Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0203 and DVU0204 are separated by 17 nucleotides DVU0204 and DVU0205 overlap by 8 nucleotides DVU0205 and DVU0206 are separated by 2 nucleotides DVU0206 and DVU0207 overlap by 4 nucleotides DVU0207 and DVU0208 overlap by 4 nucleotides DVU0208 and DVU0209 overlap by 17 nucleotides
DVU0203: DVU0203 - conserved hypothetical protein (TIGR), at 247,843 to 248,391
DVU0203
DVU0204: DVU0204 - lipoprotein, putative (TIGR), at 248,409 to 248,819
DVU0204
DVU0205: DVU0205 - hypothetical protein (TIGR), at 248,812 to 248,979
DVU0205
DVU0206: DVU0206 - hypothetical protein (TIGR), at 248,982 to 249,575
DVU0206
DVU0207: DVU0207 - hypothetical protein (TIGR), at 249,572 to 249,898
DVU0207
DVU0208: DVU0208 - hypothetical protein (TIGR), at 249,895 to 250,452
DVU0208
DVU0209: DVU0209 - conserved hypothetical protein (TIGR), at 250,436 to 250,627
DVU0209
Position (kb) 248
249
250 Strain fitness (log2 ratio) -2
-1
0
1 at 248.619 kb on + strand, within DVU0204 at 248.641 kb on + strand, within DVU0204 at 248.774 kb on + strand, within DVU0204 at 248.900 kb on - strand, within DVU0205 at 248.900 kb on - strand, within DVU0205 at 248.973 kb on + strand at 249.473 kb on - strand, within DVU0206 at 249.483 kb on - strand, within DVU0206 at 249.960 kb on + strand, within DVU0208 at 249.960 kb on + strand, within DVU0208 at 249.975 kb on + strand, within DVU0208 at 249.985 kb on - strand, within DVU0208 at 250.128 kb on + strand, within DVU0208 at 250.149 kb on - strand, within DVU0208 at 250.173 kb on - strand, within DVU0208 at 250.182 kb on - strand, within DVU0208
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 248,619 + DVU0204 0.51 +0.8 248,641 + DVU0204 0.56 +0.1 248,774 + DVU0204 0.89 +0.1 248,900 - DVU0205 0.52 +0.6 248,900 - DVU0205 0.52 +0.7 248,973 + -0.2 249,473 - DVU0206 0.83 +0.0 249,483 - DVU0206 0.84 +0.2 249,960 + DVU0208 0.12 -0.3 249,960 + DVU0208 0.12 -1.8 249,975 + DVU0208 0.14 -0.9 249,985 - DVU0208 0.16 +1.3 250,128 + DVU0208 0.42 -0.5 250,149 - DVU0208 0.46 +0.2 250,173 - DVU0208 0.50 +0.0 250,182 - DVU0208 0.51 +0.7
Or see this region's nucleotide sequence