Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3350

Experiment: MoYLS4 with DMSO 7.5%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 7.5%
3,520,932	-		DVU3349	0.31	-1.5
3,520,947	-		DVU3349	0.33	-0.5
3,521,403	-		DVU3349	0.75	-1.7
3,521,691	-				-0.4
3,521,716	-	oorD	DVU3350	0.18	+0.3
3,521,745	+	oorD	DVU3350	0.31	-1.8
3,521,851	+	oorD	DVU3350	0.76	-1.4
3,521,854	+	oorD	DVU3350	0.77	-2.9
3,521,854	+	oorD	DVU3350	0.77	-1.3
3,521,859	-	oorD	DVU3350	0.79	-1.1
3,522,051	-				-0.5
3,522,051	-				-1.0
3,522,120	-				+0.5
3,522,122	-				-1.5
3,522,122	-				-1.1
3,522,137	+				-0.0
3,522,137	+				-0.7
3,522,196	+				-0.4
3,522,209	+				-0.9
3,522,209	+				+0.6
3,522,217	-				+0.0
3,522,246	+				+0.4
3,522,254	-				-2.4
3,522,266	+				-0.3
3,522,319	-				-0.1
3,522,366	+				-0.3
3,522,367	+				+1.2
3,522,375	-				-0.8
3,522,400	-	queA	DVU3351	0.12	+0.0
3,522,401	+	queA	DVU3351	0.12	+0.7
3,522,439	-	queA	DVU3351	0.15	+0.7
3,522,480	+	queA	DVU3351	0.19	-1.4
3,522,488	-	queA	DVU3351	0.20	-1.7
3,522,488	-	queA	DVU3351	0.20	-1.2
3,522,490	-	queA	DVU3351	0.20	-0.5
3,522,490	-	queA	DVU3351	0.20	-0.2
3,522,492	+	queA	DVU3351	0.20	-0.0
3,522,513	+	queA	DVU3351	0.22	-0.7
3,522,530	+	queA	DVU3351	0.23	+0.0
3,522,558	+	queA	DVU3351	0.26	-1.3
3,522,558	+	queA	DVU3351	0.26	+0.1
3,522,565	+	queA	DVU3351	0.26	-1.3
3,522,565	+	queA	DVU3351	0.26	-2.3
3,522,565	+	queA	DVU3351	0.26	+1.1
3,522,592	-	queA	DVU3351	0.29	+0.0
3,522,592	-	queA	DVU3351	0.29	-1.1
3,522,621	+	queA	DVU3351	0.31	-0.3
3,522,653	+	queA	DVU3351	0.34	+0.3
3,522,671	-	queA	DVU3351	0.36	-0.7
3,522,680	+	queA	DVU3351	0.37	+0.1
3,522,680	+	queA	DVU3351	0.37	-0.4
3,522,688	-	queA	DVU3351	0.37	+0.0
3,522,692	+	queA	DVU3351	0.38	+0.1
3,522,694	-	queA	DVU3351	0.38	-0.5
3,522,786	+	queA	DVU3351	0.46	+0.0
3,522,813	-	queA	DVU3351	0.49	+0.1
3,522,822	+	queA	DVU3351	0.49	-1.2
3,522,832	-	queA	DVU3351	0.50	+0.5
3,522,887	-	queA	DVU3351	0.55	+0.1