Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2517 and rplM are separated by 197 nucleotides rplM and rpsI are separated by 18 nucleotides rpsI and aroK-2 are separated by 551 nucleotides
DVU2517: DVU2517 - conserved hypothetical protein (TIGR), at 2,630,653 to 2,631,894
DVU2517
DVU2518: rplM - ribosomal protein L13 (TIGR), at 2,632,092 to 2,632,526
rplM
DVU2519: rpsI - ribosomal protein S9 (TIGR), at 2,632,545 to 2,632,937
rpsI
DVU2521: aroK-2 - shikimate kinase (TIGR), at 2,633,489 to 2,634,031
aroK-2
Position (kb)
2632
2633 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2631.121 kb on + strand, within DVU2517 at 2631.121 kb on + strand, within DVU2517 at 2631.122 kb on - strand, within DVU2517 at 2631.179 kb on - strand, within DVU2517 at 2631.212 kb on + strand, within DVU2517 at 2631.289 kb on - strand, within DVU2517 at 2631.308 kb on + strand, within DVU2517 at 2631.314 kb on - strand, within DVU2517 at 2631.320 kb on + strand, within DVU2517 at 2631.350 kb on + strand, within DVU2517 at 2631.452 kb on + strand, within DVU2517 at 2631.454 kb on + strand, within DVU2517 at 2631.542 kb on + strand, within DVU2517 at 2631.607 kb on - strand, within DVU2517 at 2631.689 kb on + strand, within DVU2517 at 2631.711 kb on + strand, within DVU2517 at 2631.735 kb on + strand, within DVU2517 at 2631.743 kb on + strand, within DVU2517 at 2631.751 kb on - strand, within DVU2517 at 2631.785 kb on - strand at 2631.950 kb on + strand at 2631.951 kb on - strand at 2631.951 kb on - strand at 2631.982 kb on - strand at 2633.070 kb on + strand at 2633.073 kb on + strand at 2633.180 kb on + strand at 2633.225 kb on - strand at 2633.246 kb on - strand at 2633.281 kb on - strand at 2633.355 kb on - strand at 2633.401 kb on + strand at 2633.437 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 2,631,121 + DVU2517 0.38 +0.4 2,631,121 + DVU2517 0.38 -0.6 2,631,122 - DVU2517 0.38 +0.5 2,631,179 - DVU2517 0.42 +0.2 2,631,212 + DVU2517 0.45 +0.6 2,631,289 - DVU2517 0.51 -0.5 2,631,308 + DVU2517 0.53 +0.1 2,631,314 - DVU2517 0.53 +0.0 2,631,320 + DVU2517 0.54 -0.7 2,631,350 + DVU2517 0.56 -0.1 2,631,452 + DVU2517 0.64 +0.1 2,631,454 + DVU2517 0.64 -0.2 2,631,542 + DVU2517 0.72 -0.8 2,631,607 - DVU2517 0.77 -0.0 2,631,689 + DVU2517 0.83 -2.0 2,631,711 + DVU2517 0.85 +0.1 2,631,735 + DVU2517 0.87 -1.0 2,631,743 + DVU2517 0.88 -0.2 2,631,751 - DVU2517 0.88 -1.6 2,631,785 - +0.0 2,631,950 + -0.2 2,631,951 - -1.4 2,631,951 - -0.0 2,631,982 - -0.9 2,633,070 + -0.7 2,633,073 + -0.9 2,633,180 + +1.8 2,633,225 - +0.2 2,633,246 - +1.2 2,633,281 - +1.5 2,633,355 - +0.2 2,633,401 + -0.5 2,633,437 - -1.1
Or see this region's nucleotide sequence