Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tRNA-Arg and DVU1694 are separated by 98 nucleotides DVU1694 and DVU1695 are separated by 15 nucleotides DVU1695 and DVU1696 overlap by 8 nucleotides DVU1696 and DVU1697 are separated by 2 nucleotides DVU1697 and DORF12810 are separated by 7 nucleotides
DVU_tRNA-Arg-4: tRNA-Arg - tRNA with anticodon CCT for Arg (VIMSS-AUTO), at 1,770,704 to 1,770,780
tRNA-Arg
DVU1694: DVU1694 - C4-type zinc finger protein, DksA/TraR family (TIGR), at 1,770,879 to 1,771,088
DVU1694
DVU1695: DVU1695 - tail fiber assembly protein, putative (TIGR), at 1,771,104 to 1,771,613
DVU1695
DVU1696: DVU1696 - hypothetical protein (TIGR), at 1,771,606 to 1,771,974
DVU1696
DVU1697: DVU1697 - hypothetical protein (TIGR), at 1,771,977 to 1,772,234
DVU1697
DORF12810: DORF12810 - no description, at 1,772,242 to 1,773,051
DORF12810
Position (kb)
1771
1772 Strain fitness (log2 ratio)
-2
-1
0
1 at 1770.871 kb on + strand at 1770.881 kb on + strand at 1770.900 kb on - strand, within DVU1694 at 1770.927 kb on - strand, within DVU1694 at 1770.936 kb on + strand, within DVU1694 at 1770.945 kb on - strand, within DVU1694 at 1771.052 kb on - strand, within DVU1694 at 1771.059 kb on + strand, within DVU1694 at 1771.124 kb on - strand at 1771.124 kb on - strand at 1771.137 kb on - strand at 1771.183 kb on - strand, within DVU1695 at 1771.353 kb on - strand, within DVU1695 at 1771.353 kb on - strand, within DVU1695 at 1771.353 kb on - strand, within DVU1695 at 1771.492 kb on + strand, within DVU1695 at 1771.519 kb on + strand, within DVU1695 at 1771.527 kb on - strand, within DVU1695 at 1771.527 kb on - strand, within DVU1695 at 1771.622 kb on + strand at 1771.628 kb on - strand at 1771.630 kb on - strand at 1771.638 kb on - strand at 1771.715 kb on + strand, within DVU1696 at 1771.742 kb on + strand, within DVU1696 at 1772.515 kb on - strand, within DORF12810 at 1772.537 kb on + strand, within DORF12810 at 1772.635 kb on - strand, within DORF12810 at 1772.677 kb on + strand, within DORF12810 at 1772.769 kb on + strand, within DORF12810 at 1772.834 kb on - strand, within DORF12810 at 1772.850 kb on + strand, within DORF12810 at 1772.941 kb on + strand, within DORF12810 at 1772.948 kb on + strand, within DORF12810
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 1,770,871 + +0.2 1,770,881 + +0.1 1,770,900 - DVU1694 0.10 -0.1 1,770,927 - DVU1694 0.23 -1.5 1,770,936 + DVU1694 0.27 +0.2 1,770,945 - DVU1694 0.31 -0.6 1,771,052 - DVU1694 0.82 -0.4 1,771,059 + DVU1694 0.86 -0.2 1,771,124 - -2.1 1,771,124 - -0.4 1,771,137 - +0.1 1,771,183 - DVU1695 0.15 -0.1 1,771,353 - DVU1695 0.49 -0.8 1,771,353 - DVU1695 0.49 -0.3 1,771,353 - DVU1695 0.49 -0.4 1,771,492 + DVU1695 0.76 -0.2 1,771,519 + DVU1695 0.81 +1.4 1,771,527 - DVU1695 0.83 -1.8 1,771,527 - DVU1695 0.83 +0.5 1,771,622 + -0.7 1,771,628 - -0.9 1,771,630 - -0.3 1,771,638 - +0.2 1,771,715 + DVU1696 0.30 -1.1 1,771,742 + DVU1696 0.37 -0.9 1,772,515 - DORF12810 0.34 -0.1 1,772,537 + DORF12810 0.36 -1.6 1,772,635 - DORF12810 0.49 +0.2 1,772,677 + DORF12810 0.54 +0.9 1,772,769 + DORF12810 0.65 -0.1 1,772,834 - DORF12810 0.73 -1.1 1,772,850 + DORF12810 0.75 +0.3 1,772,941 + DORF12810 0.86 -0.2 1,772,948 + DORF12810 0.87 -0.2
Or see this region's nucleotide sequence