089 kb on - strand, within DVU0193 at 239.300 kb on + strand, within DVU0193 at 239.310 kb on + strand, within DVU0193 at 239.404 kb on + strand at 239.467 kb on + strand at 239.511 kb on + strand at 239.519 kb on - strand at 239.519 kb on - strand at 239.644 kb on + strand at 239.647 kb on - strand at 239.699 kb on - strand, within DVU0194 at 239.764 kb on - strand, within DVU0194 at 239.896 kb on + strand, within DVU0194 at 239.933 kb on - strand, within DVU0194 at 239.939 kb on - strand, within DVU0194 at 239.965 kb on + strand, within DVU0194 at 240.053 kb on - strand, within DVU0194 at 240.273 kb on - strand, within DVU0194
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 237,771 + DVU0192 0.28 -1.2 237,778 - DVU0192 0.29 -0.1 237,798 - DVU0192 0.30 -0.4 237,798 - DVU0192 0.30 -1.1 237,844 - DVU0192 0.33 -0.7 237,854 - DVU0192 0.34 -0.2 237,854 - DVU0192 0.34 -0.1 237,869 - DVU0192 0.35 -0.7 237,984 + DVU0192 0.44 +1.4 238,075 + DVU0192 0.50 -2.0 238,186 + DVU0192 0.59 -0.9 238,192 + DVU0192 0.59 -2.2 238,209 - DVU0192 0.60 -1.6 239,001 + DVU0193 0.36 -2.1 239,009 - DVU0193 0.37 -1.9 239,050 + DVU0193 0.42 -1.7 239,053 - DVU0193 0.43 -0.8 239,054 - DVU0193 0.43 -0.7 239,060 + DVU0193 0.44 -0.5 239,081 + DVU0193 0.46 -1.4 239,089 - DVU0193 0.48 -1.4 239,089 - DVU0193 0.48 -2.9 239,300 + DVU0193 0.76 -1.1 239,310 + DVU0193 0.78 -0.1 239,404 + -0.6 239,467 + -0.1 239,511 + -0.2 239,519 - -1.1 239,519 - +0.2 239,644 + -0.6 239,647 - -2.4 239,699 - DVU0194 0.11 -0.4 239,764 - DVU0194 0.14 +0.7 239,896 + DVU0194 0.21 +0.4 239,933 - DVU0194 0.23 -0.0 239,939 - DVU0194 0.23 -0.2 239,965 + DVU0194 0.24 -0.6 240,053 - DVU0194 0.29 +0.1 240,273 - DVU0194 0.40 -0.3
Or see this region's nucleotide sequence