Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2515

Experiment: MoYLS4 with DMSO 7.5%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 7.5%
2,627,537	+	pyk	DVU2514	0.30	-2.5
2,627,584	+	pyk	DVU2514	0.33	-1.2
2,627,603	+	pyk	DVU2514	0.34	-2.0
2,627,629	+	pyk	DVU2514	0.36	-1.6
2,627,695	-	pyk	DVU2514	0.41	-2.3
2,627,696	-	pyk	DVU2514	0.41	-1.6
2,627,728	-	pyk	DVU2514	0.43	-4.6
2,627,798	+	pyk	DVU2514	0.48	-1.0
2,627,950	+	pyk	DVU2514	0.59	-4.9
2,627,955	+	pyk	DVU2514	0.59	-4.1
2,628,014	-	pyk	DVU2514	0.63	-3.3
2,628,024	-	pyk	DVU2514	0.64	-3.6
2,628,024	-	pyk	DVU2514	0.64	-2.9
2,628,024	-	pyk	DVU2514	0.64	-1.5
2,628,043	-	pyk	DVU2514	0.66	-1.2
2,628,121	+	pyk	DVU2514	0.71	-1.5
2,628,121	+	pyk	DVU2514	0.71	-3.9
2,628,216	+	pyk	DVU2514	0.78	-2.8
2,628,216	+	pyk	DVU2514	0.78	-3.0
2,628,216	+	pyk	DVU2514	0.78	-3.1
2,628,325	+	pyk	DVU2514	0.86	-2.6
2,628,333	-	pyk	DVU2514	0.86	-2.4
2,628,379	+	pyk	DVU2514	0.89	-4.2
2,628,387	-	pyk	DVU2514	0.90	-1.5
2,628,391	+				-1.0
2,628,401	-				-3.6
2,628,505	-				-4.6
2,628,505	-				+1.3
2,628,505	-				-1.8
2,628,583	-				-0.6
2,628,718	-		DVU2515	0.18	-1.5
2,628,721	+		DVU2515	0.18	-0.4
2,628,778	+		DVU2515	0.23	-1.1
2,629,076	+		DVU2515	0.52	-0.6
2,629,197	-		DVU2515	0.63	-1.5
2,629,252	-		DVU2515	0.68	-1.2
2,629,255	+		DVU2515	0.69	-1.1
2,629,312	+		DVU2515	0.74	-1.1
2,629,331	+		DVU2515	0.76	+0.4
2,629,339	-		DVU2515	0.77	-1.5
2,629,339	-		DVU2515	0.77	-1.2
2,629,435	-		DVU2515	0.86	-0.9
2,629,489	-				-1.6
2,629,494	-				-1.9
2,629,505	-				+0.7
2,629,521	+				+0.9
2,629,596	+				-0.5
2,629,648	+				+0.5
2,629,661	-				-0.2
2,629,854	+				+0.4
2,629,862	-		DVU2516	0.12	-1.5
2,629,897	+		DVU2516	0.19	-0.4
2,629,974	-		DVU2516	0.35	+0.7
2,630,045	-		DVU2516	0.49	-0.2
2,630,059	-		DVU2516	0.52	+0.6
2,630,128	+		DVU2516	0.66	+0.1
2,630,128	+		DVU2516	0.66	+0.2
2,630,128	+		DVU2516	0.66	+0.1
2,630,128	+		DVU2516	0.66	-0.8
2,630,128	+		DVU2516	0.66	+0.5
2,630,136	-		DVU2516	0.68	-1.4
2,630,136	-		DVU2516	0.68	-0.3
2,630,136	-		DVU2516	0.68	+0.4
2,630,195	+		DVU2516	0.80	-0.5
2,630,212	+		DVU2516	0.84	-0.0
2,630,220	-		DVU2516	0.85	+0.1
2,630,240	+		DVU2516	0.89	+0.4
2,630,248	-				+0.5
2,630,296	-				+0.7
2,630,296	-				+0.1
2,630,296	-				+0.1
2,630,312	+				-1.9
2,630,312	+				+0.2
2,630,329	-				+0.2
2,630,375	-				-1.2
2,630,381	-				-0.1
2,630,406	+				-0.1
2,630,406	+				-0.0
2,630,423	+				-0.6
2,630,423	+				+0.2
2,630,470	-				-0.7
2,630,494	+				-1.2
2,630,501	+				-0.6
2,630,504	-				-1.3
2,630,504	-				+0.0
2,630,509	-				-0.1