Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DORF28911 and DVU0575 are separated by 304 nucleotides DVU0575 and msrB are separated by 228 nucleotides msrB and DVU0577 are separated by 366 nucleotides
DORF28911: DORF28911 - SEED: FIG00602256: hypothetical protein, at 639,220 to 639,978
DORF28911
DVU0575: DVU0575 - hypothetical protein (TIGR), at 640,283 to 640,564
DVU0575
DVU0576: msrB - peptide methionine sulfoxide reductase MsrB (TIGR), at 640,793 to 641,224
msrB
DVU0577: DVU0577 - formate dehydrogenase formation protein FdhE, putative (TIGR), at 641,591 to 642,472
DVU0577
Position (kb) 640
641
642 Strain fitness (log2 ratio) -2
-1
0
1
2 at 639.915 kb on + strand at 639.915 kb on + strand at 640.156 kb on - strand at 640.257 kb on - strand at 640.312 kb on + strand, within DVU0575 at 640.340 kb on - strand, within DVU0575 at 640.350 kb on - strand, within DVU0575 at 640.361 kb on + strand, within DVU0575 at 640.400 kb on - strand, within DVU0575 at 640.417 kb on + strand, within DVU0575 at 640.541 kb on - strand at 640.541 kb on - strand at 640.641 kb on - strand at 640.642 kb on - strand at 640.690 kb on + strand at 640.748 kb on - strand at 640.784 kb on - strand at 640.817 kb on + strand at 640.897 kb on + strand, within msrB at 640.897 kb on + strand, within msrB at 640.905 kb on - strand, within msrB at 640.905 kb on - strand, within msrB at 641.021 kb on + strand, within msrB at 641.029 kb on - strand, within msrB at 641.030 kb on + strand, within msrB at 641.146 kb on + strand, within msrB at 641.162 kb on - strand, within msrB at 641.162 kb on - strand, within msrB at 641.162 kb on - strand, within msrB at 641.274 kb on + strand at 641.286 kb on + strand at 641.326 kb on + strand at 641.326 kb on + strand at 641.334 kb on - strand at 641.334 kb on - strand at 641.345 kb on - strand at 641.413 kb on - strand at 641.622 kb on + strand at 641.643 kb on - strand at 641.643 kb on - strand at 641.643 kb on - strand at 641.664 kb on - strand at 641.741 kb on - strand, within DVU0577 at 641.741 kb on - strand, within DVU0577 at 641.782 kb on - strand, within DVU0577 at 641.782 kb on - strand, within DVU0577 at 641.812 kb on - strand, within DVU0577 at 641.821 kb on + strand, within DVU0577 at 641.829 kb on - strand, within DVU0577 at 641.907 kb on + strand, within DVU0577 at 641.962 kb on + strand, within DVU0577 at 641.988 kb on - strand, within DVU0577 at 642.013 kb on + strand, within DVU0577 at 642.021 kb on - strand, within DVU0577 at 642.149 kb on + strand, within DVU0577 at 642.167 kb on + strand, within DVU0577 at 642.177 kb on + strand, within DVU0577 at 642.184 kb on + strand, within DVU0577 at 642.184 kb on + strand, within DVU0577 at 642.184 kb on + strand, within DVU0577 at 642.189 kb on + strand, within DVU0577 at 642.190 kb on - strand, within DVU0577 at 642.214 kb on + strand, within DVU0577
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 639,915 + +0.5 639,915 + -1.2 640,156 - -0.9 640,257 - -0.1 640,312 + DVU0575 0.10 -1.7 640,340 - DVU0575 0.20 +0.2 640,350 - DVU0575 0.24 -0.5 640,361 + DVU0575 0.28 +0.7 640,400 - DVU0575 0.41 -0.8 640,417 + DVU0575 0.48 +0.2 640,541 - -1.1 640,541 - -0.6 640,641 - -0.7 640,642 - -0.9 640,690 + +1.8 640,748 - +0.7 640,784 - +0.3 640,817 + +0.5 640,897 + msrB DVU0576 0.24 -0.8 640,897 + msrB DVU0576 0.24 +0.4 640,905 - msrB DVU0576 0.26 -1.1 640,905 - msrB DVU0576 0.26 +0.4 641,021 + msrB DVU0576 0.53 +0.9 641,029 - msrB DVU0576 0.55 +0.3 641,030 + msrB DVU0576 0.55 +0.8 641,146 + msrB DVU0576 0.82 +0.8 641,162 - msrB DVU0576 0.85 -0.3 641,162 - msrB DVU0576 0.85 -0.0 641,162 - msrB DVU0576 0.85 +0.2 641,274 + -0.8 641,286 + +0.2 641,326 + -0.4 641,326 + -0.6 641,334 - -0.1 641,334 - +0.6 641,345 - +0.0 641,413 - -0.4 641,622 + -1.0 641,643 - -0.1 641,643 - +0.2 641,643 - -0.9 641,664 - -0.4 641,741 - DVU0577 0.17 -0.6 641,741 - DVU0577 0.17 -0.6 641,782 - DVU0577 0.22 -0.1 641,782 - DVU0577 0.22 -1.2 641,812 - DVU0577 0.25 -0.3 641,821 + DVU0577 0.26 -0.1 641,829 - DVU0577 0.27 -2.3 641,907 + DVU0577 0.36 -1.0 641,962 + DVU0577 0.42 -0.8 641,988 - DVU0577 0.45 -0.8 642,013 + DVU0577 0.48 +0.2 642,021 - DVU0577 0.49 +0.7 642,149 + DVU0577 0.63 -0.5 642,167 + DVU0577 0.65 -1.5 642,177 + DVU0577 0.66 -0.6 642,184 + DVU0577 0.67 -0.0 642,184 + DVU0577 0.67 -2.3 642,184 + DVU0577 0.67 -0.4 642,189 + DVU0577 0.68 -1.1 642,190 - DVU0577 0.68 +0.2 642,214 + DVU0577 0.71 -0.1
Or see this region's nucleotide sequence