Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0050 and DVUA0051 overlap by 4 nucleotides DVUA0051 and DVUA0052 are separated by 181 nucleotides
DVUA0050: DVUA0050 - conserved hypothetical protein (TIGR), at 61,246 to 62,502
DVUA0050
DVUA0051: DVUA0051 - glycosyl transferase, group 1 family protein (TIGR), at 62,499 to 63,887
DVUA0051
DVUA0052: DVUA0052 - conserved hypothetical protein (TIGR), at 64,069 to 64,737
DVUA0052
Position (kb) 62
63
64 Strain fitness (log2 ratio) -2
-1
0
1 at 61.543 kb on + strand, within DVUA0050 at 61.551 kb on - strand, within DVUA0050 at 61.551 kb on - strand, within DVUA0050 at 61.551 kb on - strand, within DVUA0050 at 61.672 kb on - strand, within DVUA0050 at 61.672 kb on - strand, within DVUA0050 at 61.693 kb on + strand, within DVUA0050 at 61.693 kb on + strand, within DVUA0050 at 61.693 kb on + strand, within DVUA0050 at 61.693 kb on + strand, within DVUA0050 at 61.695 kb on + strand, within DVUA0050 at 61.701 kb on - strand, within DVUA0050 at 61.708 kb on + strand, within DVUA0050 at 61.712 kb on + strand, within DVUA0050 at 61.738 kb on - strand, within DVUA0050 at 61.748 kb on - strand, within DVUA0050 at 61.844 kb on - strand, within DVUA0050 at 61.867 kb on - strand, within DVUA0050 at 61.873 kb on - strand, within DVUA0050 at 61.919 kb on - strand, within DVUA0050 at 61.922 kb on + strand, within DVUA0050 at 61.940 kb on - strand, within DVUA0050 at 61.940 kb on - strand, within DVUA0050 at 61.950 kb on - strand, within DVUA0050 at 61.993 kb on - strand, within DVUA0050 at 62.061 kb on - strand, within DVUA0050 at 62.126 kb on + strand, within DVUA0050 at 62.175 kb on + strand, within DVUA0050 at 62.175 kb on + strand, within DVUA0050 at 62.206 kb on - strand, within DVUA0050 at 62.206 kb on - strand, within DVUA0050 at 62.225 kb on + strand, within DVUA0050 at 62.355 kb on - strand, within DVUA0050 at 62.370 kb on + strand, within DVUA0050 at 62.484 kb on + strand at 62.552 kb on + strand at 62.697 kb on - strand, within DVUA0051 at 62.852 kb on + strand, within DVUA0051 at 62.983 kb on + strand, within DVUA0051 at 63.079 kb on + strand, within DVUA0051 at 63.079 kb on + strand, within DVUA0051 at 63.270 kb on + strand, within DVUA0051 at 63.323 kb on - strand, within DVUA0051 at 63.335 kb on - strand, within DVUA0051 at 63.335 kb on - strand, within DVUA0051 at 63.468 kb on + strand, within DVUA0051 at 63.469 kb on + strand, within DVUA0051 at 63.524 kb on + strand, within DVUA0051 at 63.524 kb on + strand, within DVUA0051 at 63.524 kb on + strand, within DVUA0051 at 63.592 kb on + strand, within DVUA0051 at 63.829 kb on + strand at 63.829 kb on + strand at 63.876 kb on + strand at 63.891 kb on - strand at 63.931 kb on + strand at 63.941 kb on - strand at 63.955 kb on + strand at 64.031 kb on - strand at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.208 kb on + strand, within DVUA0052 at 64.216 kb on - strand, within DVUA0052 at 64.216 kb on - strand, within DVUA0052 at 64.236 kb on + strand, within DVUA0052 at 64.236 kb on + strand, within DVUA0052 at 64.282 kb on + strand, within DVUA0052 at 64.333 kb on + strand, within DVUA0052 at 64.361 kb on - strand, within DVUA0052 at 64.364 kb on - strand, within DVUA0052 at 64.413 kb on + strand, within DVUA0052 at 64.445 kb on + strand, within DVUA0052 at 64.445 kb on + strand, within DVUA0052 at 64.458 kb on - strand, within DVUA0052 at 64.518 kb on + strand, within DVUA0052 at 64.650 kb on + strand, within DVUA0052 at 64.701 kb on + strand at 64.701 kb on + strand at 64.709 kb on - strand at 64.714 kb on + strand at 64.717 kb on - strand at 64.724 kb on + strand at 64.732 kb on + strand at 64.732 kb on + strand at 64.740 kb on - strand at 64.768 kb on - strand at 64.779 kb on - strand at 64.779 kb on - strand at 64.781 kb on + strand at 64.835 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 61,543 + DVUA0050 0.24 -0.1 61,551 - DVUA0050 0.24 -0.7 61,551 - DVUA0050 0.24 -1.1 61,551 - DVUA0050 0.24 +0.2 61,672 - DVUA0050 0.34 -0.3 61,672 - DVUA0050 0.34 -0.1 61,693 + DVUA0050 0.36 +0.4 61,693 + DVUA0050 0.36 +0.8 61,693 + DVUA0050 0.36 -0.5 61,693 + DVUA0050 0.36 -0.3 61,695 + DVUA0050 0.36 -0.4 61,701 - DVUA0050 0.36 -0.2 61,708 + DVUA0050 0.37 -0.5 61,712 + DVUA0050 0.37 -0.6 61,738 - DVUA0050 0.39 -0.3 61,748 - DVUA0050 0.40 +0.7 61,844 - DVUA0050 0.48 -0.4 61,867 - DVUA0050 0.49 +0.3 61,873 - DVUA0050 0.50 -0.3 61,919 - DVUA0050 0.54 -0.1 61,922 + DVUA0050 0.54 -1.1 61,940 - DVUA0050 0.55 +1.4 61,940 - DVUA0050 0.55 -1.2 61,950 - DVUA0050 0.56 +0.1 61,993 - DVUA0050 0.59 +0.2 62,061 - DVUA0050 0.65 -0.0 62,126 + DVUA0050 0.70 -0.0 62,175 + DVUA0050 0.74 -1.9 62,175 + DVUA0050 0.74 +0.4 62,206 - DVUA0050 0.76 +0.8 62,206 - DVUA0050 0.76 -2.4 62,225 + DVUA0050 0.78 -0.4 62,355 - DVUA0050 0.88 -1.8 62,370 + DVUA0050 0.89 +0.3 62,484 + -0.2 62,552 + -0.7 62,697 - DVUA0051 0.14 +0.0 62,852 + DVUA0051 0.25 -1.5 62,983 + DVUA0051 0.35 -0.1 63,079 + DVUA0051 0.42 +0.1 63,079 + DVUA0051 0.42 -2.3 63,270 + DVUA0051 0.56 -1.1 63,323 - DVUA0051 0.59 -1.0 63,335 - DVUA0051 0.60 -0.3 63,335 - DVUA0051 0.60 -0.2 63,468 + DVUA0051 0.70 -0.7 63,469 + DVUA0051 0.70 -0.2 63,524 + DVUA0051 0.74 -0.4 63,524 + DVUA0051 0.74 -1.4 63,524 + DVUA0051 0.74 -1.3 63,592 + DVUA0051 0.79 +0.2 63,829 + +0.2 63,829 + +0.2 63,876 + +1.6 63,891 - +0.2 63,931 + -0.5 63,941 - -0.9 63,955 + -0.9 64,031 - +0.0 64,208 + DVUA0052 0.21 -0.1 64,208 + DVUA0052 0.21 +0.2 64,208 + DVUA0052 0.21 +0.8 64,208 + DVUA0052 0.21 -0.0 64,216 - DVUA0052 0.22 -0.6 64,216 - DVUA0052 0.22 +0.5 64,236 + DVUA0052 0.25 +0.5 64,236 + DVUA0052 0.25 +0.3 64,282 + DVUA0052 0.32 +0.9 64,333 + DVUA0052 0.39 -0.2 64,361 - DVUA0052 0.44 -0.3 64,364 - DVUA0052 0.44 -0.5 64,413 + DVUA0052 0.51 +0.9 64,445 + DVUA0052 0.56 -0.6 64,445 + DVUA0052 0.56 -0.9 64,458 - DVUA0052 0.58 +0.3 64,518 + DVUA0052 0.67 +0.0 64,650 + DVUA0052 0.87 -1.4 64,701 + -0.3 64,701 + -0.4 64,709 - -0.1 64,714 + +0.7 64,717 - -0.9 64,724 + -0.0 64,732 + +0.1 64,732 + +0.0 64,740 - -0.7 64,768 - +0.6 64,779 - +0.1 64,779 - -0.9 64,781 + -0.1 64,835 + -0.6
Or see this region's nucleotide sequence