Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2333
Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with DMSO 7.5% |
|---|---|---|---|---|---|
| remove | |||||
| 2,428,467 | + | -0.1 | |||
| 2,428,826 | - | proC | DVU2332 | 0.29 | -1.8 |
| 2,428,842 | - | proC | DVU2332 | 0.31 | -1.0 |
| 2,428,933 | + | proC | DVU2332 | 0.43 | -3.8 |
| 2,429,115 | + | proC | DVU2332 | 0.65 | -1.3 |
| 2,429,612 | + | ndk | DVU2333 | 0.53 | -0.1 |
| 2,429,658 | + | ndk | DVU2333 | 0.64 | +0.2 |
| 2,429,666 | - | ndk | DVU2333 | 0.66 | -0.2 |
| 2,429,666 | - | ndk | DVU2333 | 0.66 | +0.1 |
| 2,429,706 | + | ndk | DVU2333 | 0.75 | +0.4 |
| 2,429,712 | + | ndk | DVU2333 | 0.77 | -0.2 |
| 2,429,859 | - | +0.8 | |||
| 2,429,923 | + | -0.2 | |||
| 2,430,000 | - | -0.7 | |||
| 2,430,069 | - | +1.0 | |||
| 2,430,072 | + | -0.8 | |||
| 2,430,180 | + | -0.7 | |||
| 2,430,227 | - | -0.7 | |||
| 2,430,268 | - | -1.2 | |||
| 2,430,297 | + | -0.3 | |||
| 2,430,501 | + | -0.7 | |||
| 2,430,509 | - | +0.9 | |||
| 2,430,612 | + | DVU2335 | 0.16 | -0.3 | |
| 2,430,665 | + | DVU2335 | 0.20 | +0.1 | |
| 2,430,673 | - | DVU2335 | 0.20 | +0.1 | |
| 2,430,728 | + | DVU2335 | 0.24 | +0.1 |
Or see this region's nucleotide sequence