Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt atpB and DVU0919 are separated by 4 nucleotides DVU0919 and atpI overlap by 32 nucleotides atpI and DVU0921 are separated by 187 nucleotides DVU0921 and DVU0922 are separated by 42 nucleotides
DVU0918: atpB - ATP synthase F0, A subunit (TIGR), at 1,010,942 to 1,011,643
atpB
DVU0919: DVU0919 - hypothetical protein (TIGR), at 1,011,648 to 1,012,082
DVU0919
DVU0920: atpI - ATP synthase protein I (TIGR), at 1,012,051 to 1,012,329
atpI
DVU0921: DVU0921 - 5-nitroimidazole antibiotic resistance protein, putative (TIGR), at 1,012,517 to 1,012,984
DVU0921
DVU0922: DVU0922 - cytochrome c family protein (TIGR), at 1,013,027 to 1,013,584
DVU0922
Position (kb)
1012
1013 Strain fitness (log2 ratio)
-2
-1
0
1 at 1011.769 kb on - strand, within DVU0919 at 1012.105 kb on - strand, within atpI at 1012.164 kb on - strand, within atpI at 1012.176 kb on + strand, within atpI at 1012.181 kb on + strand, within atpI at 1012.183 kb on - strand, within atpI at 1012.190 kb on - strand, within atpI at 1012.245 kb on - strand, within atpI at 1012.332 kb on - strand at 1012.434 kb on + strand at 1012.556 kb on + strand at 1012.654 kb on - strand, within DVU0921 at 1012.656 kb on + strand, within DVU0921 at 1012.656 kb on + strand, within DVU0921 at 1012.671 kb on + strand, within DVU0921 at 1012.679 kb on - strand, within DVU0921 at 1012.689 kb on + strand, within DVU0921 at 1012.697 kb on - strand, within DVU0921 at 1012.747 kb on + strand, within DVU0921 at 1012.755 kb on - strand, within DVU0921 at 1012.774 kb on + strand, within DVU0921 at 1012.851 kb on - strand, within DVU0921 at 1012.860 kb on + strand, within DVU0921 at 1012.860 kb on + strand, within DVU0921 at 1012.882 kb on + strand, within DVU0921 at 1012.882 kb on + strand, within DVU0921 at 1013.030 kb on - strand at 1013.097 kb on + strand, within DVU0922 at 1013.110 kb on - strand, within DVU0922 at 1013.131 kb on - strand, within DVU0922 at 1013.167 kb on - strand, within DVU0922 at 1013.167 kb on - strand, within DVU0922 at 1013.243 kb on - strand, within DVU0922 at 1013.291 kb on - strand, within DVU0922
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 1,011,769 - DVU0919 0.28 -2.2 1,012,105 - atpI DVU0920 0.19 +0.2 1,012,164 - atpI DVU0920 0.41 -0.5 1,012,176 + atpI DVU0920 0.45 -0.4 1,012,181 + atpI DVU0920 0.47 -0.4 1,012,183 - atpI DVU0920 0.47 -2.5 1,012,190 - atpI DVU0920 0.50 +0.8 1,012,245 - atpI DVU0920 0.70 -0.4 1,012,332 - -0.1 1,012,434 + -0.9 1,012,556 + +0.5 1,012,654 - DVU0921 0.29 -0.2 1,012,656 + DVU0921 0.30 +1.3 1,012,656 + DVU0921 0.30 -0.0 1,012,671 + DVU0921 0.33 -0.5 1,012,679 - DVU0921 0.35 -0.4 1,012,689 + DVU0921 0.37 -0.7 1,012,697 - DVU0921 0.38 +1.3 1,012,747 + DVU0921 0.49 +0.2 1,012,755 - DVU0921 0.51 -0.0 1,012,774 + DVU0921 0.55 -0.4 1,012,851 - DVU0921 0.71 -0.1 1,012,860 + DVU0921 0.73 -0.4 1,012,860 + DVU0921 0.73 +1.3 1,012,882 + DVU0921 0.78 -0.3 1,012,882 + DVU0921 0.78 +0.0 1,013,030 - -0.2 1,013,097 + DVU0922 0.13 -1.3 1,013,110 - DVU0922 0.15 -0.0 1,013,131 - DVU0922 0.19 +0.9 1,013,167 - DVU0922 0.25 +0.2 1,013,167 - DVU0922 0.25 -0.8 1,013,243 - DVU0922 0.39 -0.2 1,013,291 - DVU0922 0.47 -0.2
Or see this region's nucleotide sequence