Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0216 and DVU0217 are separated by 1 nucleotides DVU0217 and DVU0218 are separated by 8 nucleotides DVU0218 and DVU0219 are separated by 8 nucleotides DVU0219 and DVU0220 overlap by 8 nucleotides
DVU0216: DVU0216 - phage baseplate assembly protein V, putative (TIGR), at 256,925 to 257,563
DVU0216
DVU0217: DVU0217 - tail protein, putative (TIGR), at 257,565 to 258,041
DVU0217
DVU0218: DVU0218 - tail protein, putative (TIGR), at 258,050 to 259,111
DVU0218
DVU0219: DVU0219 - tail protein, putative (TIGR), at 259,120 to 259,746
DVU0219
DVU0220: DVU0220 - tail fiber protein, putative (TIGR), at 259,739 to 260,755
DVU0220
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1 at 257.185 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.236 kb on - strand, within DVU0216 at 257.357 kb on + strand, within DVU0216 at 257.374 kb on - strand, within DVU0216 at 257.386 kb on + strand, within DVU0216 at 257.411 kb on - strand, within DVU0216 at 257.605 kb on + strand at 257.663 kb on - strand, within DVU0217 at 257.668 kb on - strand, within DVU0217 at 257.673 kb on - strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.906 kb on - strand, within DVU0217 at 257.913 kb on - strand, within DVU0217 at 257.927 kb on + strand, within DVU0217 at 258.082 kb on + strand at 258.221 kb on + strand, within DVU0218 at 258.274 kb on + strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.694 kb on + strand, within DVU0218 at 258.757 kb on - strand, within DVU0218 at 258.757 kb on - strand, within DVU0218 at 259.106 kb on + strand at 259.106 kb on + strand at 259.106 kb on + strand at 259.133 kb on - strand at 259.133 kb on - strand at 259.133 kb on - strand at 259.133 kb on - strand at 259.148 kb on - strand at 259.170 kb on + strand at 259.259 kb on + strand, within DVU0219 at 259.259 kb on + strand, within DVU0219 at 259.259 kb on + strand, within DVU0219 at 259.267 kb on - strand, within DVU0219 at 259.398 kb on + strand, within DVU0219 at 259.845 kb on - strand, within DVU0220 at 259.845 kb on - strand, within DVU0220 at 260.035 kb on - strand, within DVU0220 at 260.088 kb on - strand, within DVU0220
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 257,185 + DVU0216 0.41 -1.3 257,230 + DVU0216 0.48 -0.2 257,230 + DVU0216 0.48 -0.1 257,236 - DVU0216 0.49 +0.3 257,357 + DVU0216 0.68 +0.4 257,374 - DVU0216 0.70 -0.8 257,386 + DVU0216 0.72 -1.6 257,411 - DVU0216 0.76 -0.5 257,605 + +1.2 257,663 - DVU0217 0.21 +0.1 257,668 - DVU0217 0.22 -0.4 257,673 - DVU0217 0.23 +0.2 257,905 + DVU0217 0.71 +0.2 257,905 + DVU0217 0.71 -0.0 257,905 + DVU0217 0.71 -1.0 257,905 + DVU0217 0.71 -0.6 257,906 - DVU0217 0.71 -0.4 257,913 - DVU0217 0.73 -0.7 257,927 + DVU0217 0.76 -1.9 258,082 + -1.2 258,221 + DVU0218 0.16 +0.5 258,274 + DVU0218 0.21 +0.3 258,282 - DVU0218 0.22 +1.3 258,282 - DVU0218 0.22 +0.2 258,282 - DVU0218 0.22 -0.4 258,694 + DVU0218 0.61 +0.6 258,757 - DVU0218 0.67 -0.2 258,757 - DVU0218 0.67 +0.0 259,106 + +1.0 259,106 + -0.9 259,106 + +0.1 259,133 - -0.2 259,133 - +0.6 259,133 - +1.2 259,133 - +0.5 259,148 - -1.3 259,170 + -0.2 259,259 + DVU0219 0.22 +0.8 259,259 + DVU0219 0.22 +0.4 259,259 + DVU0219 0.22 -0.2 259,267 - DVU0219 0.23 +0.2 259,398 + DVU0219 0.44 -0.4 259,845 - DVU0220 0.10 -0.4 259,845 - DVU0220 0.10 -0.8 260,035 - DVU0220 0.29 -0.4 260,088 - DVU0220 0.34 +0.2
Or see this region's nucleotide sequence