Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2287
Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with DMSO 7.5% |
---|---|---|---|---|---|
remove | |||||
2,380,060 | + | DVU2286 | 0.74 | -0.9 | |
2,380,068 | - | DVU2286 | 0.74 | -0.0 | |
2,380,126 | - | DVU2286 | 0.75 | -2.2 | |
2,380,254 | - | DVU2286 | 0.79 | +0.5 | |
2,380,259 | - | DVU2286 | 0.79 | +1.0 | |
2,380,270 | + | DVU2286 | 0.79 | -2.8 | |
2,380,280 | + | DVU2286 | 0.80 | -0.9 | |
2,380,359 | - | DVU2286 | 0.82 | -1.6 | |
2,380,554 | + | DVU2286 | 0.87 | -1.7 | |
2,380,635 | + | DVU2286 | 0.89 | -1.6 | |
2,381,042 | - | +0.1 | |||
2,381,044 | + | +0.6 | |||
2,381,131 | + | -1.9 | |||
2,381,139 | - | -1.1 | |||
2,381,346 | - | DVU2287 | 0.30 | -1.7 | |
2,381,490 | - | DVU2287 | 0.45 | -1.8 | |
2,381,605 | + | DVU2287 | 0.57 | -0.8 | |
2,382,243 | - | DVU2288 | 0.49 | -1.1 | |
2,382,750 | - | b2488 | DVU2289 | 0.44 | -1.1 |
2,382,926 | + | b2488 | DVU2289 | 0.72 | -3.0 |
Or see this region's nucleotide sequence