Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1847 and DVU1848 are separated by 162 nucleotides DVU1848 and pcm are separated by 3 nucleotides pcm and DVU1850 are separated by 224 nucleotides DVU1850 and DVU1851 are separated by 80 nucleotides
DVU1847: DVU1847 - conserved hypothetical protein (TIGR), at 1,915,787 to 1,916,680
DVU1847
DVU1848: DVU1848 - conserved hypothetical protein (TIGR), at 1,916,843 to 1,917,436
DVU1848
DVU1849: pcm - protein-L-isoaspartate O-methyltransferase (TIGR), at 1,917,440 to 1,918,072
pcm
DVU1850: DVU1850 - CBS domain protein (TIGR), at 1,918,297 to 1,918,725
DVU1850
DVU1851: DVU1851 - peptidase, M23/M37 family (TIGR), at 1,918,806 to 1,920,128
DVU1851
Position (kb)
1917
1918
1919 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1916.770 kb on + strand at 1916.778 kb on - strand at 1916.788 kb on - strand at 1916.929 kb on + strand, within DVU1848 at 1916.946 kb on + strand, within DVU1848 at 1916.959 kb on - strand, within DVU1848 at 1917.027 kb on + strand, within DVU1848 at 1917.075 kb on + strand, within DVU1848 at 1917.208 kb on + strand, within DVU1848 at 1917.251 kb on + strand, within DVU1848 at 1917.254 kb on - strand, within DVU1848 at 1917.347 kb on + strand, within DVU1848 at 1917.424 kb on + strand at 1917.571 kb on - strand, within pcm at 1917.665 kb on - strand, within pcm at 1917.693 kb on + strand, within pcm at 1917.775 kb on + strand, within pcm at 1917.812 kb on + strand, within pcm at 1917.812 kb on + strand, within pcm at 1917.897 kb on + strand, within pcm at 1917.944 kb on - strand, within pcm at 1918.224 kb on - strand at 1918.260 kb on + strand at 1918.457 kb on - strand, within DVU1850 at 1918.584 kb on + strand, within DVU1850 at 1918.709 kb on - strand at 1918.709 kb on - strand at 1918.727 kb on + strand at 1918.802 kb on + strand at 1918.911 kb on - strand at 1919.037 kb on - strand, within DVU1851
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 1,916,770 + -0.8 1,916,778 - +0.1 1,916,788 - +0.5 1,916,929 + DVU1848 0.14 -0.3 1,916,946 + DVU1848 0.17 -0.1 1,916,959 - DVU1848 0.20 -0.4 1,917,027 + DVU1848 0.31 +2.0 1,917,075 + DVU1848 0.39 +0.0 1,917,208 + DVU1848 0.61 -0.1 1,917,251 + DVU1848 0.69 -0.3 1,917,254 - DVU1848 0.69 +0.4 1,917,347 + DVU1848 0.85 -0.6 1,917,424 + +0.1 1,917,571 - pcm DVU1849 0.21 -0.2 1,917,665 - pcm DVU1849 0.36 -2.7 1,917,693 + pcm DVU1849 0.40 -3.7 1,917,775 + pcm DVU1849 0.53 -1.9 1,917,812 + pcm DVU1849 0.59 -1.4 1,917,812 + pcm DVU1849 0.59 -2.3 1,917,897 + pcm DVU1849 0.72 -1.7 1,917,944 - pcm DVU1849 0.80 +0.8 1,918,224 - +0.2 1,918,260 + +0.3 1,918,457 - DVU1850 0.37 -0.1 1,918,584 + DVU1850 0.67 +0.4 1,918,709 - -0.2 1,918,709 - -0.0 1,918,727 + -0.7 1,918,802 + +0.6 1,918,911 - +0.0 1,919,037 - DVU1851 0.17 -1.5
Or see this region's nucleotide sequence