Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3002

Experiment: MoYLS4 with DMSO 7.5%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 7.5%
3,111,894	+		DVU3000	0.83	-0.5
3,111,902	+		DVU3000	0.84	+0.2
3,112,025	+				+0.6
3,112,039	+				-0.2
3,112,048	+				+1.1
3,112,073	-				-0.1
3,112,082	+				+0.2
3,112,084	+				-1.9
3,112,112	+				+0.2
3,112,122	-				+0.1
3,112,141	+				+0.2
3,112,185	-		DVU3001	0.12	-1.9
3,112,279	+		DVU3001	0.24	-0.8
3,112,285	+		DVU3001	0.25	+0.7
3,112,287	-		DVU3001	0.25	-0.6
3,112,290	+		DVU3001	0.25	+1.2
3,112,316	+		DVU3001	0.29	-0.4
3,112,316	-		DVU3001	0.29	+0.4
3,112,384	-		DVU3001	0.37	-1.1
3,112,468	-		DVU3001	0.48	+0.3
3,112,493	+		DVU3001	0.51	-1.6
3,112,525	+		DVU3001	0.55	+0.3
3,112,535	+		DVU3001	0.56	-0.1
3,112,574	+		DVU3001	0.61	-1.5
3,112,575	+		DVU3001	0.61	-0.5
3,112,582	-		DVU3001	0.62	-0.1
3,112,663	-		DVU3001	0.72	-0.5
3,112,747	-		DVU3001	0.83	+0.4
3,112,772	+		DVU3001	0.86	-0.4
3,112,787	-		DVU3001	0.88	+1.9
3,112,797	+		DVU3001	0.89	+0.4
3,112,820	-				+1.4
3,112,826	-				+0.1
3,112,841	+				-0.3
3,112,841	+				+0.3
3,112,841	+				-0.5
3,112,841	+				-0.0
3,112,849	-				-0.8
3,112,867	-				+0.3
3,112,991	-				-0.4
3,113,023	+		DVU3002	0.12	+0.9
3,113,107	-		DVU3002	0.20	-0.6
3,113,109	-		DVU3002	0.20	+0.2
3,113,201	+		DVU3002	0.28	-1.0
3,113,221	+		DVU3002	0.30	-0.7
3,113,263	+		DVU3002	0.33	+0.6
3,113,293	-		DVU3002	0.36	+0.6
3,113,359	-		DVU3002	0.42	+0.0
3,113,364	-		DVU3002	0.42	-0.8
3,113,384	-		DVU3002	0.44	-0.3
3,113,386	+		DVU3002	0.44	+0.3
3,113,396	-		DVU3002	0.45	-0.3
3,113,404	-		DVU3002	0.46	+0.8
3,113,441	+		DVU3002	0.49	-0.0
3,113,477	+		DVU3002	0.52	-0.3
3,113,477	+		DVU3002	0.52	+0.3
3,113,477	+		DVU3002	0.52	+1.4
3,113,499	+		DVU3002	0.54	+0.5
3,113,561	+		DVU3002	0.59	+1.0
3,113,564	-		DVU3002	0.59	+0.0
3,113,630	-		DVU3002	0.65	-0.5
3,113,652	-		DVU3002	0.67	+0.2
3,113,704	+		DVU3002	0.72	+0.0
3,113,730	+		DVU3002	0.74	+0.2
3,113,742	-		DVU3002	0.75	-0.6
3,113,757	-		DVU3002	0.76	+0.3
3,113,798	-		DVU3002	0.80	-0.2
3,113,873	+		DVU3002	0.86	-0.4
3,113,882	+		DVU3002	0.87	+0.2
3,113,974	+				+0.8
3,114,053	-				+0.7
3,114,065	-				+0.5
3,114,065	-				-0.2
3,114,091	+				+0.1
3,114,195	-				+0.0
3,114,211	-		DVU3003	0.11	-0.7
3,114,230	+		DVU3003	0.13	+0.6
3,114,242	+		DVU3003	0.14	-0.5
3,114,265	+		DVU3003	0.16	-0.3
3,114,274	+		DVU3003	0.17	-1.1
3,114,282	-		DVU3003	0.18	-1.0
3,114,333	+		DVU3003	0.22	-0.1
3,114,341	-		DVU3003	0.23	-0.2
3,114,435	+		DVU3003	0.31	-1.4
3,114,509	+		DVU3003	0.38	-1.6
3,114,517	-		DVU3003	0.39	-1.7
3,114,584	-		DVU3003	0.45	+0.0
3,114,627	+		DVU3003	0.49	+0.1
3,114,635	-		DVU3003	0.49	-0.2
3,114,635	-		DVU3003	0.49	+0.7
3,114,702	+		DVU3003	0.55	+0.1
3,114,791	+		DVU3003	0.63	-1.1
3,114,799	-		DVU3003	0.64	+0.8
3,114,804	-		DVU3003	0.65	+0.2
3,114,836	+		DVU3003	0.67	-0.7
3,114,838	-		DVU3003	0.68	-0.5
3,114,951	-		DVU3003	0.78	-0.3
3,115,001	-		DVU3003	0.82	+0.0
3,115,001	-		DVU3003	0.82	-0.1
3,115,002	-		DVU3003	0.82	-0.2