Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0102 and fepC are separated by 32 nucleotides fepC and DVU0104 are separated by 8 nucleotides
DVU0102: DVU0102 - cation ABC transporter, periplasmic binding protein (TIGR), at 135,121 to 136,113
DVU0102
DVU0103: fepC - cation ABC transporter, ATP-binding protein, putative (TIGR), at 136,146 to 137,087
fepC
DVU0104: DVU0104 - cation ABC transporter, permease protein, putative (TIGR), at 137,096 to 137,932
DVU0104
Position (kb) 136
137
138 Strain fitness (log2 ratio) -2
-1
0
1 at 135.180 kb on - strand at 135.208 kb on - strand at 135.245 kb on - strand, within DVU0102 at 135.255 kb on + strand, within DVU0102 at 135.272 kb on - strand, within DVU0102 at 135.300 kb on - strand, within DVU0102 at 135.340 kb on - strand, within DVU0102 at 135.391 kb on + strand, within DVU0102 at 135.391 kb on + strand, within DVU0102 at 135.391 kb on + strand, within DVU0102 at 135.399 kb on - strand, within DVU0102 at 135.447 kb on + strand, within DVU0102 at 135.553 kb on - strand, within DVU0102 at 135.576 kb on + strand, within DVU0102 at 135.576 kb on + strand, within DVU0102 at 135.606 kb on - strand, within DVU0102 at 135.633 kb on + strand, within DVU0102 at 135.647 kb on + strand, within DVU0102 at 135.710 kb on - strand, within DVU0102 at 135.742 kb on - strand, within DVU0102 at 135.742 kb on - strand, within DVU0102 at 135.785 kb on - strand, within DVU0102 at 135.827 kb on + strand, within DVU0102 at 135.827 kb on + strand, within DVU0102 at 135.866 kb on + strand, within DVU0102 at 135.866 kb on + strand, within DVU0102 at 135.910 kb on - strand, within DVU0102 at 136.107 kb on + strand at 136.145 kb on + strand at 136.305 kb on + strand, within fepC at 136.364 kb on + strand, within fepC at 136.466 kb on - strand, within fepC at 136.480 kb on + strand, within fepC at 136.488 kb on - strand, within fepC at 136.497 kb on - strand, within fepC at 136.558 kb on - strand, within fepC at 136.732 kb on + strand, within fepC at 136.733 kb on - strand, within fepC at 136.847 kb on + strand, within fepC at 136.847 kb on + strand, within fepC at 136.847 kb on + strand, within fepC at 136.881 kb on + strand, within fepC at 136.920 kb on + strand, within fepC at 136.953 kb on - strand, within fepC at 136.955 kb on + strand, within fepC at 136.960 kb on + strand, within fepC at 136.990 kb on - strand, within fepC at 136.990 kb on - strand, within fepC at 137.081 kb on + strand at 137.129 kb on + strand at 137.148 kb on - strand at 137.190 kb on - strand, within DVU0104 at 137.286 kb on + strand, within DVU0104 at 137.453 kb on - strand, within DVU0104 at 137.455 kb on + strand, within DVU0104 at 137.467 kb on + strand, within DVU0104 at 137.500 kb on + strand, within DVU0104 at 137.545 kb on + strand, within DVU0104 at 137.617 kb on + strand, within DVU0104 at 137.625 kb on - strand, within DVU0104 at 137.625 kb on - strand, within DVU0104 at 137.625 kb on - strand, within DVU0104 at 137.644 kb on + strand, within DVU0104 at 137.686 kb on + strand, within DVU0104 at 137.694 kb on - strand, within DVU0104 at 137.801 kb on - strand, within DVU0104 at 137.881 kb on + strand at 137.896 kb on + strand at 137.896 kb on + strand at 138.062 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 135,180 - +0.7 135,208 - -0.8 135,245 - DVU0102 0.12 +0.3 135,255 + DVU0102 0.13 +0.3 135,272 - DVU0102 0.15 -0.6 135,300 - DVU0102 0.18 -0.6 135,340 - DVU0102 0.22 +0.0 135,391 + DVU0102 0.27 -0.2 135,391 + DVU0102 0.27 +0.2 135,391 + DVU0102 0.27 +0.1 135,399 - DVU0102 0.28 +0.0 135,447 + DVU0102 0.33 +0.0 135,553 - DVU0102 0.44 -0.1 135,576 + DVU0102 0.46 -0.2 135,576 + DVU0102 0.46 -0.9 135,606 - DVU0102 0.49 -0.8 135,633 + DVU0102 0.52 -1.5 135,647 + DVU0102 0.53 -0.6 135,710 - DVU0102 0.59 -0.9 135,742 - DVU0102 0.63 -1.5 135,742 - DVU0102 0.63 -0.6 135,785 - DVU0102 0.67 -0.8 135,827 + DVU0102 0.71 -0.5 135,827 + DVU0102 0.71 +0.4 135,866 + DVU0102 0.75 -0.2 135,866 + DVU0102 0.75 -0.1 135,910 - DVU0102 0.79 -0.5 136,107 + -0.4 136,145 + +0.2 136,305 + fepC DVU0103 0.17 +0.0 136,364 + fepC DVU0103 0.23 -1.8 136,466 - fepC DVU0103 0.34 +0.1 136,480 + fepC DVU0103 0.35 -0.2 136,488 - fepC DVU0103 0.36 -1.5 136,497 - fepC DVU0103 0.37 +0.0 136,558 - fepC DVU0103 0.44 -1.9 136,732 + fepC DVU0103 0.62 -1.6 136,733 - fepC DVU0103 0.62 -0.4 136,847 + fepC DVU0103 0.74 +0.8 136,847 + fepC DVU0103 0.74 -0.3 136,847 + fepC DVU0103 0.74 -0.2 136,881 + fepC DVU0103 0.78 -1.2 136,920 + fepC DVU0103 0.82 +0.0 136,953 - fepC DVU0103 0.86 -0.8 136,955 + fepC DVU0103 0.86 -1.5 136,960 + fepC DVU0103 0.86 +0.2 136,990 - fepC DVU0103 0.90 -0.6 136,990 - fepC DVU0103 0.90 -0.0 137,081 + -0.1 137,129 + +0.5 137,148 - -0.7 137,190 - DVU0104 0.11 -2.1 137,286 + DVU0104 0.23 +0.2 137,453 - DVU0104 0.43 -0.4 137,455 + DVU0104 0.43 -0.9 137,467 + DVU0104 0.44 +0.1 137,500 + DVU0104 0.48 +0.4 137,545 + DVU0104 0.54 -1.0 137,617 + DVU0104 0.62 +0.3 137,625 - DVU0104 0.63 +0.0 137,625 - DVU0104 0.63 -0.0 137,625 - DVU0104 0.63 +0.2 137,644 + DVU0104 0.65 -0.8 137,686 + DVU0104 0.70 -0.5 137,694 - DVU0104 0.71 +0.4 137,801 - DVU0104 0.84 -0.4 137,881 + +0.2 137,896 + -0.0 137,896 + -0.2 138,062 + -0.8
Or see this region's nucleotide sequence