Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2872 and DVU2873 are separated by 3 nucleotides DVU2873 and DVU2874 are separated by 226 nucleotides DVU2874 and DVU2875 overlap by 8 nucleotides DVU2875 and DVU2876 overlap by 4 nucleotides
DVU2872: DVU2872 - phage portal protein, lambda family (TIGR), at 2,966,622 to 2,968,322
DVU2872
DVU2873: DVU2873 - hypothetical protein (TIGR), at 2,968,326 to 2,968,601
DVU2873
DVU2874: DVU2874 - hypothetical protein (TIGR), at 2,968,828 to 2,969,256
DVU2874
DVU2875: DVU2875 - DNA-binding domain, excisionase family (TIGR), at 2,969,249 to 2,969,467
DVU2875
DVU2876: DVU2876 - terminase, large subunit, putative (TIGR), at 2,969,464 to 2,971,350
DVU2876
Position (kb)
2968
2969 Strain fitness (log2 ratio)
-2
-1
0
1 at 2967.477 kb on - strand, within DVU2872 at 2967.505 kb on - strand, within DVU2872 at 2967.516 kb on - strand, within DVU2872 at 2967.547 kb on - strand, within DVU2872 at 2967.567 kb on - strand, within DVU2872 at 2967.819 kb on + strand, within DVU2872 at 2967.969 kb on + strand, within DVU2872 at 2968.038 kb on - strand, within DVU2872 at 2968.109 kb on + strand, within DVU2872 at 2968.132 kb on - strand, within DVU2872 at 2968.160 kb on - strand at 2968.226 kb on + strand at 2968.487 kb on - strand, within DVU2873 at 2968.574 kb on + strand at 2968.582 kb on + strand at 2968.685 kb on + strand at 2968.706 kb on + strand at 2968.706 kb on + strand at 2968.778 kb on + strand at 2968.786 kb on - strand at 2968.834 kb on - strand at 2968.890 kb on + strand, within DVU2874 at 2969.011 kb on - strand, within DVU2874 at 2969.030 kb on + strand, within DVU2874 at 2969.047 kb on + strand, within DVU2874 at 2969.055 kb on - strand, within DVU2874 at 2969.081 kb on + strand, within DVU2874 at 2969.128 kb on - strand, within DVU2874 at 2969.142 kb on + strand, within DVU2874 at 2969.150 kb on - strand, within DVU2874 at 2969.152 kb on + strand, within DVU2874 at 2969.152 kb on + strand, within DVU2874 at 2969.193 kb on - strand, within DVU2874 at 2969.328 kb on - strand, within DVU2875 at 2969.405 kb on + strand, within DVU2875 at 2969.411 kb on - strand, within DVU2875 at 2969.415 kb on + strand, within DVU2875 at 2969.415 kb on + strand, within DVU2875 at 2969.496 kb on + strand at 2969.562 kb on + strand at 2969.570 kb on - strand at 2969.577 kb on + strand at 2969.577 kb on + strand at 2969.584 kb on + strand at 2969.585 kb on - strand at 2969.585 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 2,967,477 - DVU2872 0.50 +0.0 2,967,505 - DVU2872 0.52 +0.2 2,967,516 - DVU2872 0.53 -0.9 2,967,547 - DVU2872 0.54 -0.5 2,967,567 - DVU2872 0.56 -0.1 2,967,819 + DVU2872 0.70 +0.2 2,967,969 + DVU2872 0.79 -0.5 2,968,038 - DVU2872 0.83 -0.5 2,968,109 + DVU2872 0.87 -0.2 2,968,132 - DVU2872 0.89 -0.3 2,968,160 - -0.2 2,968,226 + +0.4 2,968,487 - DVU2873 0.58 -1.3 2,968,574 + +0.0 2,968,582 + +0.3 2,968,685 + -0.7 2,968,706 + -0.2 2,968,706 + +1.2 2,968,778 + +0.9 2,968,786 - +0.7 2,968,834 - +0.0 2,968,890 + DVU2874 0.14 +0.2 2,969,011 - DVU2874 0.43 -0.9 2,969,030 + DVU2874 0.47 -0.9 2,969,047 + DVU2874 0.51 -0.7 2,969,055 - DVU2874 0.53 +0.4 2,969,081 + DVU2874 0.59 -0.2 2,969,128 - DVU2874 0.70 -0.4 2,969,142 + DVU2874 0.73 +0.0 2,969,150 - DVU2874 0.75 +0.1 2,969,152 + DVU2874 0.76 +0.9 2,969,152 + DVU2874 0.76 -1.4 2,969,193 - DVU2874 0.85 -0.2 2,969,328 - DVU2875 0.36 -1.2 2,969,405 + DVU2875 0.71 -2.2 2,969,411 - DVU2875 0.74 -0.9 2,969,415 + DVU2875 0.76 -0.3 2,969,415 + DVU2875 0.76 -1.0 2,969,496 + +0.1 2,969,562 + -0.1 2,969,570 - -0.9 2,969,577 + -0.0 2,969,577 + -0.5 2,969,584 + -0.3 2,969,585 - -2.2 2,969,585 - -0.7
Or see this region's nucleotide sequence