Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2122

Experiment: MoYLS4 with DMSO 7.5%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with DMSO 7.5%
2,216,412	-		DVU2121	0.53	+0.4
2,216,462	+		DVU2121	0.57	-0.6
2,216,500	+		DVU2121	0.60	-0.1
2,216,582	+		DVU2121	0.67	+0.4
2,216,653	-		DVU2121	0.73	-0.2
2,216,666	+		DVU2121	0.74	+0.4
2,216,685	-		DVU2121	0.76	-0.1
2,216,737	+		DVU2121	0.80	-0.6
2,216,737	+		DVU2121	0.80	-0.7
2,216,800	+		DVU2121	0.85	-0.4
2,216,808	-		DVU2121	0.86	-0.6
2,216,930	+				+0.4
2,216,974	+				-0.6
2,217,112	+				-0.7
2,217,256	-				-0.3
2,217,335	+				+0.2
2,217,424	-				+0.2
2,217,485	+				-0.8
2,217,495	+				+0.3
2,217,524	-	cpaF	DVU2122	0.10	-1.0
2,217,539	-	cpaF	DVU2122	0.11	-0.4
2,217,692	-	cpaF	DVU2122	0.22	-1.7
2,217,764	-	cpaF	DVU2122	0.27	-0.2
2,217,787	-	cpaF	DVU2122	0.29	+0.6
2,217,859	+	cpaF	DVU2122	0.34	+0.9
2,217,882	+	cpaF	DVU2122	0.35	+0.5
2,217,900	-	cpaF	DVU2122	0.36	+0.1
2,217,922	-	cpaF	DVU2122	0.38	-0.4
2,217,960	+	cpaF	DVU2122	0.41	+1.6
2,217,963	-	cpaF	DVU2122	0.41	-0.6
2,218,030	+	cpaF	DVU2122	0.46	+0.5
2,218,103	-	cpaF	DVU2122	0.51	+0.7
2,218,112	+	cpaF	DVU2122	0.51	+0.0
2,218,120	-	cpaF	DVU2122	0.52	+1.7
2,218,134	-	cpaF	DVU2122	0.53	+0.0
2,218,144	-	cpaF	DVU2122	0.53	+0.3
2,218,151	+	cpaF	DVU2122	0.54	-0.4
2,218,169	-	cpaF	DVU2122	0.55	+0.5
2,218,462	+	cpaF	DVU2122	0.76	+0.3
2,218,522	+	cpaF	DVU2122	0.80	+0.2
2,218,525	+	cpaF	DVU2122	0.80	-0.5
2,218,571	-	cpaF	DVU2122	0.83	-0.0
2,218,685	-				+0.4
2,218,712	+				+0.2
2,218,719	-				-1.8
2,218,720	-				+0.1
2,218,733	+				-0.5
2,218,830	-				-0.6
2,218,870	-				-1.0
2,218,873	+				+0.9
2,218,880	+				-0.0
2,218,880	+				-0.6
2,218,888	-				+0.2
2,218,896	-				-1.3
2,218,903	+				-0.1
2,218,906	-				-2.1
2,218,957	-				-0.5
2,219,002	+		DVU2123	0.12	+0.5
2,219,059	+		DVU2123	0.17	+0.1
2,219,135	-		DVU2123	0.25	-0.8
2,219,150	+		DVU2123	0.27	-0.2
2,219,155	+		DVU2123	0.27	-1.1
2,219,173	-		DVU2123	0.29	-0.1
2,219,182	+		DVU2123	0.30	-0.6
2,219,187	+		DVU2123	0.31	-0.8
2,219,190	-		DVU2123	0.31	-1.8
2,219,214	+		DVU2123	0.34	+0.3
2,219,287	+		DVU2123	0.41	+0.9
2,219,297	+		DVU2123	0.42	+0.5
2,219,297	-		DVU2123	0.42	+0.3
2,219,339	+		DVU2123	0.46	-0.6
2,219,501	-		DVU2123	0.63	-0.1
2,219,506	-		DVU2123	0.64	+0.3
2,219,558	+		DVU2123	0.69	-1.0