Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0149 and DVUA0150 are separated by 192 nucleotides DVUA0150 and DVUA0151 are separated by 511 nucleotides DVUA0151 and DVUA0152 overlap by 11 nucleotides
DVUA0149: DVUA0149 - hypothetical protein (TIGR), at 196,632 to 198,416
DVUA0149
DVUA0150: DVUA0150 - bacterial extracellular solute-binding protein, family 3 (TIGR), at 198,609 to 199,346
DVUA0150
DVUA0151: DVUA0151 - DNA-binding protein, putative (TIGR), at 199,858 to 200,250
DVUA0151
DVUA0152: DVUA0152 - conserved domain protein (TIGR), at 200,240 to 201,535
DVUA0152
Position (kb) 198
199
200 Strain fitness (log2 ratio) -1
0
1 at 197.741 kb on - strand, within DVUA0149 at 197.768 kb on - strand, within DVUA0149 at 197.830 kb on - strand, within DVUA0149 at 197.859 kb on + strand, within DVUA0149 at 197.978 kb on - strand, within DVUA0149 at 197.997 kb on + strand, within DVUA0149 at 198.017 kb on - strand, within DVUA0149 at 198.071 kb on + strand, within DVUA0149 at 198.093 kb on + strand, within DVUA0149 at 198.139 kb on + strand, within DVUA0149 at 198.173 kb on + strand, within DVUA0149 at 198.173 kb on + strand, within DVUA0149 at 198.348 kb on - strand at 198.382 kb on + strand at 198.390 kb on - strand at 198.433 kb on - strand at 198.607 kb on + strand at 198.696 kb on + strand, within DVUA0150 at 198.919 kb on + strand, within DVUA0150 at 198.919 kb on + strand, within DVUA0150 at 198.927 kb on - strand, within DVUA0150 at 198.941 kb on + strand, within DVUA0150 at 199.042 kb on - strand, within DVUA0150 at 199.043 kb on + strand, within DVUA0150 at 199.107 kb on + strand, within DVUA0150 at 199.150 kb on + strand, within DVUA0150 at 199.158 kb on - strand, within DVUA0150 at 199.158 kb on - strand, within DVUA0150 at 199.278 kb on - strand at 199.364 kb on + strand at 199.395 kb on - strand at 199.435 kb on + strand at 199.443 kb on - strand at 199.488 kb on - strand at 199.561 kb on - strand at 199.564 kb on + strand at 199.700 kb on - strand at 199.700 kb on - strand at 199.857 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 197,741 - DVUA0149 0.62 -1.6 197,768 - DVUA0149 0.64 -0.1 197,830 - DVUA0149 0.67 +0.1 197,859 + DVUA0149 0.69 +0.2 197,978 - DVUA0149 0.75 -0.7 197,997 + DVUA0149 0.76 +0.1 198,017 - DVUA0149 0.78 +1.5 198,071 + DVUA0149 0.81 +0.3 198,093 + DVUA0149 0.82 -0.6 198,139 + DVUA0149 0.84 +0.3 198,173 + DVUA0149 0.86 -0.9 198,173 + DVUA0149 0.86 -0.6 198,348 - -0.3 198,382 + -0.3 198,390 - -0.5 198,433 - +0.2 198,607 + -0.4 198,696 + DVUA0150 0.12 -0.1 198,919 + DVUA0150 0.42 +0.1 198,919 + DVUA0150 0.42 -0.6 198,927 - DVUA0150 0.43 +0.6 198,941 + DVUA0150 0.45 +0.6 199,042 - DVUA0150 0.59 +1.0 199,043 + DVUA0150 0.59 -0.0 199,107 + DVUA0150 0.67 -0.2 199,150 + DVUA0150 0.73 +0.3 199,158 - DVUA0150 0.74 -0.2 199,158 - DVUA0150 0.74 +0.3 199,278 - -0.7 199,364 + +1.1 199,395 - +0.5 199,435 + +0.4 199,443 - -0.1 199,488 - +0.4 199,561 - -0.8 199,564 + -0.0 199,700 - +0.2 199,700 - -0.3 199,857 + -0.9
Or see this region's nucleotide sequence