Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2946
Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with DMSO 7.5% |
---|---|---|---|---|---|
remove | |||||
3,049,439 | - | DVU2945 | 0.31 | +0.6 | |
3,049,768 | + | DVU2945 | 0.69 | -1.2 | |
3,049,786 | - | DVU2945 | 0.71 | -0.1 | |
3,049,934 | + | DVU2945 | 0.89 | +0.3 | |
3,050,174 | - | +0.3 | |||
3,050,291 | + | -0.0 | |||
3,050,391 | - | +0.6 | |||
3,050,391 | - | +0.1 | |||
3,050,442 | - | +0.3 | |||
3,050,552 | - | DVU2946 | 0.54 | -0.7 | |
3,050,553 | - | DVU2946 | 0.54 | -1.6 | |
3,050,557 | - | DVU2946 | 0.56 | -0.7 | |
3,050,604 | + | DVU2946 | 0.75 | -0.1 | |
3,050,625 | - | DVU2946 | 0.84 | -1.0 | |
3,050,667 | + | +0.1 | |||
3,050,861 | + | +0.0 | |||
3,050,869 | - | +0.6 | |||
3,050,905 | - | +0.7 | |||
3,051,053 | - | DVU2947 | 0.15 | -0.7 | |
3,051,055 | - | DVU2947 | 0.15 | -1.8 | |
3,051,225 | - | DVU2947 | 0.23 | -0.6 | |
3,051,247 | + | DVU2947 | 0.24 | -0.6 | |
3,051,297 | - | DVU2947 | 0.27 | +1.9 | |
3,051,405 | + | DVU2947 | 0.32 | -0.2 | |
3,051,413 | - | DVU2947 | 0.32 | +0.2 |
Or see this region's nucleotide sequence