Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0671 and DVU0672 are separated by 157 nucleotides DVU0672 and DVU0673 are separated by 50 nucleotides DVU0673 and DVU0674 are separated by 348 nucleotides DVU0674 and fliY are separated by 29 nucleotides fliY and artQ are separated by 71 nucleotides
DVU0671: DVU0671 - conserved hypothetical protein (TIGR), at 743,817 to 745,454
DVU0671
DVU0672: DVU0672 - hypothetical protein (TIGR), at 745,612 to 745,764
DVU0672
DVU0673: DVU0673 - hypothetical protein (TIGR), at 745,815 to 745,982
DVU0673
DVU0674: DVU0674 - ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 746,331 to 747,146
DVU0674
DVU0675: fliY - amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR), at 747,176 to 747,997
fliY
DVU0676: artQ - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 748,069 to 748,956
artQ
Position (kb) 746
747
748 Strain fitness (log2 ratio) -2
-1
0
1 at 745.337 kb on + strand at 745.354 kb on + strand at 745.360 kb on - strand at 745.375 kb on + strand at 745.375 kb on + strand at 745.417 kb on - strand at 745.449 kb on + strand at 746.086 kb on + strand at 746.094 kb on - strand at 746.153 kb on + strand at 746.158 kb on + strand at 746.166 kb on - strand at 746.206 kb on - strand at 746.211 kb on - strand at 746.223 kb on - strand at 746.295 kb on + strand at 746.392 kb on - strand at 746.411 kb on + strand at 746.431 kb on + strand, within DVU0674 at 746.445 kb on + strand, within DVU0674 at 746.445 kb on + strand, within DVU0674 at 746.449 kb on - strand, within DVU0674 at 746.469 kb on - strand, within DVU0674 at 746.545 kb on + strand, within DVU0674 at 746.559 kb on + strand, within DVU0674 at 746.567 kb on - strand, within DVU0674 at 746.567 kb on - strand, within DVU0674 at 746.567 kb on - strand, within DVU0674 at 746.592 kb on + strand, within DVU0674 at 746.616 kb on + strand, within DVU0674 at 746.626 kb on + strand, within DVU0674 at 746.788 kb on - strand, within DVU0674 at 746.788 kb on - strand, within DVU0674 at 746.843 kb on + strand, within DVU0674 at 746.860 kb on + strand, within DVU0674 at 746.868 kb on - strand, within DVU0674 at 746.868 kb on - strand, within DVU0674 at 746.918 kb on - strand, within DVU0674 at 747.000 kb on - strand, within DVU0674 at 747.000 kb on - strand, within DVU0674 at 747.149 kb on - strand at 747.176 kb on - strand at 747.176 kb on - strand at 747.191 kb on - strand at 747.302 kb on - strand, within fliY at 747.354 kb on - strand, within fliY at 747.360 kb on - strand, within fliY at 747.454 kb on - strand, within fliY at 747.461 kb on - strand, within fliY at 747.489 kb on + strand, within fliY at 747.502 kb on + strand, within fliY at 747.527 kb on - strand, within fliY at 747.527 kb on - strand, within fliY at 747.542 kb on + strand, within fliY at 747.550 kb on - strand, within fliY at 747.691 kb on + strand, within fliY at 747.721 kb on - strand, within fliY at 747.753 kb on + strand, within fliY at 747.761 kb on - strand, within fliY at 747.761 kb on - strand, within fliY at 747.776 kb on + strand, within fliY at 747.784 kb on - strand, within fliY at 747.807 kb on - strand, within fliY at 747.859 kb on - strand, within fliY at 747.865 kb on - strand, within fliY at 747.915 kb on + strand at 747.915 kb on + strand at 747.984 kb on + strand at 748.061 kb on - strand at 748.090 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 745,337 + -0.2 745,354 + +0.7 745,360 - +0.4 745,375 + -0.2 745,375 + -0.9 745,417 - +0.8 745,449 + -1.2 746,086 + -0.6 746,094 - +0.1 746,153 + -0.2 746,158 + -0.5 746,166 - -0.2 746,206 - -0.1 746,211 - -0.6 746,223 - -0.1 746,295 + -0.2 746,392 - -0.1 746,411 + -0.3 746,431 + DVU0674 0.12 -0.8 746,445 + DVU0674 0.14 -0.4 746,445 + DVU0674 0.14 -0.6 746,449 - DVU0674 0.14 -1.1 746,469 - DVU0674 0.17 -2.0 746,545 + DVU0674 0.26 -1.1 746,559 + DVU0674 0.28 +0.5 746,567 - DVU0674 0.29 +0.5 746,567 - DVU0674 0.29 -2.0 746,567 - DVU0674 0.29 -0.7 746,592 + DVU0674 0.32 -0.4 746,616 + DVU0674 0.35 -0.6 746,626 + DVU0674 0.36 -0.2 746,788 - DVU0674 0.56 -0.2 746,788 - DVU0674 0.56 -1.4 746,843 + DVU0674 0.63 +0.0 746,860 + DVU0674 0.65 +0.2 746,868 - DVU0674 0.66 -1.0 746,868 - DVU0674 0.66 -1.1 746,918 - DVU0674 0.72 -1.5 747,000 - DVU0674 0.82 -0.7 747,000 - DVU0674 0.82 +0.1 747,149 - +0.1 747,176 - -0.1 747,176 - +0.0 747,191 - -0.0 747,302 - fliY DVU0675 0.15 -0.6 747,354 - fliY DVU0675 0.22 +0.1 747,360 - fliY DVU0675 0.22 -0.1 747,454 - fliY DVU0675 0.34 -0.0 747,461 - fliY DVU0675 0.35 -0.3 747,489 + fliY DVU0675 0.38 +0.1 747,502 + fliY DVU0675 0.40 +0.4 747,527 - fliY DVU0675 0.43 -0.3 747,527 - fliY DVU0675 0.43 +0.2 747,542 + fliY DVU0675 0.45 -0.6 747,550 - fliY DVU0675 0.45 +0.1 747,691 + fliY DVU0675 0.63 +0.6 747,721 - fliY DVU0675 0.66 -0.1 747,753 + fliY DVU0675 0.70 -0.4 747,761 - fliY DVU0675 0.71 -1.2 747,761 - fliY DVU0675 0.71 +0.0 747,776 + fliY DVU0675 0.73 -0.3 747,784 - fliY DVU0675 0.74 -0.2 747,807 - fliY DVU0675 0.77 -1.2 747,859 - fliY DVU0675 0.83 -0.2 747,865 - fliY DVU0675 0.84 +0.6 747,915 + -1.0 747,915 + +0.2 747,984 + +0.2 748,061 - +0.6 748,090 - -1.3
Or see this region's nucleotide sequence