Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0111

Experiment: MoYLS4 with DMSO 7.5%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 7.5%
143,247	+	ntrC	DVU0110	0.40	+0.0
143,253	-	ntrC	DVU0110	0.41	-0.2
143,255	-	ntrC	DVU0110	0.41	+0.3
143,257	-	ntrC	DVU0110	0.41	+0.2
143,287	+	ntrC	DVU0110	0.43	-0.7
143,287	+	ntrC	DVU0110	0.43	+0.3
143,293	-	ntrC	DVU0110	0.43	-1.5
143,323	+	ntrC	DVU0110	0.45	+0.3
143,341	-	ntrC	DVU0110	0.47	-0.7
143,346	-	ntrC	DVU0110	0.47	-0.2
143,357	+	ntrC	DVU0110	0.48	+0.4
143,362	+	ntrC	DVU0110	0.48	-1.9
143,365	-	ntrC	DVU0110	0.48	-0.3
143,370	-	ntrC	DVU0110	0.49	-1.2
143,433	+	ntrC	DVU0110	0.53	+1.2
143,526	+	ntrC	DVU0110	0.60	+0.2
143,565	+	ntrC	DVU0110	0.62	-0.2
143,568	+	ntrC	DVU0110	0.63	+1.1
143,571	-	ntrC	DVU0110	0.63	+0.1
143,584	-	ntrC	DVU0110	0.64	-0.4
143,584	-	ntrC	DVU0110	0.64	+1.0
143,591	+	ntrC	DVU0110	0.64	-1.1
143,638	-	ntrC	DVU0110	0.68	-0.6
143,689	-	ntrC	DVU0110	0.71	-1.6
143,689	-	ntrC	DVU0110	0.71	-0.8
143,782	+	ntrC	DVU0110	0.78	-0.3
143,916	+	ntrC	DVU0110	0.87	-0.9
143,916	+	ntrC	DVU0110	0.87	-0.8
143,931	-	ntrC	DVU0110	0.88	+0.5
143,944	-	ntrC	DVU0110	0.89	-1.4
143,986	+				-0.3
144,101	-				-0.7
144,183	+				-0.6
144,255	+				-0.3
144,263	+				-0.4
144,263	+				+0.4
144,271	-				+0.9
144,273	-				-0.9
144,287	+				+0.4
144,287	+				-0.1
144,300	-				+0.1
144,386	+		DVU0111	0.19	+0.7
144,497	+		DVU0111	0.32	+0.3
144,585	-		DVU0111	0.43	-0.5
144,713	+		DVU0111	0.59	+0.9
144,723	+		DVU0111	0.60	-0.0
144,730	-		DVU0111	0.61	-0.4
144,765	+		DVU0111	0.66	+0.3
144,822	+		DVU0111	0.73	+0.0
144,829	-		DVU0111	0.73	-0.8
144,845	-		DVU0111	0.75	+0.1
144,850	+		DVU0111	0.76	-0.1
144,872	+		DVU0111	0.79	+0.2
144,880	-		DVU0111	0.80	-0.1
144,887	-		DVU0111	0.81	-0.0
144,939	-		DVU0111	0.87	-0.9
144,955	+		DVU0111	0.89	+0.6
144,988	+				-0.7
144,995	-				+0.2
145,027	+				-0.8
145,074	-				-0.1
145,105	+				+0.1
145,105	+				+0.9
145,118	-				-0.6
145,163	+				+0.4
145,173	+				+0.0
145,181	-				-0.4
145,203	+	phrB	DVU0112	0.11	-0.2
145,268	+	phrB	DVU0112	0.15	-0.6
145,270	+	phrB	DVU0112	0.15	-0.7
145,380	+	phrB	DVU0112	0.23	-0.2
145,407	+	phrB	DVU0112	0.25	+0.2
145,441	+	phrB	DVU0112	0.27	+0.9
145,449	-	phrB	DVU0112	0.28	-0.4
145,478	+	phrB	DVU0112	0.30	-0.1
145,533	+	phrB	DVU0112	0.34	-0.1
145,544	-	phrB	DVU0112	0.35	-1.0
145,554	-	phrB	DVU0112	0.35	-0.2
145,573	-	phrB	DVU0112	0.37	-0.1
145,660	-	phrB	DVU0112	0.43	+0.3
145,748	+	phrB	DVU0112	0.49	+0.5
145,862	-	phrB	DVU0112	0.57	+0.0
145,873	+	phrB	DVU0112	0.58	-1.5
145,888	-	phrB	DVU0112	0.59	-0.3
145,982	-	phrB	DVU0112	0.65	-1.8
145,993	+	phrB	DVU0112	0.66	+0.3