Experiment: MoYLS4 with DMSO 7.5%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1503 and DVU1504 are separated by 4 nucleotides DVU1504 and DVU1505 are separated by 83 nucleotides DVU1505 and DVU1506 are separated by 19 nucleotides DVU1506 and DVU1507 overlap by 4 nucleotides DVU1507 and DVU1508 overlap by 1 nucleotides DVU1508 and DVU1509 are separated by 163 nucleotides
DVU1503: DVU1503 - terminase, large subunit (TIGR), at 1,578,213 to 1,579,910
DVU1503
DVU1504: DVU1504 - terminase, small subunit (TIGR), at 1,579,915 to 1,580,382
DVU1504
DVU1505: DVU1505 - holin, putative (TIGR), at 1,580,466 to 1,580,864
DVU1505
DVU1506: DVU1506 - hypothetical protein (TIGR), at 1,580,884 to 1,581,132
DVU1506
DVU1507: DVU1507 - hypothetical protein (TIGR), at 1,581,129 to 1,581,479
DVU1507
DVU1508: DVU1508 - conserved hypothetical protein (TIGR), at 1,581,479 to 1,581,886
DVU1508
DVU1509: DVU1509 - conserved hypothetical protein (TIGR), at 1,582,050 to 1,582,439
DVU1509
Position (kb)
1580
1581
1582 Strain fitness (log2 ratio)
-2
-1
0
1 at 1579.926 kb on - strand at 1579.947 kb on + strand at 1579.973 kb on + strand, within DVU1504 at 1580.028 kb on + strand, within DVU1504 at 1580.036 kb on - strand, within DVU1504 at 1580.090 kb on + strand, within DVU1504 at 1580.098 kb on - strand, within DVU1504 at 1580.105 kb on - strand, within DVU1504 at 1580.115 kb on - strand, within DVU1504 at 1580.210 kb on - strand, within DVU1504 at 1580.241 kb on - strand, within DVU1504 at 1580.323 kb on + strand, within DVU1504 at 1580.345 kb on + strand at 1580.474 kb on + strand at 1580.502 kb on + strand at 1580.541 kb on - strand, within DVU1505 at 1580.553 kb on - strand, within DVU1505 at 1580.553 kb on - strand, within DVU1505 at 1580.625 kb on + strand, within DVU1505 at 1580.796 kb on + strand, within DVU1505 at 1580.819 kb on - strand, within DVU1505 at 1581.081 kb on + strand, within DVU1506 at 1581.136 kb on - strand at 1581.182 kb on + strand, within DVU1507 at 1581.268 kb on + strand, within DVU1507 at 1581.329 kb on - strand, within DVU1507 at 1581.992 kb on - strand at 1582.019 kb on - strand at 1582.023 kb on + strand at 1582.033 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with DMSO 7.5% remove 1,579,926 - +0.0 1,579,947 + -0.2 1,579,973 + DVU1504 0.12 -0.9 1,580,028 + DVU1504 0.24 -0.2 1,580,036 - DVU1504 0.26 +0.2 1,580,090 + DVU1504 0.37 -0.8 1,580,098 - DVU1504 0.39 -0.6 1,580,105 - DVU1504 0.41 -0.1 1,580,115 - DVU1504 0.43 +0.2 1,580,210 - DVU1504 0.63 +0.3 1,580,241 - DVU1504 0.70 -0.2 1,580,323 + DVU1504 0.87 +0.1 1,580,345 + -0.3 1,580,474 + -0.9 1,580,502 + -0.2 1,580,541 - DVU1505 0.19 +0.3 1,580,553 - DVU1505 0.22 -0.1 1,580,553 - DVU1505 0.22 +0.3 1,580,625 + DVU1505 0.40 -1.0 1,580,796 + DVU1505 0.83 -0.1 1,580,819 - DVU1505 0.88 -0.2 1,581,081 + DVU1506 0.79 +0.2 1,581,136 - -2.0 1,581,182 + DVU1507 0.15 -0.4 1,581,268 + DVU1507 0.40 +0.1 1,581,329 - DVU1507 0.57 +0.3 1,581,992 - -0.0 1,582,019 - -0.3 1,582,023 + -1.3 1,582,033 + +1.1
Or see this region's nucleotide sequence